RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 ERICH4A6NGS2 130 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 ALDH3A1P30838 453 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 AFAP1L1Q8TED9 768 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 TCHHQ07283 1943 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 TNNC1P63316 161 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 FERMT2Q96AC1 680 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 TUBB6Q9BUF5 446 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 TFIP11Q9UBB9 837 aaKnown RBP4.66□□□□□ -1.66
SYNE2-204ENST00000358025 SSH3Q8TE77 659 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 AIMP1Q12904 312 aaKnown RBP4.66□□□□□ -1.66
SYNE2-204ENST00000358025 FBXL16Q8N461 479 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 MTA3Q9BTC8 594 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 GPR108Q9NPR9 543 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 POLKQ9UBT6 870 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 PPP1R12BO60237 982 aaPredicted RBP4.66□□□□□ -1.66
SYNE2-204ENST00000358025 NEURL4Q96JN8 1562 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 ADGBQ8N7X0 1667 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 CHUKO15111 745 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 HMOX1P09601 288 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 NEDD9Q14511 834 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 PLCB4Q15147 1175 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 RBM43Q6ZSC3 357 aaKnown RBP4.66□□□□□ -1.66
SYNE2-204ENST00000358025 CTNNBL1Q8WYA6 563 aaPredicted RBP4.66□□□□□ -1.66
SYNE2-204ENST00000358025 PSMD1Q99460 953 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 RAPGEF6Q8TEU7 1601 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 FANCAO15360 1455 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 RHPN1Q8TCX5 695 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 WHAMMQ8TF30 809 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 MAP4K1Q92918 833 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 H2AFXP16104 143 aaPredicted RBP4.66□□□□□ -1.66
SYNE2-204ENST00000358025 PLCD1P51178 756 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 TRIM7Q9C029 511 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 PRDM4Q9UKN5 801 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 TRIM75PA6NK02 468 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 USP42Q9H9J4 1324 aaKnown RBP4.66□□□□□ -1.66
SYNE2-204ENST00000358025 BRD2P25440 801 aaKnown RBP4.66□□□□□ -1.66
SYNE2-204ENST00000358025 RILPL1Q5EBL4 403 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 NCOA7Q8NI08 942 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 IFNKQ9P0W0 207 aa4.66□□□□□ -1.66
SYNE2-204ENST00000358025 ACTN4O43707 911 aaKnown RBP4.65□□□□□ -1.66
SYNE2-204ENST00000358025 SLFN14P0C7P3 912 aa4.65□□□□□ -1.66
SYNE2-204ENST00000358025 CALM1P0DP23 149 aa4.65□□□□□ -1.66
SYNE2-204ENST00000358025 CALM2P0DP24 149 aa4.65□□□□□ -1.66
SYNE2-204ENST00000358025 CALM3P0DP25 149 aa4.65□□□□□ -1.66
SYNE2-204ENST00000358025 ANXA13P27216 316 aa4.65□□□□□ -1.66
SYNE2-204ENST00000358025 GFM2Q969S9 779 aaKnown RBP4.65□□□□□ -1.66
SYNE2-204ENST00000358025 SPG7Q9UQ90 795 aa4.65□□□□□ -1.66
SYNE2-204ENST00000358025 CNPY2Q9Y2B0 182 aa4.65□□□□□ -1.66
SYNE2-204ENST00000358025 BZW2Q9Y6E2 419 aaKnown RBP4.65□□□□□ -1.66
SYNE2-204ENST00000358025 AK2P54819 239 aa4.65□□□□□ -1.66
SYNE2-204ENST00000358025 SUGP1Q8IWZ8 645 aaKnown RBP4.65□□□□□ -1.66
SYNE2-204ENST00000358025 ZGPATQ8N5A5 531 aaKnown RBP4.65□□□□□ -1.66
SYNE2-204ENST00000358025 EMBQ6PCB8 327 aa4.65□□□□□ -1.66
SYNE2-204ENST00000358025 GLT8D2Q9H1C3 349 aa4.65□□□□□ -1.66
SYNE2-204ENST00000358025 RNASELQ05823 741 aaKnown RBP4.65□□□□□ -1.66
SYNE2-204ENST00000358025 NBPF14Q5TI25 921 aa4.65□□□□□ -1.66
SYNE2-204ENST00000358025 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.65□□□□□ -1.66
SYNE2-204ENST00000358025 STIM2Q9P246 746 aa4.65□□□□□ -1.66
SYNE2-204ENST00000358025 PLEKHG1Q9ULL1 1385 aa4.65□□□□□ -1.66
SYNE2-204ENST00000358025 ENOX1Q8TC92 643 aaKnown RBP4.65□□□□□ -1.66
SYNE2-204ENST00000358025 TRIM34Q9BYJ4 488 aa4.65□□□□□ -1.66
SYNE2-204ENST00000358025 RSPH14Q9UHP6 348 aa4.65□□□□□ -1.66
SYNE2-204ENST00000358025 PPP6R2O75170 966 aa4.65□□□□□ -1.66
SYNE2-204ENST00000358025 PLA2G4DQ86XP0 818 aa4.65□□□□□ -1.66
SYNE2-204ENST00000358025 SWT1Q5T5J6 900 aaKnown RBP4.65□□□□□ -1.66
SYNE2-204ENST00000358025 SULT6B1Q6IMI4 303 aa4.65□□□□□ -1.66
SYNE2-204ENST00000358025 CCDC129Q6ZRS4 1044 aa4.65□□□□□ -1.66
SYNE2-204ENST00000358025 ATP2B1P20020 1258 aa4.65□□□□□ -1.66
SYNE2-204ENST00000358025 SSRP1Q08945 709 aaKnown RBP4.65□□□□□ -1.66
SYNE2-204ENST00000358025 CABS1Q96KC9 395 aa4.65□□□□□ -1.66
SYNE2-204ENST00000358025 AK9Q5TCS8 1911 aa4.65□□□□□ -1.66
SYNE2-204ENST00000358025 ATP5JP18859 108 aa4.65□□□□□ -1.67
SYNE2-204ENST00000358025 U2AF2P26368 475 aaKnown RBP eCLIP4.65□□□□□ -1.67
SYNE2-204ENST00000358025 EPS15P42566 896 aa4.65□□□□□ -1.67
SYNE2-204ENST00000358025 LMNTD2Q8IXW0 634 aa4.65□□□□□ -1.67
SYNE2-204ENST00000358025 ANO1Q5XXA6 986 aa4.65□□□□□ -1.67
SYNE2-204ENST00000358025 KRI1Q8N9T8 703 aaKnown RBP4.65□□□□□ -1.67
SYNE2-204ENST00000358025 CCDC77Q9BR77 488 aa4.65□□□□□ -1.67
SYNE2-204ENST00000358025 PTCH1Q13635 1447 aa4.65□□□□□ -1.67
SYNE2-204ENST00000358025 WASLO00401 505 aaPredicted RBP4.65□□□□□ -1.67
SYNE2-204ENST00000358025 RBM26Q5T8P6 1007 aaKnown RBP4.65□□□□□ -1.67
SYNE2-204ENST00000358025 SPATA1Q5VX52 437 aa4.65□□□□□ -1.67
SYNE2-204ENST00000358025 UBAC1Q9BSL1 405 aa4.65□□□□□ -1.67
SYNE2-204ENST00000358025 CNOT10Q9H9A5 744 aaKnown RBP4.65□□□□□ -1.67
SYNE2-204ENST00000358025 LRCH2Q5VUJ6 765 aa4.65□□□□□ -1.67
SYNE2-204ENST00000358025 SYCE1Q8N0S2 351 aa4.65□□□□□ -1.67
SYNE2-204ENST00000358025 VEZTQ9HBM0 779 aa4.65□□□□□ -1.67
SYNE2-204ENST00000358025 MAP2K1Q02750 393 aaPredicted RBP4.65□□□□□ -1.67
SYNE2-204ENST00000358025 NUTM2BA6NNL0 878 aaPredicted RBP4.65□□□□□ -1.67
SYNE2-204ENST00000358025 NUTM2EB1AL46 878 aaPredicted RBP4.65□□□□□ -1.67
SYNE2-204ENST00000358025 RASSF8Q8NHQ8 419 aa4.65□□□□□ -1.67
SYNE2-204ENST00000358025 RAPGEF4Q8WZA2 1011 aa4.65□□□□□ -1.67
SYNE2-204ENST00000358025 CKAP2LQ8IYA6 745 aa4.65□□□□□ -1.67
SYNE2-204ENST00000358025 SMARCC2Q8TAQ2 1214 aa4.65□□□□□ -1.67
SYNE2-204ENST00000358025 KDM5BQ9UGL1 1544 aa4.65□□□□□ -1.67
SYNE2-204ENST00000358025 NAP1L1P55209 391 aaKnown RBP4.64□□□□□ -1.67
SYNE2-204ENST00000358025 RRS1Q15050 365 aaKnown RBP4.64□□□□□ -1.67
SYNE2-204ENST00000358025 NDUFAB1O14561 156 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 DNM2P50570 870 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 TSG101Q99816 390 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms