RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 TBC1D2BQ9UPU7 963 aa21.21■□□□□ 0.99
UBQLN4-201ENST00000368309 KLF18A0A0U1RQI7 1052 aa21.21■□□□□ 0.99
UBQLN4-201ENST00000368309 DRC7Q8IY82 874 aa21.21■□□□□ 0.99
UBQLN4-201ENST00000368309 VSIG10Q8N0Z9 540 aa21.21■□□□□ 0.99
UBQLN4-201ENST00000368309 CARMIL3Q8ND23 1372 aa21.21■□□□□ 0.99
UBQLN4-201ENST00000368309 LAMA4Q16363 1823 aa21.2■□□□□ 0.98
UBQLN4-201ENST00000368309 IRS4O14654 1257 aaPredicted RBP21.2■□□□□ 0.98
UBQLN4-201ENST00000368309 ZNF213O14771 459 aa21.2■□□□□ 0.98
UBQLN4-201ENST00000368309 PTGS1P23219 599 aa21.2■□□□□ 0.98
UBQLN4-201ENST00000368309 ERCC4Q92889 916 aaPredicted RBP21.2■□□□□ 0.98
UBQLN4-201ENST00000368309 ZBTB1Q9Y2K1 713 aa21.2■□□□□ 0.98
UBQLN4-201ENST00000368309 POLR3DP05423 398 aaPredicted RBP21.2■□□□□ 0.98
UBQLN4-201ENST00000368309 SLC9C2Q5TAH2 1124 aa21.2■□□□□ 0.98
UBQLN4-201ENST00000368309 ANKRD18BA2A2Z9 1011 aa21.2■□□□□ 0.98
UBQLN4-201ENST00000368309 HELBQ8NG08 1087 aaPredicted RBP21.2■□□□□ 0.98
UBQLN4-201ENST00000368309 ZNF396Q96N95 335 aaPredicted RBP21.2■□□□□ 0.98
UBQLN4-201ENST00000368309 NRBP1Q9UHY1 535 aa21.2■□□□□ 0.98
UBQLN4-201ENST00000368309 GOLGA8BA8MQT2 603 aa21.19■□□□□ 0.98
UBQLN4-201ENST00000368309 IDH1O75874 414 aaKnown RBP21.19■□□□□ 0.98
UBQLN4-201ENST00000368309 ANTXR2P58335 489 aa21.19■□□□□ 0.98
UBQLN4-201ENST00000368309 XIRP1Q702N8 1843 aaKnown RBP21.19■□□□□ 0.98
UBQLN4-201ENST00000368309 GOLGA6L6A8MZA4 724 aa21.19■□□□□ 0.98
UBQLN4-201ENST00000368309 CTSWP56202 376 aa21.19■□□□□ 0.98
UBQLN4-201ENST00000368309 RALYLQ86SE5 291 aaKnown RBP21.19■□□□□ 0.98
UBQLN4-201ENST00000368309 MB21D2Q8IYB1 491 aaPredicted RBP21.19■□□□□ 0.98
UBQLN4-201ENST00000368309 APPP05067 770 aa21.18■□□□□ 0.98
UBQLN4-201ENST00000368309 CYP19A1P11511 503 aaPredicted RBP21.18■□□□□ 0.98
UBQLN4-201ENST00000368309 SNW1Q13573 536 aaKnown RBP21.18■□□□□ 0.98
UBQLN4-201ENST00000368309 CCDC186Q7Z3E2 898 aa21.18■□□□□ 0.98
UBQLN4-201ENST00000368309 NCOA7Q8NI08 942 aa21.18■□□□□ 0.98
UBQLN4-201ENST00000368309 NKX2-3Q8TAU0 364 aa21.18■□□□□ 0.98
UBQLN4-201ENST00000368309 KIAA1524Q8TCG1 905 aa21.18■□□□□ 0.98
UBQLN4-201ENST00000368309 CCDC73Q6ZRK6 1079 aa21.18■□□□□ 0.98
UBQLN4-201ENST00000368309 FBXW7Q969H0 707 aa21.18■□□□□ 0.98
UBQLN4-201ENST00000368309 HPS5Q9UPZ3 1129 aa21.18■□□□□ 0.98
UBQLN4-201ENST00000368309 A0A0G2JS52 829 aa21.17■□□□□ 0.98
UBQLN4-201ENST00000368309 FAM177BA6PVY3 158 aa21.17■□□□□ 0.98
UBQLN4-201ENST00000368309 EVCP57679 992 aa21.17■□□□□ 0.98
UBQLN4-201ENST00000368309 FSIP1Q8NA03 581 aa21.17■□□□□ 0.98
UBQLN4-201ENST00000368309 PIH1D3Q9NQM4 214 aaKnown RBP21.17■□□□□ 0.98
UBQLN4-201ENST00000368309 ORC3Q9UBD5 711 aaPredicted RBP21.17■□□□□ 0.98
UBQLN4-201ENST00000368309 CPLX1O14810 134 aa21.17■□□□□ 0.98
UBQLN4-201ENST00000368309 C11orf57Q6ZUT1 292 aaPredicted RBP21.17■□□□□ 0.98
UBQLN4-201ENST00000368309 C8orf76Q96K31 380 aa21.17■□□□□ 0.98
UBQLN4-201ENST00000368309 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.17■□□□□ 0.98
UBQLN4-201ENST00000368309 PHKA1P46020 1223 aa21.16■□□□□ 0.98
UBQLN4-201ENST00000368309 TDRD7Q8NHU6 1098 aaKnown RBP21.16■□□□□ 0.98
UBQLN4-201ENST00000368309 SPTLC3Q9NUV7 552 aa21.16■□□□□ 0.98
UBQLN4-201ENST00000368309 RIC1Q4ADV7 1423 aa21.16■□□□□ 0.98
UBQLN4-201ENST00000368309 PAPPAQ13219 1627 aa21.16■□□□□ 0.98
UBQLN4-201ENST00000368309 SNAP23O00161 211 aa21.16■□□□□ 0.98
UBQLN4-201ENST00000368309 PCDHA7Q9UN72 937 aa21.16■□□□□ 0.98
UBQLN4-201ENST00000368309 KINO60870 393 aaKnown RBP21.16■□□□□ 0.98
UBQLN4-201ENST00000368309 LRMPQ12912 555 aa21.16■□□□□ 0.98
UBQLN4-201ENST00000368309 FBXL16Q8N461 479 aa21.16■□□□□ 0.98
UBQLN4-201ENST00000368309 ADD2P35612 726 aa21.15■□□□□ 0.98
UBQLN4-201ENST00000368309 ZNF75DP51815 510 aa21.15■□□□□ 0.98
UBQLN4-201ENST00000368309 TSC1Q92574 1164 aa21.15■□□□□ 0.98
UBQLN4-201ENST00000368309 CDHR2Q9BYE9 1310 aa21.15■□□□□ 0.98
UBQLN4-201ENST00000368309 SHANK3Q9BYB0 1731 aa21.15■□□□□ 0.98
UBQLN4-201ENST00000368309 PDE8BO95263 885 aa21.15■□□□□ 0.98
UBQLN4-201ENST00000368309 RXRAP19793 462 aa21.15■□□□□ 0.98
UBQLN4-201ENST00000368309 CLIC4Q9Y696 253 aa21.15■□□□□ 0.98
UBQLN4-201ENST00000368309 A0A1B0GVL5 298 aa21.15■□□□□ 0.98
UBQLN4-201ENST00000368309 NBPF3Q9H094 633 aa21.15■□□□□ 0.98
UBQLN4-201ENST00000368309 TOGARAM1Q9Y4F4 1720 aa21.14■□□□□ 0.98
UBQLN4-201ENST00000368309 TPM3P06753 285 aa21.14■□□□□ 0.98
UBQLN4-201ENST00000368309 CCDC102BQ68D86 513 aa21.14■□□□□ 0.98
UBQLN4-201ENST00000368309 VGLL2Q8N8G2 317 aa21.14■□□□□ 0.98
UBQLN4-201ENST00000368309 ENGASEQ8NFI3 743 aa21.14■□□□□ 0.98
UBQLN4-201ENST00000368309 FAM160A1Q05DH4 1040 aa21.14■□□□□ 0.97
UBQLN4-201ENST00000368309 DHX16O60231 1041 aaKnown RBP21.13■□□□□ 0.97
UBQLN4-201ENST00000368309 SF3A1Q15459 793 aaKnown RBP21.13■□□□□ 0.97
UBQLN4-201ENST00000368309 DZIP3Q86Y13 1208 aaKnown RBP21.13■□□□□ 0.97
UBQLN4-201ENST00000368309 INCENPQ9NQS7 918 aa21.13■□□□□ 0.97
UBQLN4-201ENST00000368309 ZNF532Q9HCE3 1301 aa21.13■□□□□ 0.97
UBQLN4-201ENST00000368309 TRDNQ13061 729 aa21.13■□□□□ 0.97
UBQLN4-201ENST00000368309 ATL3Q6DD88 541 aa21.13■□□□□ 0.97
UBQLN4-201ENST00000368309 PLA2G4DQ86XP0 818 aa21.13■□□□□ 0.97
UBQLN4-201ENST00000368309 FBXO18Q8NFZ0 1043 aa21.13■□□□□ 0.97
UBQLN4-201ENST00000368309 CHMP4CQ96CF2 233 aa21.13■□□□□ 0.97
UBQLN4-201ENST00000368309 GOLGA6L19H0YKK7 550 aa21.13■□□□□ 0.97
UBQLN4-201ENST00000368309 IQCB1Q15051 598 aa21.13■□□□□ 0.97
UBQLN4-201ENST00000368309 TBC1D10CQ8IV04 446 aa21.13■□□□□ 0.97
UBQLN4-201ENST00000368309 WWC3Q9ULE0 1092 aa21.13■□□□□ 0.97
UBQLN4-201ENST00000368309 DYNC1I1O14576 645 aa21.12■□□□□ 0.97
UBQLN4-201ENST00000368309 PDE8AO60658 829 aa21.12■□□□□ 0.97
UBQLN4-201ENST00000368309 STK38Q15208 465 aa21.12■□□□□ 0.97
UBQLN4-201ENST00000368309 AIFM3Q96NN9 605 aa21.12■□□□□ 0.97
UBQLN4-201ENST00000368309 PDCL3Q9H2J4 239 aa21.12■□□□□ 0.97
UBQLN4-201ENST00000368309 UBN2Q6ZU65 1347 aa21.12■□□□□ 0.97
UBQLN4-201ENST00000368309 ZSCAN25Q6NSZ9 544 aa21.12■□□□□ 0.97
UBQLN4-201ENST00000368309 CYB5R4Q7L1T6 521 aa21.12■□□□□ 0.97
UBQLN4-201ENST00000368309 SDF4Q9BRK5 362 aa21.12■□□□□ 0.97
UBQLN4-201ENST00000368309 RTEL1Q9NZ71 1219 aa21.12■□□□□ 0.97
UBQLN4-201ENST00000368309 CTAGE5O15320 804 aa21.11■□□□□ 0.97
UBQLN4-201ENST00000368309 CCDC144CPQ8IYA2 1237 aa21.11■□□□□ 0.97
UBQLN4-201ENST00000368309 LINC00301Q8NCQ3 95 aa21.11■□□□□ 0.97
UBQLN4-201ENST00000368309 SENP2Q9HC62 589 aa21.11■□□□□ 0.97
UBQLN4-201ENST00000368309 CLIP2Q9UDT6 1046 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms