RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 RALYLQ86SE5 291 aaKnown RBP17.16■□□□□ 0.34
HLA-DPA1-242ENST00000419277 ACSBG1Q96GR2 724 aa17.16■□□□□ 0.34
HLA-DPA1-242ENST00000419277 CCDC85AQ96PX6 553 aaPredicted RBP17.16■□□□□ 0.34
HLA-DPA1-242ENST00000419277 SYNE4Q8N205 404 aa17.15■□□□□ 0.34
HLA-DPA1-242ENST00000419277 ZNF213O14771 459 aa17.14■□□□□ 0.33
HLA-DPA1-242ENST00000419277 SCARF1Q14162 830 aa17.14■□□□□ 0.33
HLA-DPA1-242ENST00000419277 SF3B3Q15393 1217 aaKnown RBP17.14■□□□□ 0.33
HLA-DPA1-242ENST00000419277 SLC9C2Q5TAH2 1124 aa17.14■□□□□ 0.33
HLA-DPA1-242ENST00000419277 MTA3Q9BTC8 594 aa17.14■□□□□ 0.33
HLA-DPA1-242ENST00000419277 PANK2Q9BZ23 570 aa17.14■□□□□ 0.33
HLA-DPA1-242ENST00000419277 CFAP45Q9UL16 551 aa17.14■□□□□ 0.33
HLA-DPA1-242ENST00000419277 CNPY2Q9Y2B0 182 aa17.14■□□□□ 0.33
HLA-DPA1-242ENST00000419277 TAF1LQ8IZX4 1826 aa17.14■□□□□ 0.33
HLA-DPA1-242ENST00000419277 SALL1Q9NSC2 1324 aa17.13■□□□□ 0.33
HLA-DPA1-242ENST00000419277 FGAP02671 866 aa17.13■□□□□ 0.33
HLA-DPA1-242ENST00000419277 SPATA5Q8NB90 893 aa17.13■□□□□ 0.33
HLA-DPA1-242ENST00000419277 NGLY1Q96IV0 654 aa17.13■□□□□ 0.33
HLA-DPA1-242ENST00000419277 LARP6Q9BRS8 491 aaKnown RBP17.13■□□□□ 0.33
HLA-DPA1-242ENST00000419277 TSPY26PQ9H489 355 aa17.13■□□□□ 0.33
HLA-DPA1-242ENST00000419277 SYCE3A1L190 88 aa17.13■□□□□ 0.33
HLA-DPA1-242ENST00000419277 H3BQV1 296 aa17.13■□□□□ 0.33
HLA-DPA1-242ENST00000419277 IFFO2Q5TF58 517 aa17.13■□□□□ 0.33
HLA-DPA1-242ENST00000419277 CDC37L1Q7L3B6 337 aa17.13■□□□□ 0.33
HLA-DPA1-242ENST00000419277 TCEANC2Q96MN5 208 aa17.13■□□□□ 0.33
HLA-DPA1-242ENST00000419277 GNL3LQ9NVN8 582 aaKnown RBP17.13■□□□□ 0.33
HLA-DPA1-242ENST00000419277 MYO5AQ9Y4I1 1855 aaKnown RBP17.12■□□□□ 0.33
HLA-DPA1-242ENST00000419277 PDS5AQ29RF7 1337 aaKnown RBP17.12■□□□□ 0.33
HLA-DPA1-242ENST00000419277 PNPLA7Q6ZV29 1317 aa17.12■□□□□ 0.33
HLA-DPA1-242ENST00000419277 FIBPO43427 364 aa17.12■□□□□ 0.33
HLA-DPA1-242ENST00000419277 PDE6AP16499 860 aa17.12■□□□□ 0.33
HLA-DPA1-242ENST00000419277 DNM1Q05193 864 aaKnown RBP17.12■□□□□ 0.33
HLA-DPA1-242ENST00000419277 SCRN1Q12765 414 aa17.12■□□□□ 0.33
HLA-DPA1-242ENST00000419277 UBE4AQ14139 1066 aa17.12■□□□□ 0.33
HLA-DPA1-242ENST00000419277 FAM98CQ17RN3 349 aaKnown RBP17.12■□□□□ 0.33
HLA-DPA1-242ENST00000419277 UVSSAQ2YD98 709 aa17.12■□□□□ 0.33
HLA-DPA1-242ENST00000419277 SLC10A5Q5PT55 438 aa17.12■□□□□ 0.33
HLA-DPA1-242ENST00000419277 MB21D2Q8IYB1 491 aaPredicted RBP17.12■□□□□ 0.33
HLA-DPA1-242ENST00000419277 NSUN7Q8NE18 718 aaKnown RBP17.12■□□□□ 0.33
HLA-DPA1-242ENST00000419277 PUS7LQ9H0K6 701 aaKnown RBP17.12■□□□□ 0.33
HLA-DPA1-242ENST00000419277 A0A0G2JS52 829 aa17.11■□□□□ 0.33
HLA-DPA1-242ENST00000419277 SEMA3EO15041 775 aa17.11■□□□□ 0.33
HLA-DPA1-242ENST00000419277 PHKA1P46020 1223 aa17.11■□□□□ 0.33
HLA-DPA1-242ENST00000419277 PIP4K2BP78356 416 aa17.11■□□□□ 0.33
HLA-DPA1-242ENST00000419277 AIDAQ96BJ3 306 aa17.11■□□□□ 0.33
HLA-DPA1-242ENST00000419277 CNNM2Q9H8M5 875 aa17.11■□□□□ 0.33
HLA-DPA1-242ENST00000419277 SBF2Q86WG5 1849 aa17.11■□□□□ 0.33
HLA-DPA1-242ENST00000419277 ZNF804BA4D1E1 1349 aa17.11■□□□□ 0.33
HLA-DPA1-242ENST00000419277 UBAP1LF5GYI3 381 aa17.1■□□□□ 0.33
HLA-DPA1-242ENST00000419277 FOXP2O15409 715 aa17.1■□□□□ 0.33
HLA-DPA1-242ENST00000419277 IDH1O75874 414 aaKnown RBP17.1■□□□□ 0.33
HLA-DPA1-242ENST00000419277 CHGBP05060 677 aa17.1■□□□□ 0.33
HLA-DPA1-242ENST00000419277 HCLS1P14317 486 aaPredicted RBP17.1■□□□□ 0.33
HLA-DPA1-242ENST00000419277 TMEM87BQ96K49 555 aa17.1■□□□□ 0.33
HLA-DPA1-242ENST00000419277 BSDC1Q9NW68 430 aaPredicted RBP17.1■□□□□ 0.33
HLA-DPA1-242ENST00000419277 NARFQ9UHQ1 456 aa17.1■□□□□ 0.33
HLA-DPA1-242ENST00000419277 MAST2Q6P0Q8 1798 aa17.1■□□□□ 0.33
HLA-DPA1-242ENST00000419277 MYH13Q9UKX3 1938 aa17.1■□□□□ 0.33
HLA-DPA1-242ENST00000419277 TCRBV5S4A2TA0A5A2 114 aa17.1■□□□□ 0.33
HLA-DPA1-242ENST00000419277 STK3Q13188 491 aa17.1■□□□□ 0.33
HLA-DPA1-242ENST00000419277 ANKRD18AQ8IVF6 992 aa17.1■□□□□ 0.33
HLA-DPA1-242ENST00000419277 PDLIM2Q96JY6 352 aa17.1■□□□□ 0.33
HLA-DPA1-242ENST00000419277 NACAP1Q9BZK3 213 aa17.1■□□□□ 0.33
HLA-DPA1-242ENST00000419277 DDX19AQ9NUU7 478 aaKnown RBP17.1■□□□□ 0.33
HLA-DPA1-242ENST00000419277 RBM27Q9P2N5 1060 aaKnown RBP17.1■□□□□ 0.33
HLA-DPA1-242ENST00000419277 ZNF532Q9HCE3 1301 aa17.09■□□□□ 0.33
HLA-DPA1-242ENST00000419277 PTPDC1A2A3K4 754 aa17.09■□□□□ 0.33
HLA-DPA1-242ENST00000419277 RPS6KA4O75676 772 aa17.09■□□□□ 0.33
HLA-DPA1-242ENST00000419277 CDKL5O76039 1030 aa17.09■□□□□ 0.33
HLA-DPA1-242ENST00000419277 PDIA3P30101 505 aaKnown RBP17.09■□□□□ 0.33
HLA-DPA1-242ENST00000419277 LINC00116Q8NCU8 138 aa17.09■□□□□ 0.33
HLA-DPA1-242ENST00000419277 C8orf37Q96NL8 207 aa17.09■□□□□ 0.33
HLA-DPA1-242ENST00000419277 GDPD2Q9HCC8 539 aa17.09■□□□□ 0.33
HLA-DPA1-242ENST00000419277 NSFL1CQ9UNZ2 370 aaKnown RBP17.09■□□□□ 0.33
HLA-DPA1-242ENST00000419277 KIAA1551Q9HCM1 1747 aa17.08■□□□□ 0.33
HLA-DPA1-242ENST00000419277 GOLGA6L4A6NEF3 574 aa17.08■□□□□ 0.32
HLA-DPA1-242ENST00000419277 GADD45BO75293 160 aaPredicted RBP17.08■□□□□ 0.32
HLA-DPA1-242ENST00000419277 NT5C2P49902 561 aa17.08■□□□□ 0.32
HLA-DPA1-242ENST00000419277 RCAN1P53805 252 aa17.08■□□□□ 0.32
HLA-DPA1-242ENST00000419277 RASGRF1Q13972 1273 aa17.08■□□□□ 0.32
HLA-DPA1-242ENST00000419277 SPATA32Q96LK8 384 aa17.08■□□□□ 0.32
HLA-DPA1-242ENST00000419277 PIH1D3Q9NQM4 214 aaKnown RBP17.08■□□□□ 0.32
HLA-DPA1-242ENST00000419277 C4AP0C0L4 1744 aa17.08■□□□□ 0.32
HLA-DPA1-242ENST00000419277 C4BP0C0L5 1744 aa17.08■□□□□ 0.32
HLA-DPA1-242ENST00000419277 DUOX1Q9NRD9 1551 aa17.08■□□□□ 0.32
HLA-DPA1-242ENST00000419277 PATL2C9JE40 543 aaKnown RBP17.07■□□□□ 0.32
HLA-DPA1-242ENST00000419277 PRC1O43663 620 aa17.07■□□□□ 0.32
HLA-DPA1-242ENST00000419277 CHRNDQ07001 517 aa17.07■□□□□ 0.32
HLA-DPA1-242ENST00000419277 APOBRQ0VD83 1088 aa17.07■□□□□ 0.32
HLA-DPA1-242ENST00000419277 RESTQ13127 1097 aa17.07■□□□□ 0.32
HLA-DPA1-242ENST00000419277 CPLX2Q6PUV4 134 aaKnown RBP17.07■□□□□ 0.32
HLA-DPA1-242ENST00000419277 PI16Q6UXB8 463 aa17.07■□□□□ 0.32
HLA-DPA1-242ENST00000419277 ZNF396Q96N95 335 aaPredicted RBP17.07■□□□□ 0.32
HLA-DPA1-242ENST00000419277 STRBPQ96SI9 672 aaKnown RBP17.07■□□□□ 0.32
HLA-DPA1-242ENST00000419277 ANGEL1Q9UNK9 670 aaKnown RBP17.07■□□□□ 0.32
HLA-DPA1-242ENST00000419277 COL9A3Q14050 684 aaPredicted RBP17.07■□□□□ 0.32
HLA-DPA1-242ENST00000419277 RBSNQ9H1K0 784 aa17.07■□□□□ 0.32
HLA-DPA1-242ENST00000419277 NID2Q14112 1375 aa17.07■□□□□ 0.32
HLA-DPA1-242ENST00000419277 KCNQ2O43526 872 aa17.06■□□□□ 0.32
HLA-DPA1-242ENST00000419277 CAVIN2O95810 425 aa17.06■□□□□ 0.32
HLA-DPA1-242ENST00000419277 PCP11498 1178 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms