RNA–Protein interactions for RNA: ENST00000422508.6

CD109-202, Transcript of CD109 molecule, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CD109, Length 9,221 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD109-202ENST00000422508 NOLC1Q14978 699 aaKnown RBP eCLIP10.43□□□□□ -0.74
CD109-202ENST00000422508 NUTM2DQ5VT03 806 aaPredicted RBP10.43□□□□□ -0.74
CD109-202ENST00000422508 SDCCAG8Q86SQ7 713 aaPredicted RBP10.43□□□□□ -0.74
CD109-202ENST00000422508 NUTM2AQ8IVF1 878 aaPredicted RBP10.43□□□□□ -0.74
CD109-202ENST00000422508 SNX21Q969T3 373 aa10.43□□□□□ -0.74
CD109-202ENST00000422508 CRNKL1Q9BZJ0 848 aaKnown RBP10.43□□□□□ -0.74
CD109-202ENST00000422508 GON4LQ3T8J9 2241 aa10.43□□□□□ -0.74
CD109-202ENST00000422508 RTL1A6NKG5 1358 aa10.42□□□□□ -0.74
CD109-202ENST00000422508 MYH7P12883 1935 aa10.42□□□□□ -0.74
CD109-202ENST00000422508 TRIM37O94972 964 aa10.42□□□□□ -0.74
CD109-202ENST00000422508 ZSCAN22P10073 491 aaPredicted RBP10.42□□□□□ -0.74
CD109-202ENST00000422508 INTS4Q96HW7 963 aaKnown RBP10.42□□□□□ -0.74
CD109-202ENST00000422508 IFIT3O14879 490 aaKnown RBP10.42□□□□□ -0.74
CD109-202ENST00000422508 GNA11P29992 359 aa10.42□□□□□ -0.74
CD109-202ENST00000422508 INPP5BP32019 993 aa10.42□□□□□ -0.74
CD109-202ENST00000422508 GBP5Q96PP8 586 aa10.42□□□□□ -0.74
CD109-202ENST00000422508 ZKSCAN5Q9Y2L8 839 aa10.42□□□□□ -0.74
CD109-202ENST00000422508 RBBP5Q15291 538 aaKnown RBP10.42□□□□□ -0.74
CD109-202ENST00000422508 HS2ST1Q7LGA3 356 aa10.42□□□□□ -0.74
CD109-202ENST00000422508 RAB17Q9H0T7 212 aa10.42□□□□□ -0.74
CD109-202ENST00000422508 POLE3Q9NRF9 147 aa10.42□□□□□ -0.74
CD109-202ENST00000422508 GKAP1Q5VSY0 366 aaPredicted RBP10.42□□□□□ -0.74
CD109-202ENST00000422508 ERO1AQ96HE7 468 aa10.42□□□□□ -0.74
CD109-202ENST00000422508 EPS15L1Q9UBC2 864 aa10.42□□□□□ -0.74
CD109-202ENST00000422508 PPP4R1Q8TF05 950 aa10.42□□□□□ -0.74
CD109-202ENST00000422508 ZNF830Q96NB3 372 aaPredicted RBP10.42□□□□□ -0.74
CD109-202ENST00000422508 SYNJ1O43426 1573 aa10.42□□□□□ -0.74
CD109-202ENST00000422508 LAMC3Q9Y6N6 1575 aa10.42□□□□□ -0.74
CD109-202ENST00000422508 MRPS27Q92552 414 aaKnown RBP10.42□□□□□ -0.74
CD109-202ENST00000422508 SDCCAG3Q96C92 435 aa10.42□□□□□ -0.74
CD109-202ENST00000422508 TTC36A6NLP5 189 aa10.41□□□□□ -0.74
CD109-202ENST00000422508 GOLGA8CPA6NN73 597 aa10.41□□□□□ -0.74
CD109-202ENST00000422508 KRT3P12035 628 aa10.41□□□□□ -0.74
CD109-202ENST00000422508 TMEM67Q5HYA8 995 aa10.41□□□□□ -0.74
CD109-202ENST00000422508 NRBF2Q96F24 287 aa10.41□□□□□ -0.74
CD109-202ENST00000422508 EIF3CLB5ME19 914 aaKnown RBP10.41□□□□□ -0.74
CD109-202ENST00000422508 LIN9Q5TKA1 542 aa10.41□□□□□ -0.74
CD109-202ENST00000422508 EIF3CQ99613 913 aaKnown RBP10.41□□□□□ -0.74
CD109-202ENST00000422508 PUF60Q9UHX1 559 aaKnown RBP10.41□□□□□ -0.74
CD109-202ENST00000422508 PHBP35232 272 aa10.41□□□□□ -0.74
CD109-202ENST00000422508 FAM8A1Q9UBU6 413 aa10.41□□□□□ -0.74
CD109-202ENST00000422508 ERCC5P28715 1186 aaPredicted RBP10.41□□□□□ -0.74
CD109-202ENST00000422508 SHROOM2Q13796 1616 aa10.41□□□□□ -0.74
CD109-202ENST00000422508 NUTM2FA1L443 756 aa10.41□□□□□ -0.74
CD109-202ENST00000422508 PFDN6O15212 129 aa10.41□□□□□ -0.74
CD109-202ENST00000422508 SMARCC2Q8TAQ2 1214 aa10.41□□□□□ -0.74
CD109-202ENST00000422508 NCOA1Q15788 1441 aa10.41□□□□□ -0.74
CD109-202ENST00000422508 PHACTR2O75167 634 aa10.41□□□□□ -0.74
CD109-202ENST00000422508 ESR2Q92731 530 aa10.41□□□□□ -0.74
CD109-202ENST00000422508 SPC25Q9HBM1 224 aa10.41□□□□□ -0.74
CD109-202ENST00000422508 CFTRP13569 1480 aa10.41□□□□□ -0.74
CD109-202ENST00000422508 TROQ12816 1431 aaPredicted RBP10.41□□□□□ -0.74
CD109-202ENST00000422508 KIF20BQ96Q89 1820 aa10.41□□□□□ -0.74
CD109-202ENST00000422508 UQCRFS1P1P0C7P4 283 aa10.41□□□□□ -0.74
CD109-202ENST00000422508 GJB2P29033 226 aa10.41□□□□□ -0.74
CD109-202ENST00000422508 CLNS1AP54105 237 aaKnown RBP10.41□□□□□ -0.74
CD109-202ENST00000422508 RNASELQ05823 741 aaKnown RBP10.41□□□□□ -0.74
CD109-202ENST00000422508 CYP26C1Q6V0L0 522 aa10.4□□□□□ -0.74
CD109-202ENST00000422508 CCDC125Q86Z20 511 aa10.4□□□□□ -0.74
CD109-202ENST00000422508 RPGRQ92834 1020 aaKnown RBP10.4□□□□□ -0.74
CD109-202ENST00000422508 SELENOSQ9BQE4 189 aa10.4□□□□□ -0.74
CD109-202ENST00000422508 VPS18Q9P253 973 aa10.4□□□□□ -0.74
CD109-202ENST00000422508 PPFIA4O75335 1185 aa10.4□□□□□ -0.74
CD109-202ENST00000422508 NBPF6Q5VWK0 638 aa10.4□□□□□ -0.74
CD109-202ENST00000422508 NBPF4Q96M43 638 aa10.4□□□□□ -0.74
CD109-202ENST00000422508 ORC6Q9Y5N6 252 aa10.4□□□□□ -0.74
CD109-202ENST00000422508 MYH8P13535 1937 aa10.4□□□□□ -0.74
CD109-202ENST00000422508 STX10O60499 249 aa10.4□□□□□ -0.74
CD109-202ENST00000422508 NAA16Q6N069 864 aaPredicted RBP10.4□□□□□ -0.74
CD109-202ENST00000422508 HAUS1Q96CS2 278 aa10.4□□□□□ -0.74
CD109-202ENST00000422508 IFT140Q96RY7 1462 aa10.4□□□□□ -0.74
CD109-202ENST00000422508 RAPGEF6Q8TEU7 1601 aa10.4□□□□□ -0.74
CD109-202ENST00000422508 XPCQ01831 940 aaPredicted RBP10.4□□□□□ -0.74
CD109-202ENST00000422508 CUL4BQ13620 913 aa10.4□□□□□ -0.74
CD109-202ENST00000422508 DENND2CQ68D51 928 aa10.4□□□□□ -0.74
CD109-202ENST00000422508 CNNM4Q6P4Q7 775 aa10.4□□□□□ -0.74
CD109-202ENST00000422508 CABP5Q9NP86 173 aa10.4□□□□□ -0.74
CD109-202ENST00000422508 ATP6V1E1P36543 226 aa10.4□□□□□ -0.75
CD109-202ENST00000422508 MED4Q9NPJ6 270 aa10.4□□□□□ -0.75
CD109-202ENST00000422508 EIF4G3O43432 1585 aaKnown RBP10.39□□□□□ -0.75
CD109-202ENST00000422508 ZMYM3Q14202 1370 aa10.39□□□□□ -0.75
CD109-202ENST00000422508 DKC1O60832 514 aaKnown RBP eCLIP10.39□□□□□ -0.75
CD109-202ENST00000422508 TRMT1Q9NXH9 659 aaKnown RBP10.39□□□□□ -0.75
CD109-202ENST00000422508 EPB41P11171 864 aaKnown RBP10.39□□□□□ -0.75
CD109-202ENST00000422508 SMTNP53814 917 aa10.39□□□□□ -0.75
CD109-202ENST00000422508 SLFN5Q08AF3 891 aa10.39□□□□□ -0.75
CD109-202ENST00000422508 SLMAPQ14BN4 828 aa10.39□□□□□ -0.75
CD109-202ENST00000422508 PRPF40BQ6NWY9 871 aaKnown RBP10.39□□□□□ -0.75
CD109-202ENST00000422508 ARHGAP45Q92619 1136 aa10.39□□□□□ -0.75
CD109-202ENST00000422508 NOX5Q96PH1 765 aa10.39□□□□□ -0.75
CD109-202ENST00000422508 DBF4Q9UBU7 674 aaPredicted RBP10.39□□□□□ -0.75
CD109-202ENST00000422508 SAMM50Q9Y512 469 aa10.39□□□□□ -0.75
CD109-202ENST00000422508 TTC41PQ6P2S7 1318 aa10.39□□□□□ -0.75
CD109-202ENST00000422508 MIS12Q9H081 205 aa10.39□□□□□ -0.75
CD109-202ENST00000422508 ANKRD12Q6UB98 2062 aa10.39□□□□□ -0.75
CD109-202ENST00000422508 E7EVH7 732 aa10.39□□□□□ -0.75
CD109-202ENST00000422508 MYCBPQ99417 103 aaPredicted RBP10.39□□□□□ -0.75
CD109-202ENST00000422508 CCDC68Q9H2F9 335 aa10.39□□□□□ -0.75
CD109-202ENST00000422508 SCAF11Q99590 1463 aaKnown RBP10.39□□□□□ -0.75
CD109-202ENST00000422508 FAM13AO94988 1023 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms