RNA–Protein interactions for RNA: ENST00000399793.6

RETREG1-202, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best) BASIC

Gene RETREG1, Length 3,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-202ENST00000399793 TOGARAM2Q6ZUX3 1019 aa9.98□□□□□ -0.81
RETREG1-202ENST00000399793 VIPAS39Q9H9C1 493 aa9.98□□□□□ -0.81
RETREG1-202ENST00000399793 ZSWIM6Q9HCJ5 1215 aa9.98□□□□□ -0.81
RETREG1-202ENST00000399793 INO80Q9ULG1 1556 aaPredicted RBP9.97□□□□□ -0.81
RETREG1-202ENST00000399793 CDK12Q9NYV4 1490 aaPredicted RBP9.97□□□□□ -0.81
RETREG1-202ENST00000399793 NRXN1Q9ULB1 1477 aa9.97□□□□□ -0.81
RETREG1-202ENST00000399793 CDC42BPBQ9Y5S2 1711 aa9.97□□□□□ -0.81
RETREG1-202ENST00000399793 ZNF202O95125 648 aa9.97□□□□□ -0.81
RETREG1-202ENST00000399793 SNUPNO95149 360 aaKnown RBP9.97□□□□□ -0.81
RETREG1-202ENST00000399793 PEX19P40855 299 aa9.97□□□□□ -0.81
RETREG1-202ENST00000399793 PSMD2Q13200 908 aa9.97□□□□□ -0.81
RETREG1-202ENST00000399793 PTPN21Q16825 1174 aa9.97□□□□□ -0.81
RETREG1-202ENST00000399793 FAM76AQ8TAV0 307 aa9.97□□□□□ -0.81
RETREG1-202ENST00000399793 ZBTB10Q96DT7 871 aa9.97□□□□□ -0.81
RETREG1-202ENST00000399793 TEX13AQ9BXU3 409 aaPredicted RBP9.97□□□□□ -0.81
RETREG1-202ENST00000399793 CDC23Q9UJX2 597 aa9.97□□□□□ -0.81
RETREG1-202ENST00000399793 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.97□□□□□ -0.81
RETREG1-202ENST00000399793 GLI2P10070 1586 aa9.97□□□□□ -0.81
RETREG1-202ENST00000399793 MAST1Q9Y2H9 1570 aa9.97□□□□□ -0.81
RETREG1-202ENST00000399793 RPS6KA3P51812 740 aa9.97□□□□□ -0.81
RETREG1-202ENST00000399793 RBBP5Q15291 538 aaKnown RBP9.97□□□□□ -0.81
RETREG1-202ENST00000399793 TLDC1Q6P9B6 456 aa9.97□□□□□ -0.81
RETREG1-202ENST00000399793 ENGASEQ8NFI3 743 aa9.97□□□□□ -0.81
RETREG1-202ENST00000399793 DPF2Q92785 391 aa9.97□□□□□ -0.81
RETREG1-202ENST00000399793 SETD1AO15047 1707 aaKnown RBP9.96□□□□□ -0.81
RETREG1-202ENST00000399793 EIF3HO15372 352 aaKnown RBP eCLIP9.96□□□□□ -0.81
RETREG1-202ENST00000399793 MEFVO15553 781 aaPredicted RBP9.96□□□□□ -0.81
RETREG1-202ENST00000399793 ATP1A3P13637 1013 aa9.96□□□□□ -0.81
RETREG1-202ENST00000399793 RESTQ13127 1097 aa9.96□□□□□ -0.81
RETREG1-202ENST00000399793 NCAPHQ15003 741 aa9.96□□□□□ -0.81
RETREG1-202ENST00000399793 PAIP2Q9BPZ3 127 aaKnown RBP9.96□□□□□ -0.81
RETREG1-202ENST00000399793 BPIFA3Q9BQP9 254 aa9.96□□□□□ -0.81
RETREG1-202ENST00000399793 CAPS2Q9BXY5 557 aa9.96□□□□□ -0.81
RETREG1-202ENST00000399793 CFAP45Q9UL16 551 aa9.96□□□□□ -0.81
RETREG1-202ENST00000399793 HPCAL4Q9UM19 191 aa9.96□□□□□ -0.81
RETREG1-202ENST00000399793 GRIN2DO15399 1336 aa9.96□□□□□ -0.81
RETREG1-202ENST00000399793 ATXN2Q99700 1313 aaKnown RBP9.96□□□□□ -0.81
RETREG1-202ENST00000399793 ANKRD18BA2A2Z9 1011 aa9.96□□□□□ -0.82
RETREG1-202ENST00000399793 FCHSD2O94868 740 aa9.96□□□□□ -0.82
RETREG1-202ENST00000399793 TFRCP02786 760 aaKnown RBP9.96□□□□□ -0.82
RETREG1-202ENST00000399793 ARMC3Q5W041 872 aa9.96□□□□□ -0.82
RETREG1-202ENST00000399793 MYO3AQ8NEV4 1616 aa9.96□□□□□ -0.82
RETREG1-202ENST00000399793 RASSF9O75901 435 aa9.96□□□□□ -0.82
RETREG1-202ENST00000399793 PDE6BP35913 854 aa9.96□□□□□ -0.82
RETREG1-202ENST00000399793 SMTNP53814 917 aa9.96□□□□□ -0.82
RETREG1-202ENST00000399793 GNGT1P63211 74 aa9.96□□□□□ -0.82
RETREG1-202ENST00000399793 FAM160A1Q05DH4 1040 aa9.96□□□□□ -0.82
RETREG1-202ENST00000399793 PPFIA1Q13136 1202 aa9.96□□□□□ -0.82
RETREG1-202ENST00000399793 CCDC40Q4G0X9 1142 aa9.96□□□□□ -0.82
RETREG1-202ENST00000399793 PRPF40BQ6NWY9 871 aaKnown RBP9.96□□□□□ -0.82
RETREG1-202ENST00000399793 B4GALNT4Q76KP1 1039 aa9.96□□□□□ -0.82
RETREG1-202ENST00000399793 SPDL1Q96EA4 605 aa9.96□□□□□ -0.82
RETREG1-202ENST00000399793 PHACTR3Q96KR7 559 aa9.96□□□□□ -0.82
RETREG1-202ENST00000399793 DESI2Q9BSY9 194 aa9.96□□□□□ -0.82
RETREG1-202ENST00000399793 PLCH2O75038 1416 aa9.95□□□□□ -0.82
RETREG1-202ENST00000399793 LRRC7Q96NW7 1537 aa9.95□□□□□ -0.82
RETREG1-202ENST00000399793 ZC3H4Q9UPT8 1303 aaKnown RBP9.95□□□□□ -0.82
RETREG1-202ENST00000399793 PLEKHD1A6NEE1 506 aa9.95□□□□□ -0.82
RETREG1-202ENST00000399793 PDHBP11177 359 aa9.95□□□□□ -0.82
RETREG1-202ENST00000399793 EZRP15311 586 aaKnown RBP9.95□□□□□ -0.82
RETREG1-202ENST00000399793 GGCXP38435 758 aa9.95□□□□□ -0.82
RETREG1-202ENST00000399793 UBASH3AP57075 661 aa9.95□□□□□ -0.82
RETREG1-202ENST00000399793 TUBB4BP68371 445 aa9.95□□□□□ -0.82
RETREG1-202ENST00000399793 NFE2L2Q16236 605 aa9.95□□□□□ -0.82
RETREG1-202ENST00000399793 KIF4BQ2VIQ3 1234 aa9.95□□□□□ -0.82
RETREG1-202ENST00000399793 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.95□□□□□ -0.82
RETREG1-202ENST00000399793 SDF4Q9BRK5 362 aa9.95□□□□□ -0.82
RETREG1-202ENST00000399793 TM6SF1Q9BZW5 370 aa9.95□□□□□ -0.82
RETREG1-202ENST00000399793 FTOQ9C0B1 505 aaKnown RBP eCLIP9.95□□□□□ -0.82
RETREG1-202ENST00000399793 GGNBP2Q9H3C7 697 aa9.95□□□□□ -0.82
RETREG1-202ENST00000399793 ADGRF5Q8IZF2 1346 aa9.95□□□□□ -0.82
RETREG1-202ENST00000399793 RPSAP08865 295 aaKnown RBP9.95□□□□□ -0.82
RETREG1-202ENST00000399793 TOP1P11387 765 aaKnown RBP9.95□□□□□ -0.82
RETREG1-202ENST00000399793 PECAM1P16284 738 aaPredicted RBP9.95□□□□□ -0.82
RETREG1-202ENST00000399793 CCT2P78371 535 aaKnown RBP9.95□□□□□ -0.82
RETREG1-202ENST00000399793 TBC1D25Q3MII6 688 aa9.95□□□□□ -0.82
RETREG1-202ENST00000399793 CDCA2Q69YH5 1023 aaPredicted RBP9.95□□□□□ -0.82
RETREG1-202ENST00000399793 FSIP1Q8NA03 581 aa9.95□□□□□ -0.82
RETREG1-202ENST00000399793 FBXO3Q9UK99 471 aa9.95□□□□□ -0.82
RETREG1-202ENST00000399793 GOLGA6CA6NDK9 693 aa9.94□□□□□ -0.82
RETREG1-202ENST00000399793 COQ9O75208 318 aa9.94□□□□□ -0.82
RETREG1-202ENST00000399793 TUBBP07437 444 aa9.94□□□□□ -0.82
RETREG1-202ENST00000399793 GOLGA6DP0CG33 693 aa9.94□□□□□ -0.82
RETREG1-202ENST00000399793 ARHGAP25P42331 645 aa9.94□□□□□ -0.82
RETREG1-202ENST00000399793 PTH1RQ03431 593 aa9.94□□□□□ -0.82
RETREG1-202ENST00000399793 CFAP100Q494V2 611 aa9.94□□□□□ -0.82
RETREG1-202ENST00000399793 VSTM4Q8IW00 320 aa9.94□□□□□ -0.82
RETREG1-202ENST00000399793 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.94□□□□□ -0.82
RETREG1-202ENST00000399793 MRPL44Q9H9J2 332 aaKnown RBP9.94□□□□□ -0.82
RETREG1-202ENST00000399793 GOLGA6AQ9NYA3 693 aa9.94□□□□□ -0.82
RETREG1-202ENST00000399793 ENO4A6NNW6 628 aa9.94□□□□□ -0.82
RETREG1-202ENST00000399793 TMEM232C9JQI7 657 aa9.94□□□□□ -0.82
RETREG1-202ENST00000399793 BIN1O00499 593 aa9.94□□□□□ -0.82
RETREG1-202ENST00000399793 GBP2P32456 591 aaPredicted RBP9.94□□□□□ -0.82
RETREG1-202ENST00000399793 STIM1Q13586 685 aa9.94□□□□□ -0.82
RETREG1-202ENST00000399793 E2F5Q15329 346 aa9.94□□□□□ -0.82
RETREG1-202ENST00000399793 SNCBQ16143 134 aa9.94□□□□□ -0.82
RETREG1-202ENST00000399793 FAM228AQ86W67 206 aa9.94□□□□□ -0.82
RETREG1-202ENST00000399793 SAAL1Q96ER3 474 aa9.94□□□□□ -0.82
RETREG1-202ENST00000399793 SLC40A1Q9NP59 571 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms