RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 NAP1L3Q99457 506 aaPredicted RBP13.66□□□□□ -0.22
COL12A1-202ENST00000345356 RIPOR2Q9Y4F9 1068 aa13.66□□□□□ -0.22
COL12A1-202ENST00000345356 CDC37L1Q7L3B6 337 aa13.66□□□□□ -0.22
COL12A1-202ENST00000345356 CHST3Q7LGC8 479 aa13.66□□□□□ -0.22
COL12A1-202ENST00000345356 VCXQ9H320 206 aa13.66□□□□□ -0.22
COL12A1-202ENST00000345356 PRC1O43663 620 aa13.66□□□□□ -0.22
COL12A1-202ENST00000345356 CCT5P48643 541 aa13.66□□□□□ -0.22
COL12A1-202ENST00000345356 NLRP12P59046 1061 aa13.66□□□□□ -0.22
COL12A1-202ENST00000345356 LMBR1Q8WVP7 490 aa13.66□□□□□ -0.22
COL12A1-202ENST00000345356 TACO1Q9BSH4 297 aaKnown RBP13.66□□□□□ -0.22
COL12A1-202ENST00000345356 PIK3C2GO75747 1445 aa13.66□□□□□ -0.22
COL12A1-202ENST00000345356 TTC41PQ6P2S7 1318 aa13.66□□□□□ -0.22
COL12A1-202ENST00000345356 KRI1Q8N9T8 703 aaKnown RBP13.66□□□□□ -0.22
COL12A1-202ENST00000345356 ADGRF5Q8IZF2 1346 aa13.65□□□□□ -0.22
COL12A1-202ENST00000345356 PPP2R5AQ15172 486 aa13.65□□□□□ -0.22
COL12A1-202ENST00000345356 CCDC38Q502W7 563 aa13.65□□□□□ -0.22
COL12A1-202ENST00000345356 NUDT16Q96DE0 195 aaKnown RBP13.65□□□□□ -0.22
COL12A1-202ENST00000345356 CAPS2Q9BXY5 557 aa13.65□□□□□ -0.22
COL12A1-202ENST00000345356 SPATS2LQ9NUQ6 558 aaKnown RBP13.65□□□□□ -0.22
COL12A1-202ENST00000345356 NRBP1Q9UHY1 535 aa13.65□□□□□ -0.22
COL12A1-202ENST00000345356 ATP8B1O43520 1251 aa13.65□□□□□ -0.22
COL12A1-202ENST00000345356 PTPRKQ15262 1439 aa13.65□□□□□ -0.22
COL12A1-202ENST00000345356 CCDC25Q86WR0 208 aa13.65□□□□□ -0.22
COL12A1-202ENST00000345356 IQCGQ9H095 443 aaKnown RBP13.65□□□□□ -0.22
COL12A1-202ENST00000345356 MED4Q9NPJ6 270 aa13.65□□□□□ -0.22
COL12A1-202ENST00000345356 MTRF1LQ9UGC7 380 aaKnown RBP13.65□□□□□ -0.22
COL12A1-202ENST00000345356 ZNF622Q969S3 477 aaKnown RBP eCLIP13.65□□□□□ -0.22
COL12A1-202ENST00000345356 JAKMIP2Q96AA8 810 aa13.65□□□□□ -0.22
COL12A1-202ENST00000345356 GIGYF1O75420 1035 aaPredicted RBP13.65□□□□□ -0.22
COL12A1-202ENST00000345356 PPANQ9NQ55 473 aaKnown RBP13.65□□□□□ -0.22
COL12A1-202ENST00000345356 TRIM75PA6NK02 468 aa13.64□□□□□ -0.23
COL12A1-202ENST00000345356 HGSO14964 777 aaPredicted RBP13.64□□□□□ -0.23
COL12A1-202ENST00000345356 ZC3H6P61129 1189 aaKnown RBP13.64□□□□□ -0.23
COL12A1-202ENST00000345356 SF3A3Q12874 501 aaKnown RBP eCLIP13.64□□□□□ -0.23
COL12A1-202ENST00000345356 ICE2Q659A1 982 aa13.64□□□□□ -0.23
COL12A1-202ENST00000345356 PLVAPQ9BX97 442 aa13.64□□□□□ -0.23
COL12A1-202ENST00000345356 CCDC61Q9Y6R9 512 aa13.64□□□□□ -0.23
COL12A1-202ENST00000345356 PER1O15534 1290 aaPredicted RBP13.64□□□□□ -0.23
COL12A1-202ENST00000345356 MFSD6Q6ZSS7 791 aa13.64□□□□□ -0.23
COL12A1-202ENST00000345356 VPS16Q9H269 839 aa13.64□□□□□ -0.23
COL12A1-202ENST00000345356 SYNJ2O15056 1496 aa13.64□□□□□ -0.23
COL12A1-202ENST00000345356 ZMYM3Q14202 1370 aa13.64□□□□□ -0.23
COL12A1-202ENST00000345356 DESP17661 470 aa13.64□□□□□ -0.23
COL12A1-202ENST00000345356 CETN1Q12798 172 aa13.64□□□□□ -0.23
COL12A1-202ENST00000345356 RUFY4Q6ZNE9 571 aa13.64□□□□□ -0.23
COL12A1-202ENST00000345356 SPATS2Q86XZ4 545 aaKnown RBP13.64□□□□□ -0.23
COL12A1-202ENST00000345356 MRFAP1L1Q96HT8 127 aa13.64□□□□□ -0.23
COL12A1-202ENST00000345356 STRN4Q9NRL3 753 aa13.64□□□□□ -0.23
COL12A1-202ENST00000345356 SLC8A1P32418 973 aa13.64□□□□□ -0.23
COL12A1-202ENST00000345356 TRIM14Q14142 442 aa13.64□□□□□ -0.23
COL12A1-202ENST00000345356 WHAMMP3Q1A5X7 153 aa13.64□□□□□ -0.23
COL12A1-202ENST00000345356 DHX32Q7L7V1 743 aaKnown RBP13.64□□□□□ -0.23
COL12A1-202ENST00000345356 FAM204AQ9H8W3 233 aa13.64□□□□□ -0.23
COL12A1-202ENST00000345356 ALDH3A1P30838 453 aa13.64□□□□□ -0.23
COL12A1-202ENST00000345356 PRPHP41219 470 aa13.64□□□□□ -0.23
COL12A1-202ENST00000345356 TMTC1Q8IUR5 882 aa13.64□□□□□ -0.23
COL12A1-202ENST00000345356 ANKRD18BA2A2Z9 1011 aa13.63□□□□□ -0.23
COL12A1-202ENST00000345356 MYO1CO00159 1063 aa13.63□□□□□ -0.23
COL12A1-202ENST00000345356 RPS6KB1P23443 525 aa13.63□□□□□ -0.23
COL12A1-202ENST00000345356 ASIC1P78348 528 aa13.63□□□□□ -0.23
COL12A1-202ENST00000345356 RBBP5Q15291 538 aaKnown RBP13.63□□□□□ -0.23
COL12A1-202ENST00000345356 DMRT2Q9Y5R5 561 aa13.63□□□□□ -0.23
COL12A1-202ENST00000345356 SNCBQ16143 134 aa13.63□□□□□ -0.23
COL12A1-202ENST00000345356 ZRANB1Q9UGI0 708 aa13.63□□□□□ -0.23
COL12A1-202ENST00000345356 A0A087WUV0 522 aaPredicted RBP13.63□□□□□ -0.23
COL12A1-202ENST00000345356 PPFIA4O75335 1185 aa13.63□□□□□ -0.23
COL12A1-202ENST00000345356 NKIRAS1Q9NYS0 192 aa13.63□□□□□ -0.23
COL12A1-202ENST00000345356 SMARCC2Q8TAQ2 1214 aa13.63□□□□□ -0.23
COL12A1-202ENST00000345356 MKNK2Q9HBH9 465 aa13.63□□□□□ -0.23
COL12A1-202ENST00000345356 PPP2R2CQ9Y2T4 447 aa13.63□□□□□ -0.23
COL12A1-202ENST00000345356 RNASE9P60153 205 aaKnown RBP13.62□□□□□ -0.23
COL12A1-202ENST00000345356 WTAPQ15007 396 aa13.62□□□□□ -0.23
COL12A1-202ENST00000345356 RTN1Q16799 776 aa13.62□□□□□ -0.23
COL12A1-202ENST00000345356 LRRC45Q96CN5 670 aa13.62□□□□□ -0.23
COL12A1-202ENST00000345356 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.62□□□□□ -0.23
COL12A1-202ENST00000345356 ADKP55263 362 aaKnown RBP13.62□□□□□ -0.23
COL12A1-202ENST00000345356 PAK2Q13177 524 aa13.62□□□□□ -0.23
COL12A1-202ENST00000345356 FBXO38Q6PIJ6 1188 aa13.62□□□□□ -0.23
COL12A1-202ENST00000345356 CTNND2Q9UQB3 1225 aa13.62□□□□□ -0.23
COL12A1-202ENST00000345356 ZNF202O95125 648 aa13.62□□□□□ -0.23
COL12A1-202ENST00000345356 ATP1A2P50993 1020 aa13.62□□□□□ -0.23
COL12A1-202ENST00000345356 CCDC26Q8TAB7 109 aa13.62□□□□□ -0.23
COL12A1-202ENST00000345356 SECISBP2LQ93073 1101 aaKnown RBP13.62□□□□□ -0.23
COL12A1-202ENST00000345356 FAM114A2Q9NRY5 505 aa13.62□□□□□ -0.23
COL12A1-202ENST00000345356 NFE2L3Q9Y4A8 694 aa13.62□□□□□ -0.23
COL12A1-202ENST00000345356 CLCN6P51797 869 aa13.62□□□□□ -0.23
COL12A1-202ENST00000345356 NCBP1Q09161 790 aaKnown RBP13.62□□□□□ -0.23
COL12A1-202ENST00000345356 NEDD9Q14511 834 aa13.62□□□□□ -0.23
COL12A1-202ENST00000345356 RABGGTAQ92696 567 aa13.62□□□□□ -0.23
COL12A1-202ENST00000345356 EXOC4Q96A65 974 aa13.62□□□□□ -0.23
COL12A1-202ENST00000345356 PPP1R13BQ96KQ4 1090 aa13.62□□□□□ -0.23
COL12A1-202ENST00000345356 SLF1Q9BQI6 1058 aa13.62□□□□□ -0.23
COL12A1-202ENST00000345356 DESI2Q9BSY9 194 aa13.62□□□□□ -0.23
COL12A1-202ENST00000345356 CNKSR2Q8WXI2 1034 aa13.62□□□□□ -0.23
COL12A1-202ENST00000345356 GOLGA8KD6RF30 607 aa13.61□□□□□ -0.23
COL12A1-202ENST00000345356 NR1I2O75469 434 aa13.61□□□□□ -0.23
COL12A1-202ENST00000345356 PPP1R7Q15435 360 aa13.61□□□□□ -0.23
COL12A1-202ENST00000345356 ANO1Q5XXA6 986 aa13.61□□□□□ -0.23
COL12A1-202ENST00000345356 JPH2Q9BR39 696 aaPredicted RBP13.61□□□□□ -0.23
COL12A1-202ENST00000345356 LRRC27Q9C0I9 530 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms