RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 GJB4Q9NTQ9 266 aa14.23□□□□□ -0.13
RFC3-201ENST00000380071 CTNNA3Q9UI47 895 aa14.23□□□□□ -0.13
RFC3-201ENST00000380071 PRC1O43663 620 aa14.23□□□□□ -0.13
RFC3-201ENST00000380071 GPTP24298 496 aa14.23□□□□□ -0.13
RFC3-201ENST00000380071 FBXL16Q8N461 479 aa14.23□□□□□ -0.13
RFC3-201ENST00000380071 ZBTB38Q8NAP3 1195 aaPredicted RBP14.23□□□□□ -0.13
RFC3-201ENST00000380071 MAP7D2Q96T17 732 aa14.23□□□□□ -0.13
RFC3-201ENST00000380071 DENND2AQ9ULE3 1009 aa14.23□□□□□ -0.13
RFC3-201ENST00000380071 PCDHA7Q9UN72 937 aa14.23□□□□□ -0.13
RFC3-201ENST00000380071 SHANK3Q9BYB0 1731 aa14.22□□□□□ -0.13
RFC3-201ENST00000380071 SPEF2Q9C093 1822 aa14.22□□□□□ -0.13
RFC3-201ENST00000380071 POLR3DP05423 398 aaPredicted RBP14.22□□□□□ -0.13
RFC3-201ENST00000380071 ZFYP08048 801 aaPredicted RBP14.22□□□□□ -0.13
RFC3-201ENST00000380071 ANTXR2P58335 489 aa14.22□□□□□ -0.13
RFC3-201ENST00000380071 KIF6Q6ZMV9 814 aa14.22□□□□□ -0.13
RFC3-201ENST00000380071 MB21D2Q8IYB1 491 aaPredicted RBP14.22□□□□□ -0.13
RFC3-201ENST00000380071 FSIP1Q8NA03 581 aa14.22□□□□□ -0.13
RFC3-201ENST00000380071 NKX2-3Q8TAU0 364 aa14.22□□□□□ -0.13
RFC3-201ENST00000380071 APPBP2Q92624 585 aa14.22□□□□□ -0.13
RFC3-201ENST00000380071 PLA2G12BQ9BX93 195 aa14.22□□□□□ -0.13
RFC3-201ENST00000380071 FBXO3Q9UK99 471 aa14.22□□□□□ -0.13
RFC3-201ENST00000380071 HPS5Q9UPZ3 1129 aa14.22□□□□□ -0.13
RFC3-201ENST00000380071 RIPOR2Q9Y4F9 1068 aa14.22□□□□□ -0.13
RFC3-201ENST00000380071 KLF18A0A0U1RQI7 1052 aa14.22□□□□□ -0.13
RFC3-201ENST00000380071 GPAA1O43292 621 aa14.22□□□□□ -0.13
RFC3-201ENST00000380071 MCAMP43121 646 aa14.22□□□□□ -0.13
RFC3-201ENST00000380071 LRRFIP1Q32MZ4 808 aaKnown RBP14.22□□□□□ -0.13
RFC3-201ENST00000380071 CCDC144BQ3MJ40 725 aa14.22□□□□□ -0.13
RFC3-201ENST00000380071 ATL3Q6DD88 541 aa14.22□□□□□ -0.13
RFC3-201ENST00000380071 CCDC73Q6ZRK6 1079 aa14.22□□□□□ -0.13
RFC3-201ENST00000380071 CCDC144CPQ8IYA2 1237 aa14.22□□□□□ -0.13
RFC3-201ENST00000380071 GREM2Q9H772 168 aa14.22□□□□□ -0.13
RFC3-201ENST00000380071 CLIP2Q9UDT6 1046 aa14.22□□□□□ -0.13
RFC3-201ENST00000380071 SOS2Q07890 1332 aaPredicted RBP14.22□□□□□ -0.13
RFC3-201ENST00000380071 FAM160A1Q05DH4 1040 aa14.21□□□□□ -0.13
RFC3-201ENST00000380071 METTL24Q5JXM2 366 aa14.21□□□□□ -0.13
RFC3-201ENST00000380071 ZSCAN25Q6NSZ9 544 aa14.21□□□□□ -0.13
RFC3-201ENST00000380071 LDHAL6AQ6ZMR3 332 aa14.21□□□□□ -0.13
RFC3-201ENST00000380071 CLIC4Q9Y696 253 aa14.21□□□□□ -0.13
RFC3-201ENST00000380071 A0A1B0GVL5 298 aa14.21□□□□□ -0.14
RFC3-201ENST00000380071 ZNF213O14771 459 aa14.21□□□□□ -0.14
RFC3-201ENST00000380071 CTAGE5O15320 804 aa14.21□□□□□ -0.14
RFC3-201ENST00000380071 KINO60870 393 aaKnown RBP14.21□□□□□ -0.14
RFC3-201ENST00000380071 ITGA6P23229 1130 aa14.21□□□□□ -0.14
RFC3-201ENST00000380071 GTF2F1P35269 517 aaKnown RBP eCLIP14.21□□□□□ -0.14
RFC3-201ENST00000380071 ATP2B3Q16720 1220 aa14.21□□□□□ -0.14
RFC3-201ENST00000380071 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.21□□□□□ -0.14
RFC3-201ENST00000380071 TTLL11Q8NHH1 800 aa14.21□□□□□ -0.14
RFC3-201ENST00000380071 FBXW7Q969H0 707 aa14.21□□□□□ -0.14
RFC3-201ENST00000380071 SLAIN2Q9P270 581 aa14.21□□□□□ -0.14
RFC3-201ENST00000380071 XIRP1Q702N8 1843 aaKnown RBP14.2□□□□□ -0.14
RFC3-201ENST00000380071 GOLGA6L19H0YKK7 550 aa14.2□□□□□ -0.14
RFC3-201ENST00000380071 STX1AQ16623 288 aa14.2□□□□□ -0.14
RFC3-201ENST00000380071 ZNF710Q8N1W2 664 aa14.2□□□□□ -0.14
RFC3-201ENST00000380071 NCOA7Q8NI08 942 aa14.2□□□□□ -0.14
RFC3-201ENST00000380071 CACTINQ8WUQ7 758 aaKnown RBP14.2□□□□□ -0.14
RFC3-201ENST00000380071 C8orf76Q96K31 380 aa14.2□□□□□ -0.14
RFC3-201ENST00000380071 RTEL1Q9NZ71 1219 aa14.2□□□□□ -0.14
RFC3-201ENST00000380071 MAP3K15Q6ZN16 1313 aa14.2□□□□□ -0.14
RFC3-201ENST00000380071 TOGARAM1Q9Y4F4 1720 aa14.2□□□□□ -0.14
RFC3-201ENST00000380071 GOLGA8BA8MQT2 603 aa14.2□□□□□ -0.14
RFC3-201ENST00000380071 CAVIN2O95810 425 aa14.2□□□□□ -0.14
RFC3-201ENST00000380071 GIGYF2Q6Y7W6 1299 aaKnown RBP14.2□□□□□ -0.14
RFC3-201ENST00000380071 NLRP10Q86W26 655 aa14.2□□□□□ -0.14
RFC3-201ENST00000380071 DHX40Q8IX18 779 aaKnown RBP14.2□□□□□ -0.14
RFC3-201ENST00000380071 FMR1NBQ8N0W7 255 aaPredicted RBP14.2□□□□□ -0.14
RFC3-201ENST00000380071 LINC00301Q8NCQ3 95 aa14.2□□□□□ -0.14
RFC3-201ENST00000380071 NBPF3Q9H094 633 aa14.2□□□□□ -0.14
RFC3-201ENST00000380071 ORC3Q9UBD5 711 aaPredicted RBP14.2□□□□□ -0.14
RFC3-201ENST00000380071 RIC1Q4ADV7 1423 aa14.19□□□□□ -0.14
RFC3-201ENST00000380071 RIOK3O14730 519 aaKnown RBP14.19□□□□□ -0.14
RFC3-201ENST00000380071 STARD3NLO95772 234 aa14.19□□□□□ -0.14
RFC3-201ENST00000380071 NDUFA8P51970 172 aa14.19□□□□□ -0.14
RFC3-201ENST00000380071 ARID5BQ14865 1188 aa14.19□□□□□ -0.14
RFC3-201ENST00000380071 SLC9C2Q5TAH2 1124 aa14.19□□□□□ -0.14
RFC3-201ENST00000380071 ADALQ6DHV7 355 aa14.19□□□□□ -0.14
RFC3-201ENST00000380071 RALYLQ86SE5 291 aaKnown RBP14.19□□□□□ -0.14
RFC3-201ENST00000380071 FBXO18Q8NFZ0 1043 aa14.19□□□□□ -0.14
RFC3-201ENST00000380071 CNNM1Q9NRU3 951 aa14.19□□□□□ -0.14
RFC3-201ENST00000380071 KIF28PB7ZC32 967 aa14.18□□□□□ -0.14
RFC3-201ENST00000380071 ADD2P35612 726 aa14.18□□□□□ -0.14
RFC3-201ENST00000380071 MRPS27Q92552 414 aaKnown RBP14.18□□□□□ -0.14
RFC3-201ENST00000380071 CHMP4CQ96CF2 233 aa14.18□□□□□ -0.14
RFC3-201ENST00000380071 PKNOX2Q96KN3 472 aa14.18□□□□□ -0.14
RFC3-201ENST00000380071 SLC4A9Q96Q91 983 aa14.18□□□□□ -0.14
RFC3-201ENST00000380071 TEX13AQ9BXU3 409 aaPredicted RBP14.18□□□□□ -0.14
RFC3-201ENST00000380071 PIH1D3Q9NQM4 214 aaKnown RBP14.18□□□□□ -0.14
RFC3-201ENST00000380071 CPLX1O14810 134 aa14.17□□□□□ -0.14
RFC3-201ENST00000380071 STK38Q15208 465 aa14.17□□□□□ -0.14
RFC3-201ENST00000380071 SARM1Q6SZW1 724 aa14.17□□□□□ -0.14
RFC3-201ENST00000380071 TAOK2Q9UL54 1235 aa14.17□□□□□ -0.14
RFC3-201ENST00000380071 BECN2A8MW95 431 aa14.17□□□□□ -0.14
RFC3-201ENST00000380071 DHX16O60231 1041 aaKnown RBP14.17□□□□□ -0.14
RFC3-201ENST00000380071 CTSWP56202 376 aa14.17□□□□□ -0.14
RFC3-201ENST00000380071 SF3A1Q15459 793 aaKnown RBP14.17□□□□□ -0.14
RFC3-201ENST00000380071 CYB5R4Q7L1T6 521 aa14.17□□□□□ -0.14
RFC3-201ENST00000380071 MTERF4Q7Z6M4 381 aaKnown RBP14.17□□□□□ -0.14
RFC3-201ENST00000380071 TBC1D10CQ8IV04 446 aa14.17□□□□□ -0.14
RFC3-201ENST00000380071 VGLL2Q8N8G2 317 aa14.17□□□□□ -0.14
RFC3-201ENST00000380071 AIFM3Q96NN9 605 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms