RNA–Protein interactions for RNA: ENST00000362061.3

CACNA1S-201, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CACNA1S, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-201ENST00000362061 PTPDC1A2A3K4 754 aa12.02□□□□□ -0.49
CACNA1S-201ENST00000362061 AKR1B10O60218 316 aa12.02□□□□□ -0.49
CACNA1S-201ENST00000362061 ZBED4O75132 1171 aa12.02□□□□□ -0.49
CACNA1S-201ENST00000362061 USP48Q86UV5 1035 aa12.02□□□□□ -0.49
CACNA1S-201ENST00000362061 TNPO1Q92973 898 aaKnown RBP12.02□□□□□ -0.49
CACNA1S-201ENST00000362061 ZKSCAN3Q9BRR0 538 aa12.02□□□□□ -0.49
CACNA1S-201ENST00000362061 METTL22Q9BUU2 404 aaPredicted RBP12.02□□□□□ -0.49
CACNA1S-201ENST00000362061 A0A1W2PP64 1363 aa12.02□□□□□ -0.49
CACNA1S-201ENST00000362061 TAF5LO75529 589 aa12.02□□□□□ -0.49
CACNA1S-201ENST00000362061 PTPN14Q15678 1187 aa12.01□□□□□ -0.49
CACNA1S-201ENST00000362061 GBP3Q9H0R5 595 aa12.01□□□□□ -0.49
CACNA1S-201ENST00000362061 A0A1B0GUL7 405 aa12.01□□□□□ -0.49
CACNA1S-201ENST00000362061 CPXCR1Q8N123 301 aa12.01□□□□□ -0.49
CACNA1S-201ENST00000362061 PLCD4Q9BRC7 762 aa12.01□□□□□ -0.49
CACNA1S-201ENST00000362061 PSMA7O14818 248 aa12.01□□□□□ -0.49
CACNA1S-201ENST00000362061 URI1O94763 535 aaPredicted RBP12.01□□□□□ -0.49
CACNA1S-201ENST00000362061 HARSP12081 509 aaKnown RBP12.01□□□□□ -0.49
CACNA1S-201ENST00000362061 MYCLP12524 364 aaPredicted RBP12.01□□□□□ -0.49
CACNA1S-201ENST00000362061 TIMM10P62072 90 aa12.01□□□□□ -0.49
CACNA1S-201ENST00000362061 NUCB1Q02818 461 aa12.01□□□□□ -0.49
CACNA1S-201ENST00000362061 MTERF4Q7Z6M4 381 aaKnown RBP12.01□□□□□ -0.49
CACNA1S-201ENST00000362061 TSPYL6Q8N831 410 aa12.01□□□□□ -0.49
CACNA1S-201ENST00000362061 KCNG4Q8TDN1 519 aa12.01□□□□□ -0.49
CACNA1S-201ENST00000362061 KIF2AO00139 706 aaPredicted RBP12.01□□□□□ -0.49
CACNA1S-201ENST00000362061 STAMBPO95630 424 aa12.01□□□□□ -0.49
CACNA1S-201ENST00000362061 MCM7P33993 719 aa12.01□□□□□ -0.49
CACNA1S-201ENST00000362061 TMC6Q7Z403 805 aa12.01□□□□□ -0.49
CACNA1S-201ENST00000362061 C2CD5Q86YS7 1000 aa12.01□□□□□ -0.49
CACNA1S-201ENST00000362061 PLVAPQ9BX97 442 aa12.01□□□□□ -0.49
CACNA1S-201ENST00000362061 SBNO1A3KN83 1393 aa12.01□□□□□ -0.49
CACNA1S-201ENST00000362061 NUP160Q12769 1436 aa12.01□□□□□ -0.49
CACNA1S-201ENST00000362061 MARCKSP29966 332 aaPredicted RBP12.01□□□□□ -0.49
CACNA1S-201ENST00000362061 MAP2K1Q02750 393 aaPredicted RBP12.01□□□□□ -0.49
CACNA1S-201ENST00000362061 ESYT1Q9BSJ8 1104 aa12.01□□□□□ -0.49
CACNA1S-201ENST00000362061 GCOM1H8Y6P7 765 aaPredicted RBP12□□□□□ -0.49
CACNA1S-201ENST00000362061 LPXNO60711 386 aa12□□□□□ -0.49
CACNA1S-201ENST00000362061 MYZAPP0CAP1 466 aa12□□□□□ -0.49
CACNA1S-201ENST00000362061 HLTFQ14527 1009 aaKnown RBP eCLIP12□□□□□ -0.49
CACNA1S-201ENST00000362061 NAP1L4Q99733 375 aaKnown RBP12□□□□□ -0.49
CACNA1S-201ENST00000362061 TMX1Q9H3N1 280 aa12□□□□□ -0.49
CACNA1S-201ENST00000362061 IFI16Q16666 785 aaKnown RBP12□□□□□ -0.49
CACNA1S-201ENST00000362061 SPECC1Q5M775 1068 aa12□□□□□ -0.49
CACNA1S-201ENST00000362061 OTUD6BQ8N6M0 293 aa12□□□□□ -0.49
CACNA1S-201ENST00000362061 NAA15Q9BXJ9 866 aaKnown RBP12□□□□□ -0.49
CACNA1S-201ENST00000362061 RBM28Q9NW13 759 aaKnown RBP12□□□□□ -0.49
CACNA1S-201ENST00000362061 ZFYVE9O95405 1425 aa12□□□□□ -0.49
CACNA1S-201ENST00000362061 TNFAIP1Q13829 316 aa12□□□□□ -0.49
CACNA1S-201ENST00000362061 NSMFQ6X4W1 530 aa12□□□□□ -0.49
CACNA1S-201ENST00000362061 CERS3Q8IU89 383 aa12□□□□□ -0.49
CACNA1S-201ENST00000362061 ZNF710Q8N1W2 664 aa12□□□□□ -0.49
CACNA1S-201ENST00000362061 AATFQ9NY61 560 aaKnown RBP eCLIP12□□□□□ -0.49
CACNA1S-201ENST00000362061 WDR62O43379 1518 aa12□□□□□ -0.49
CACNA1S-201ENST00000362061 UNC13AQ9UPW8 1703 aa12□□□□□ -0.49
CACNA1S-201ENST00000362061 RXRAP19793 462 aa12□□□□□ -0.49
CACNA1S-201ENST00000362061 DHX58Q96C10 678 aa12□□□□□ -0.49
CACNA1S-201ENST00000362061 SPC25Q9HBM1 224 aa12□□□□□ -0.49
CACNA1S-201ENST00000362061 LGR6Q9HBX8 967 aa12□□□□□ -0.49
CACNA1S-201ENST00000362061 CHMP2AO43633 222 aa11.99□□□□□ -0.49
CACNA1S-201ENST00000362061 UBE4AQ14139 1066 aa11.99□□□□□ -0.49
CACNA1S-201ENST00000362061 GIGYF2Q6Y7W6 1299 aaKnown RBP11.99□□□□□ -0.49
CACNA1S-201ENST00000362061 ARMT1Q9H993 441 aa11.99□□□□□ -0.49
CACNA1S-201ENST00000362061 ARL1P40616 181 aaPredicted RBP11.99□□□□□ -0.49
CACNA1S-201ENST00000362061 HDAC1Q13547 482 aaPredicted RBP11.99□□□□□ -0.49
CACNA1S-201ENST00000362061 ZNF594Q96JF6 807 aaPredicted RBP11.99□□□□□ -0.49
CACNA1S-201ENST00000362061 SOS1Q07889 1333 aaPredicted RBP11.99□□□□□ -0.49
CACNA1S-201ENST00000362061 FSD2A1L4K1 749 aa11.99□□□□□ -0.49
CACNA1S-201ENST00000362061 GJC1P36383 396 aa11.99□□□□□ -0.49
CACNA1S-201ENST00000362061 MSANTD4Q8NCY6 345 aa11.99□□□□□ -0.49
CACNA1S-201ENST00000362061 DCPSQ96C86 337 aaKnown RBP11.99□□□□□ -0.49
CACNA1S-201ENST00000362061 CEP83Q9Y592 693 aa11.99□□□□□ -0.49
CACNA1S-201ENST00000362061 ITSN2Q9NZM3 1697 aa11.99□□□□□ -0.49
CACNA1S-201ENST00000362061 CCDC171Q6TFL3 1326 aa11.99□□□□□ -0.49
CACNA1S-201ENST00000362061 VAMP4O75379 141 aa11.99□□□□□ -0.49
CACNA1S-201ENST00000362061 MAP9Q49MG5 647 aa11.99□□□□□ -0.49
CACNA1S-201ENST00000362061 IKBKGQ9Y6K9 419 aa11.99□□□□□ -0.49
CACNA1S-201ENST00000362061 SLC1A4P43007 532 aa11.99□□□□□ -0.49
CACNA1S-201ENST00000362061 SPOUT1Q5T280 376 aaKnown RBP11.99□□□□□ -0.49
CACNA1S-201ENST00000362061 DTHD1Q6ZMT9 781 aa11.99□□□□□ -0.49
CACNA1S-201ENST00000362061 TBC1D22AQ8WUA7 517 aa11.99□□□□□ -0.49
CACNA1S-201ENST00000362061 TRIM6Q9C030 488 aaPredicted RBP11.99□□□□□ -0.49
CACNA1S-201ENST00000362061 SLC5A4Q9NY91 659 aa11.99□□□□□ -0.49
CACNA1S-201ENST00000362061 BCCIPQ9P287 314 aaKnown RBP eCLIP11.99□□□□□ -0.49
CACNA1S-201ENST00000362061 APOBRQ0VD83 1088 aa11.98□□□□□ -0.49
CACNA1S-201ENST00000362061 DHX37Q8IY37 1157 aaKnown RBP11.98□□□□□ -0.49
CACNA1S-201ENST00000362061 XAGE2Q96GT9 111 aa11.98□□□□□ -0.49
CACNA1S-201ENST00000362061 M0QZ92 97 aa11.98□□□□□ -0.49
CACNA1S-201ENST00000362061 SULF1Q8IWU6 871 aa11.98□□□□□ -0.49
CACNA1S-201ENST00000362061 AZI2Q9H6S1 392 aa11.98□□□□□ -0.49
CACNA1S-201ENST00000362061 IGHDP01880 384 aa11.98□□□□□ -0.49
CACNA1S-201ENST00000362061 EEF2P13639 858 aaKnown RBP11.98□□□□□ -0.49
CACNA1S-201ENST00000362061 GTF2IP78347 998 aa11.98□□□□□ -0.49
CACNA1S-201ENST00000362061 LETM2Q2VYF4 491 aa11.98□□□□□ -0.49
CACNA1S-201ENST00000362061 TMX3Q96JJ7 454 aa11.98□□□□□ -0.49
CACNA1S-201ENST00000362061 PRAG1Q86YV5 1406 aa11.98□□□□□ -0.49
CACNA1S-201ENST00000362061 ZNF165P49910 485 aa11.98□□□□□ -0.49
CACNA1S-201ENST00000362061 KIAA0753Q2KHM9 967 aa11.98□□□□□ -0.49
CACNA1S-201ENST00000362061 FNBP4Q8N3X1 1017 aaPredicted RBP11.98□□□□□ -0.49
CACNA1S-201ENST00000362061 TTC12Q9H892 705 aaPredicted RBP11.98□□□□□ -0.49
CACNA1S-201ENST00000362061 TRIM37O94972 964 aa11.98□□□□□ -0.49
CACNA1S-201ENST00000362061 EP400NLQ6ZTU2 488 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms