RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 NHSQ6T4R5 1651 aa6.1□□□□□ -1.43
ATXN3-202ENST00000359366 RREB1Q92766 1687 aa6.1□□□□□ -1.43
ATXN3-202ENST00000359366 PDE8BO95263 885 aa6.1□□□□□ -1.43
ATXN3-202ENST00000359366 LARGE1O95461 756 aa6.1□□□□□ -1.43
ATXN3-202ENST00000359366 BCAMP50895 628 aa6.1□□□□□ -1.43
ATXN3-202ENST00000359366 AK2P54819 239 aa6.1□□□□□ -1.43
ATXN3-202ENST00000359366 WASHC4Q2M389 1173 aa6.1□□□□□ -1.43
ATXN3-202ENST00000359366 CCDC158Q5M9N0 1113 aa6.1□□□□□ -1.43
ATXN3-202ENST00000359366 KBTBD3Q8NAB2 608 aa6.1□□□□□ -1.43
ATXN3-202ENST00000359366 CELF1Q92879 486 aaKnown RBP6.1□□□□□ -1.43
ATXN3-202ENST00000359366 TNPO1Q92973 898 aaKnown RBP6.1□□□□□ -1.43
ATXN3-202ENST00000359366 AK7Q96M32 723 aa6.1□□□□□ -1.43
ATXN3-202ENST00000359366 LRRC2Q9BYS8 371 aa6.1□□□□□ -1.43
ATXN3-202ENST00000359366 ZNF652Q9Y2D9 606 aa6.1□□□□□ -1.43
ATXN3-202ENST00000359366 CNTNAP4Q9C0A0 1308 aa6.09□□□□□ -1.43
ATXN3-202ENST00000359366 MED23Q9ULK4 1368 aa6.09□□□□□ -1.43
ATXN3-202ENST00000359366 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.09□□□□□ -1.43
ATXN3-202ENST00000359366 SLC27A2O14975 620 aa6.09□□□□□ -1.43
ATXN3-202ENST00000359366 ONECUT3O60422 494 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-202ENST00000359366 RFC4P35249 363 aa6.09□□□□□ -1.43
ATXN3-202ENST00000359366 NECTIN1Q15223 517 aa6.09□□□□□ -1.43
ATXN3-202ENST00000359366 CCDC152Q4G0S7 254 aa6.09□□□□□ -1.43
ATXN3-202ENST00000359366 PARP10Q53GL7 1025 aa6.09□□□□□ -1.43
ATXN3-202ENST00000359366 TTLL5Q6EMB2 1281 aa6.09□□□□□ -1.43
ATXN3-202ENST00000359366 ANP32BQ92688 251 aaKnown RBP6.09□□□□□ -1.43
ATXN3-202ENST00000359366 OSBP2Q969R2 916 aa6.09□□□□□ -1.43
ATXN3-202ENST00000359366 SETDB2Q96T68 719 aa6.09□□□□□ -1.43
ATXN3-202ENST00000359366 GZF1Q9H116 711 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-202ENST00000359366 PDCL3Q9H2J4 239 aa6.09□□□□□ -1.43
ATXN3-202ENST00000359366 PIH1D3Q9NQM4 214 aaKnown RBP6.09□□□□□ -1.43
ATXN3-202ENST00000359366 NARFQ9UHQ1 456 aa6.09□□□□□ -1.43
ATXN3-202ENST00000359366 JAG2Q9Y219 1238 aa6.09□□□□□ -1.43
ATXN3-202ENST00000359366 AKAP2Q9Y2D5 859 aa6.09□□□□□ -1.43
ATXN3-202ENST00000359366 TAF1LQ8IZX4 1826 aa6.09□□□□□ -1.43
ATXN3-202ENST00000359366 BCORQ6W2J9 1755 aa6.09□□□□□ -1.44
ATXN3-202ENST00000359366 IDH1O75874 414 aaKnown RBP6.09□□□□□ -1.44
ATXN3-202ENST00000359366 CYP2E1P05181 493 aaPredicted RBP6.09□□□□□ -1.44
ATXN3-202ENST00000359366 KLRK1P26718 216 aa6.09□□□□□ -1.44
ATXN3-202ENST00000359366 CHRNDQ07001 517 aa6.09□□□□□ -1.44
ATXN3-202ENST00000359366 CCDC102BQ68D86 513 aa6.09□□□□□ -1.44
ATXN3-202ENST00000359366 RUFY3Q7L099 469 aa6.09□□□□□ -1.44
ATXN3-202ENST00000359366 MAP4K1Q92918 833 aa6.09□□□□□ -1.44
ATXN3-202ENST00000359366 GPR108Q9NPR9 543 aa6.09□□□□□ -1.44
ATXN3-202ENST00000359366 MAST3O60307 1309 aa6.08□□□□□ -1.44
ATXN3-202ENST00000359366 AKAP11Q9UKA4 1901 aa6.08□□□□□ -1.44
ATXN3-202ENST00000359366 CASZ1Q86V15 1759 aa6.08□□□□□ -1.44
ATXN3-202ENST00000359366 PPFIA3O75145 1194 aa6.08□□□□□ -1.44
ATXN3-202ENST00000359366 IGHMBP2P38935 993 aaKnown RBP6.08□□□□□ -1.44
ATXN3-202ENST00000359366 GYG1P46976 350 aa6.08□□□□□ -1.44
ATXN3-202ENST00000359366 HAND2P61296 217 aa6.08□□□□□ -1.44
ATXN3-202ENST00000359366 NFIXQ14938 502 aa6.08□□□□□ -1.44
ATXN3-202ENST00000359366 MCMDC2Q4G0Z9 681 aa6.08□□□□□ -1.44
ATXN3-202ENST00000359366 TRAPPC3LQ5T215 181 aa6.08□□□□□ -1.44
ATXN3-202ENST00000359366 CHST3Q7LGC8 479 aa6.08□□□□□ -1.44
ATXN3-202ENST00000359366 NECAB1Q8N987 351 aa6.08□□□□□ -1.44
ATXN3-202ENST00000359366 PUS7LQ9H0K6 701 aaKnown RBP6.08□□□□□ -1.44
ATXN3-202ENST00000359366 HIP1O00291 1037 aa6.08□□□□□ -1.44
ATXN3-202ENST00000359366 RNF113AO15541 343 aaKnown RBP6.08□□□□□ -1.44
ATXN3-202ENST00000359366 ANAPC15P60006 121 aa6.08□□□□□ -1.44
ATXN3-202ENST00000359366 STK3Q13188 491 aa6.08□□□□□ -1.44
ATXN3-202ENST00000359366 RASGRF1Q13972 1273 aa6.08□□□□□ -1.44
ATXN3-202ENST00000359366 PUM3Q15397 648 aaKnown RBP6.08□□□□□ -1.44
ATXN3-202ENST00000359366 CLEC4GQ6UXB4 293 aa6.08□□□□□ -1.44
ATXN3-202ENST00000359366 TTC14Q96N46 770 aa6.08□□□□□ -1.44
ATXN3-202ENST00000359366 GPR101Q96P66 508 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-202ENST00000359366 WWC3Q9ULE0 1092 aa6.08□□□□□ -1.44
ATXN3-202ENST00000359366 C4BP0C0L5 1744 aa6.08□□□□□ -1.44
ATXN3-202ENST00000359366 LY75O60449 1722 aa6.07□□□□□ -1.44
ATXN3-202ENST00000359366 CYP21A2P08686 494 aa6.07□□□□□ -1.44
ATXN3-202ENST00000359366 MCM4P33991 863 aa6.07□□□□□ -1.44
ATXN3-202ENST00000359366 IRX5P78411 483 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-202ENST00000359366 ZMYM1Q5SVZ6 1142 aa6.07□□□□□ -1.44
ATXN3-202ENST00000359366 SLC9C2Q5TAH2 1124 aa6.07□□□□□ -1.44
ATXN3-202ENST00000359366 RC3H1Q5TC82 1133 aaKnown RBP6.07□□□□□ -1.44
ATXN3-202ENST00000359366 STOX1Q6ZVD7 989 aa6.07□□□□□ -1.44
ATXN3-202ENST00000359366 STK11IPQ8N1F8 1099 aa6.07□□□□□ -1.44
ATXN3-202ENST00000359366 ZFP91Q96JP5 570 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-202ENST00000359366 PDRG1Q9NUG6 133 aa6.07□□□□□ -1.44
ATXN3-202ENST00000359366 PLA2G2EQ9NZK7 142 aa6.07□□□□□ -1.44
ATXN3-202ENST00000359366 HMG20BQ9P0W2 317 aa6.07□□□□□ -1.44
ATXN3-202ENST00000359366 DENND2AQ9ULE3 1009 aa6.07□□□□□ -1.44
ATXN3-202ENST00000359366 ZDHHC9Q9Y397 364 aa6.07□□□□□ -1.44
ATXN3-202ENST00000359366 C4AP0C0L4 1744 aa6.07□□□□□ -1.44
ATXN3-202ENST00000359366 FOXP2O15409 715 aa6.07□□□□□ -1.44
ATXN3-202ENST00000359366 ZKSCAN1P17029 563 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-202ENST00000359366 FGFR2P21802 821 aa6.07□□□□□ -1.44
ATXN3-202ENST00000359366 RAB3GAP1Q15042 981 aa6.07□□□□□ -1.44
ATXN3-202ENST00000359366 ANKRD18AQ8IVF6 992 aa6.07□□□□□ -1.44
ATXN3-202ENST00000359366 CCDC83Q8IWF9 413 aa6.07□□□□□ -1.44
ATXN3-202ENST00000359366 LPIN2Q92539 896 aa6.07□□□□□ -1.44
ATXN3-202ENST00000359366 TFCP2L1Q9NZI6 479 aa6.07□□□□□ -1.44
ATXN3-202ENST00000359366 MROH5Q6ZUA9 1318 aa6.07□□□□□ -1.44
ATXN3-202ENST00000359366 SCN7AQ01118 1682 aa6.06□□□□□ -1.44
ATXN3-202ENST00000359366 LAMB2P55268 1798 aa6.06□□□□□ -1.44
ATXN3-202ENST00000359366 APBA3O96018 575 aa6.06□□□□□ -1.44
ATXN3-202ENST00000359366 HSPD1P10809 573 aaKnown RBP6.06□□□□□ -1.44
ATXN3-202ENST00000359366 SLC5A1P13866 664 aa6.06□□□□□ -1.44
ATXN3-202ENST00000359366 GSE1Q14687 1217 aa6.06□□□□□ -1.44
ATXN3-202ENST00000359366 TXNRD1Q16881 649 aa6.06□□□□□ -1.44
ATXN3-202ENST00000359366 ZNF827Q17R98 1081 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms