RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 STK38Q15208 465 aa23.9■■□□□ 1.42
COL13A1-202ENST00000357811 TNS3Q68CZ2 1445 aa23.9■■□□□ 1.42
COL13A1-202ENST00000357811 INCENPQ9NQS7 918 aa23.9■■□□□ 1.42
COL13A1-202ENST00000357811 ALS2Q96Q42 1657 aa23.9■■□□□ 1.42
COL13A1-202ENST00000357811 RFX7Q2KHR2 1363 aa23.9■■□□□ 1.42
COL13A1-202ENST00000357811 METTL24Q5JXM2 366 aa23.89■■□□□ 1.42
COL13A1-202ENST00000357811 HELBQ8NG08 1087 aaPredicted RBP23.89■■□□□ 1.42
COL13A1-202ENST00000357811 TRMT1Q9NXH9 659 aaKnown RBP23.89■■□□□ 1.42
COL13A1-202ENST00000357811 IDH1O75874 414 aaKnown RBP23.89■■□□□ 1.41
COL13A1-202ENST00000357811 IFIT5Q13325 482 aaKnown RBP23.89■■□□□ 1.41
COL13A1-202ENST00000357811 STX1AQ16623 288 aa23.89■■□□□ 1.41
COL13A1-202ENST00000357811 TPD52L1Q16890 204 aaPredicted RBP23.89■■□□□ 1.41
COL13A1-202ENST00000357811 USP27XA6NNY8 438 aa23.88■■□□□ 1.41
COL13A1-202ENST00000357811 GPAA1O43292 621 aa23.88■■□□□ 1.41
COL13A1-202ENST00000357811 FAM160A1Q05DH4 1040 aa23.88■■□□□ 1.41
COL13A1-202ENST00000357811 RALYLQ86SE5 291 aaKnown RBP23.88■■□□□ 1.41
COL13A1-202ENST00000357811 AGXT2Q9BYV1 514 aa23.88■■□□□ 1.41
COL13A1-202ENST00000357811 GPR108Q9NPR9 543 aa23.88■■□□□ 1.41
COL13A1-202ENST00000357811 ZNF142P52746 1687 aaPredicted RBP23.88■■□□□ 1.41
COL13A1-202ENST00000357811 SNAP23O00161 211 aa23.88■■□□□ 1.41
COL13A1-202ENST00000357811 TNNT1P13805 278 aa23.88■■□□□ 1.41
COL13A1-202ENST00000357811 MARCKSP29966 332 aaPredicted RBP23.88■■□□□ 1.41
COL13A1-202ENST00000357811 CBX1P83916 185 aa23.88■■□□□ 1.41
COL13A1-202ENST00000357811 TCIRG1Q13488 830 aa23.88■■□□□ 1.41
COL13A1-202ENST00000357811 HLFQ16534 295 aa23.88■■□□□ 1.41
COL13A1-202ENST00000357811 WDR17Q8IZU2 1322 aa23.88■■□□□ 1.41
COL13A1-202ENST00000357811 SALL1Q9NSC2 1324 aa23.88■■□□□ 1.41
COL13A1-202ENST00000357811 SPDYE4A6NLX3 237 aa23.88■■□□□ 1.41
COL13A1-202ENST00000357811 IL2RBP14784 551 aa23.88■■□□□ 1.41
COL13A1-202ENST00000357811 LDHAL6AQ6ZMR3 332 aa23.88■■□□□ 1.41
COL13A1-202ENST00000357811 ZNF274Q96GC6 653 aaPredicted RBP23.88■■□□□ 1.41
COL13A1-202ENST00000357811 GREM2Q9H772 168 aa23.87■■□□□ 1.41
COL13A1-202ENST00000357811 LAMA4Q16363 1823 aa23.87■■□□□ 1.41
COL13A1-202ENST00000357811 ANTXR2P58335 489 aa23.87■■□□□ 1.41
COL13A1-202ENST00000357811 ENGASEQ8NFI3 743 aa23.87■■□□□ 1.41
COL13A1-202ENST00000357811 TMOD3Q9NYL9 352 aa23.87■■□□□ 1.41
COL13A1-202ENST00000357811 KIF28PB7ZC32 967 aa23.86■■□□□ 1.41
COL13A1-202ENST00000357811 ZNF213O14771 459 aa23.86■■□□□ 1.41
COL13A1-202ENST00000357811 PPP4R3BQ5MIZ7 849 aa23.86■■□□□ 1.41
COL13A1-202ENST00000357811 SYTL4Q96C24 671 aaPredicted RBP23.86■■□□□ 1.41
COL13A1-202ENST00000357811 SENP2Q9HC62 589 aa23.86■■□□□ 1.41
COL13A1-202ENST00000357811 BRINP3Q76B58 766 aa23.86■■□□□ 1.41
COL13A1-202ENST00000357811 DHX40Q8IX18 779 aaKnown RBP23.86■■□□□ 1.41
COL13A1-202ENST00000357811 MYL10Q9BUA6 226 aa23.86■■□□□ 1.41
COL13A1-202ENST00000357811 HPS5Q9UPZ3 1129 aa23.86■■□□□ 1.41
COL13A1-202ENST00000357811 ERVV-2B6SEH9 535 aa23.85■■□□□ 1.41
COL13A1-202ENST00000357811 UBE2Q2LH0YL09 131 aa23.85■■□□□ 1.41
COL13A1-202ENST00000357811 MCAMP43121 646 aa23.85■■□□□ 1.41
COL13A1-202ENST00000357811 SLC9C2Q5TAH2 1124 aa23.85■■□□□ 1.41
COL13A1-202ENST00000357811 MRPS27Q92552 414 aaKnown RBP23.85■■□□□ 1.41
COL13A1-202ENST00000357811 CNNM1Q9NRU3 951 aa23.85■■□□□ 1.41
COL13A1-202ENST00000357811 ATP2B3Q16720 1220 aa23.85■■□□□ 1.41
COL13A1-202ENST00000357811 DPCR1Q3MIW9 517 aa23.85■■□□□ 1.41
COL13A1-202ENST00000357811 COL18A1P39060 1754 aa23.85■■□□□ 1.41
COL13A1-202ENST00000357811 CIAO1O76071 339 aa23.85■■□□□ 1.41
COL13A1-202ENST00000357811 PHKBQ93100 1093 aa23.85■■□□□ 1.41
COL13A1-202ENST00000357811 ISCA1Q9BUE6 129 aa23.85■■□□□ 1.41
COL13A1-202ENST00000357811 ITGA6P23229 1130 aa23.84■■□□□ 1.41
COL13A1-202ENST00000357811 KIF6Q6ZMV9 814 aa23.84■■□□□ 1.41
COL13A1-202ENST00000357811 CTNNA3Q9UI47 895 aa23.84■■□□□ 1.41
COL13A1-202ENST00000357811 ZRSR1Q15695 479 aaKnown RBP23.83■■□□□ 1.41
COL13A1-202ENST00000357811 MICU3Q86XE3 530 aa23.83■■□□□ 1.41
COL13A1-202ENST00000357811 AKAP2Q9Y2D5 859 aa23.83■■□□□ 1.41
COL13A1-202ENST00000357811 GTF2F1P35269 517 aaKnown RBP eCLIP23.83■■□□□ 1.41
COL13A1-202ENST00000357811 LRRC8AQ8IWT6 810 aa23.83■■□□□ 1.41
COL13A1-202ENST00000357811 FMR1NBQ8N0W7 255 aaPredicted RBP23.83■■□□□ 1.41
COL13A1-202ENST00000357811 LINC00301Q8NCQ3 95 aa23.83■■□□□ 1.41
COL13A1-202ENST00000357811 NCOA7Q8NI08 942 aa23.83■■□□□ 1.41
COL13A1-202ENST00000357811 APPBP2Q92624 585 aa23.83■■□□□ 1.41
COL13A1-202ENST00000357811 ANO10Q9NW15 660 aa23.83■■□□□ 1.41
COL13A1-202ENST00000357811 KIF1AQ12756 1690 aa23.83■■□□□ 1.4
COL13A1-202ENST00000357811 PTPN21Q16825 1174 aa23.82■■□□□ 1.4
COL13A1-202ENST00000357811 MB21D2Q8IYB1 491 aaPredicted RBP23.82■■□□□ 1.4
COL13A1-202ENST00000357811 SKILP12757 684 aa23.82■■□□□ 1.4
COL13A1-202ENST00000357811 SYNE3Q6ZMZ3 975 aa23.82■■□□□ 1.4
COL13A1-202ENST00000357811 CEP57L1Q8IYX8 460 aa23.82■■□□□ 1.4
COL13A1-202ENST00000357811 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.82■■□□□ 1.4
COL13A1-202ENST00000357811 V9GYY5 206 aaPredicted RBP23.82■■□□□ 1.4
COL13A1-202ENST00000357811 FBXO18Q8NFZ0 1043 aa23.82■■□□□ 1.4
COL13A1-202ENST00000357811 PIGBQ92521 554 aa23.82■■□□□ 1.4
COL13A1-202ENST00000357811 B4E1Z4 1266 aa23.81■■□□□ 1.4
COL13A1-202ENST00000357811 CTAGE5O15320 804 aa23.81■■□□□ 1.4
COL13A1-202ENST00000357811 TBC1D10CQ8IV04 446 aa23.81■■□□□ 1.4
COL13A1-202ENST00000357811 TBC1D2BQ9UPU7 963 aa23.81■■□□□ 1.4
COL13A1-202ENST00000357811 CCDC69A6NI79 296 aa23.81■■□□□ 1.4
COL13A1-202ENST00000357811 SPTLC2O15270 562 aa23.81■■□□□ 1.4
COL13A1-202ENST00000357811 SMC2O95347 1197 aa23.81■■□□□ 1.4
COL13A1-202ENST00000357811 MTERF4Q7Z6M4 381 aaKnown RBP23.81■■□□□ 1.4
COL13A1-202ENST00000357811 MYSM1Q5VVJ2 828 aa23.8■■□□□ 1.4
COL13A1-202ENST00000357811 CYB5R4Q7L1T6 521 aa23.8■■□□□ 1.4
COL13A1-202ENST00000357811 PDCL2Q8N4E4 241 aa23.8■■□□□ 1.4
COL13A1-202ENST00000357811 CCDC82Q8N4S0 544 aa23.8■■□□□ 1.4
COL13A1-202ENST00000357811 CCDC94Q9BW85 323 aaPredicted RBP23.8■■□□□ 1.4
COL13A1-202ENST00000357811 PIH1D3Q9NQM4 214 aaKnown RBP23.8■■□□□ 1.4
COL13A1-202ENST00000357811 GLI3P10071 1580 aa23.8■■□□□ 1.4
COL13A1-202ENST00000357811 U2AF2P26368 475 aaKnown RBP eCLIP23.8■■□□□ 1.4
COL13A1-202ENST00000357811 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.8■■□□□ 1.4
COL13A1-202ENST00000357811 NBPF3Q9H094 633 aa23.8■■□□□ 1.4
COL13A1-202ENST00000357811 LMTK3Q96Q04 1460 aa23.8■■□□□ 1.4
COL13A1-202ENST00000357811 ADALQ6DHV7 355 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms