RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 OTUD7BQ6GQQ9 843 aa16.48■□□□□ 0.23
ATG3-202ENST00000402314 KRT222Q8N1A0 295 aa16.48■□□□□ 0.23
ATG3-202ENST00000402314 RESTQ13127 1097 aa16.48■□□□□ 0.23
ATG3-202ENST00000402314 TAF7LQ5H9L4 462 aa16.48■□□□□ 0.23
ATG3-202ENST00000402314 C11orf57Q6ZUT1 292 aaPredicted RBP16.48■□□□□ 0.23
ATG3-202ENST00000402314 DHX32Q7L7V1 743 aaKnown RBP16.48■□□□□ 0.23
ATG3-202ENST00000402314 PIGBQ92521 554 aa16.48■□□□□ 0.23
ATG3-202ENST00000402314 XAGE2Q96GT9 111 aa16.48■□□□□ 0.23
ATG3-202ENST00000402314 A0A0G2JS52 829 aa16.48■□□□□ 0.23
ATG3-202ENST00000402314 GOLGA6L19H0YKK7 550 aa16.48■□□□□ 0.23
ATG3-202ENST00000402314 NSUN7Q8NE18 718 aaKnown RBP16.48■□□□□ 0.23
ATG3-202ENST00000402314 ZFP91Q96JP5 570 aaPredicted RBP16.48■□□□□ 0.23
ATG3-202ENST00000402314 PTPDC1A2A3K4 754 aa16.47■□□□□ 0.23
ATG3-202ENST00000402314 RNF113AO15541 343 aaKnown RBP16.47■□□□□ 0.23
ATG3-202ENST00000402314 ZAP70P43403 619 aa16.47■□□□□ 0.23
ATG3-202ENST00000402314 ERCC6LQ2NKX8 1250 aa16.47■□□□□ 0.23
ATG3-202ENST00000402314 ALDH8A1Q9H2A2 487 aaPredicted RBP16.47■□□□□ 0.23
ATG3-202ENST00000402314 GJB4Q9NTQ9 266 aa16.47■□□□□ 0.23
ATG3-202ENST00000402314 DENND2AQ9ULE3 1009 aa16.47■□□□□ 0.23
ATG3-202ENST00000402314 SH3TC1Q8TE82 1336 aa16.47■□□□□ 0.23
ATG3-202ENST00000402314 POLR3GO15318 223 aaPredicted RBP16.47■□□□□ 0.23
ATG3-202ENST00000402314 TCIRG1Q13488 830 aa16.47■□□□□ 0.23
ATG3-202ENST00000402314 TTC39AQ5SRH9 613 aa16.47■□□□□ 0.23
ATG3-202ENST00000402314 COL5A2P05997 1499 aaPredicted RBP16.46■□□□□ 0.23
ATG3-202ENST00000402314 RBM6P78332 1123 aaKnown RBP16.46■□□□□ 0.23
ATG3-202ENST00000402314 CARD10Q9BWT7 1032 aa16.46■□□□□ 0.23
ATG3-202ENST00000402314 FOXP2O15409 715 aa16.46■□□□□ 0.23
ATG3-202ENST00000402314 ISCA1Q9BUE6 129 aa16.46■□□□□ 0.23
ATG3-202ENST00000402314 PTPN21Q16825 1174 aa16.45■□□□□ 0.22
ATG3-202ENST00000402314 PLA2G4DQ86XP0 818 aa16.45■□□□□ 0.22
ATG3-202ENST00000402314 LRRC8AQ8IWT6 810 aa16.45■□□□□ 0.22
ATG3-202ENST00000402314 SCAND2PQ9GZW5 306 aaPredicted RBP16.45■□□□□ 0.22
ATG3-202ENST00000402314 PUS7LQ9H0K6 701 aaKnown RBP16.45■□□□□ 0.22
ATG3-202ENST00000402314 HELLSQ9NRZ9 838 aa16.45■□□□□ 0.22
ATG3-202ENST00000402314 MORC2Q9Y6X9 1032 aaPredicted RBP16.45■□□□□ 0.22
ATG3-202ENST00000402314 DCCP43146 1447 aa16.45■□□□□ 0.22
ATG3-202ENST00000402314 CCDC69A6NI79 296 aa16.45■□□□□ 0.22
ATG3-202ENST00000402314 BECN2A8MW95 431 aa16.45■□□□□ 0.22
ATG3-202ENST00000402314 SNAP23O00161 211 aa16.45■□□□□ 0.22
ATG3-202ENST00000402314 NKX2-3Q8TAU0 364 aa16.45■□□□□ 0.22
ATG3-202ENST00000402314 PAXBP1Q9Y5B6 917 aa16.45■□□□□ 0.22
ATG3-202ENST00000402314 KCPQ6ZWJ8 1503 aa16.45■□□□□ 0.22
ATG3-202ENST00000402314 PFKFB2O60825 505 aa16.45■□□□□ 0.22
ATG3-202ENST00000402314 EXOSC10Q01780 885 aaKnown RBP16.45■□□□□ 0.22
ATG3-202ENST00000402314 PKD1L3Q7Z443 1732 aa16.45■□□□□ 0.22
ATG3-202ENST00000402314 PALLDQ8WX93 1383 aa16.44■□□□□ 0.22
ATG3-202ENST00000402314 GABPB1Q06547 395 aaPredicted RBP16.44■□□□□ 0.22
ATG3-202ENST00000402314 NKX1-1Q15270 411 aaPredicted RBP16.44■□□□□ 0.22
ATG3-202ENST00000402314 HELBQ8NG08 1087 aaPredicted RBP16.44■□□□□ 0.22
ATG3-202ENST00000402314 GREM2Q9H772 168 aa16.44■□□□□ 0.22
ATG3-202ENST00000402314 CERS3Q8IU89 383 aa16.44■□□□□ 0.22
ATG3-202ENST00000402314 DSCC1Q9BVC3 393 aa16.44■□□□□ 0.22
ATG3-202ENST00000402314 TMX1Q9H3N1 280 aa16.44■□□□□ 0.22
ATG3-202ENST00000402314 ELP1O95163 1332 aa16.43■□□□□ 0.22
ATG3-202ENST00000402314 PDIA3P30101 505 aaKnown RBP16.43■□□□□ 0.22
ATG3-202ENST00000402314 CCDC158Q5M9N0 1113 aa16.43■□□□□ 0.22
ATG3-202ENST00000402314 ZNF397Q8NF99 534 aaPredicted RBP16.43■□□□□ 0.22
ATG3-202ENST00000402314 SLC4A9Q96Q91 983 aa16.43■□□□□ 0.22
ATG3-202ENST00000402314 USP28Q96RU2 1077 aa16.43■□□□□ 0.22
ATG3-202ENST00000402314 ATG3Q9NT62 314 aa16.43■□□□□ 0.22
ATG3-202ENST00000402314 ZNF446Q9NWS9 450 aa16.43■□□□□ 0.22
ATG3-202ENST00000402314 BTG4Q9NY30 223 aa16.43■□□□□ 0.22
ATG3-202ENST00000402314 TBC1D2BQ9UPU7 963 aa16.43■□□□□ 0.22
ATG3-202ENST00000402314 SOS2Q07890 1332 aaPredicted RBP16.43■□□□□ 0.22
ATG3-202ENST00000402314 FGAP02671 866 aa16.43■□□□□ 0.22
ATG3-202ENST00000402314 IFIT5Q13325 482 aaKnown RBP16.43■□□□□ 0.22
ATG3-202ENST00000402314 SMARCC2Q8TAQ2 1214 aa16.43■□□□□ 0.22
ATG3-202ENST00000402314 EPC1Q9H2F5 836 aa16.43■□□□□ 0.22
ATG3-202ENST00000402314 GPR108Q9NPR9 543 aa16.43■□□□□ 0.22
ATG3-202ENST00000402314 ADD1P35611 737 aaKnown RBP16.43■□□□□ 0.22
ATG3-202ENST00000402314 METTL24Q5JXM2 366 aa16.42■□□□□ 0.22
ATG3-202ENST00000402314 KIF6Q6ZMV9 814 aa16.42■□□□□ 0.22
ATG3-202ENST00000402314 FAM177A1Q8N128 213 aaPredicted RBP16.42■□□□□ 0.22
ATG3-202ENST00000402314 CLSTN2Q9H4D0 955 aa16.42■□□□□ 0.22
ATG3-202ENST00000402314 ISM2Q6H9L7 571 aa16.42■□□□□ 0.22
ATG3-202ENST00000402314 SYT10Q6XYQ8 523 aa16.42■□□□□ 0.22
ATG3-202ENST00000402314 LDHAL6AQ6ZMR3 332 aa16.42■□□□□ 0.22
ATG3-202ENST00000402314 TIGD1Q96MW7 591 aa16.41■□□□□ 0.22
ATG3-202ENST00000402314 ZBTB1Q9Y2K1 713 aa16.41■□□□□ 0.22
ATG3-202ENST00000402314 CIAO1O76071 339 aa16.41■□□□□ 0.22
ATG3-202ENST00000402314 FDPSP14324 419 aaKnown RBP16.41■□□□□ 0.22
ATG3-202ENST00000402314 RXRAP19793 462 aa16.41■□□□□ 0.22
ATG3-202ENST00000402314 ITGA6P23229 1130 aa16.41■□□□□ 0.22
ATG3-202ENST00000402314 GOLPH3LQ9H4A5 285 aa16.41■□□□□ 0.22
ATG3-202ENST00000402314 MCAMP43121 646 aa16.4■□□□□ 0.22
ATG3-202ENST00000402314 ILDR1Q86SU0 546 aaPredicted RBP16.4■□□□□ 0.22
ATG3-202ENST00000402314 NEK11Q8NG66 645 aa16.4■□□□□ 0.22
ATG3-202ENST00000402314 RFX7Q2KHR2 1363 aa16.4■□□□□ 0.22
ATG3-202ENST00000402314 POLR3DP05423 398 aaPredicted RBP16.4■□□□□ 0.22
ATG3-202ENST00000402314 TDRD7Q8NHU6 1098 aaKnown RBP16.4■□□□□ 0.22
ATG3-202ENST00000402314 INCENPQ9NQS7 918 aa16.4■□□□□ 0.22
ATG3-202ENST00000402314 TJP1Q07157 1748 aa16.4■□□□□ 0.22
ATG3-202ENST00000402314 BIN1O00499 593 aa16.4■□□□□ 0.22
ATG3-202ENST00000402314 AOPEPQ8N6M6 819 aa16.4■□□□□ 0.22
ATG3-202ENST00000402314 NOL10Q9BSC4 688 aaKnown RBP16.4■□□□□ 0.22
ATG3-202ENST00000402314 ZCCHC17Q9NP64 241 aaKnown RBP16.4■□□□□ 0.22
ATG3-202ENST00000402314 CNNM1Q9NRU3 951 aa16.4■□□□□ 0.22
ATG3-202ENST00000402314 CCDC66A2RUB6 948 aa16.39■□□□□ 0.21
ATG3-202ENST00000402314 HMGB1P09429 215 aaKnown RBP16.39■□□□□ 0.21
ATG3-202ENST00000402314 TTLL11Q8NHH1 800 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms