RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 PIBF1Q8WXW3 757 aa20.77■□□□□ 0.92
LRCH3-201ENST00000334859 MYH3P11055 1940 aa20.77■□□□□ 0.92
LRCH3-201ENST00000334859 ANKRD36CQ5JPF3 1778 aa20.77■□□□□ 0.92
LRCH3-201ENST00000334859 GOLGA8BA8MQT2 603 aa20.76■□□□□ 0.91
LRCH3-201ENST00000334859 DNTTIP2Q5QJE6 756 aaKnown RBP20.76■□□□□ 0.91
LRCH3-201ENST00000334859 ZNF396Q96N95 335 aaPredicted RBP20.76■□□□□ 0.91
LRCH3-201ENST00000334859 USP28Q96RU2 1077 aa20.76■□□□□ 0.91
LRCH3-201ENST00000334859 CBX8Q9HC52 389 aa20.76■□□□□ 0.91
LRCH3-201ENST00000334859 KLF18A0A0U1RQI7 1052 aa20.76■□□□□ 0.91
LRCH3-201ENST00000334859 ZNF213O14771 459 aa20.75■□□□□ 0.91
LRCH3-201ENST00000334859 MB21D2Q8IYB1 491 aaPredicted RBP20.75■□□□□ 0.91
LRCH3-201ENST00000334859 C17orf53Q8N3J3 647 aaPredicted RBP20.75■□□□□ 0.91
LRCH3-201ENST00000334859 NCOA7Q8NI08 942 aa20.75■□□□□ 0.91
LRCH3-201ENST00000334859 TBC1D2BQ9UPU7 963 aa20.75■□□□□ 0.91
LRCH3-201ENST00000334859 DISP2A7MBM2 1401 aa20.75■□□□□ 0.91
LRCH3-201ENST00000334859 IDH1O75874 414 aaKnown RBP20.75■□□□□ 0.91
LRCH3-201ENST00000334859 SLC9C2Q5TAH2 1124 aa20.75■□□□□ 0.91
LRCH3-201ENST00000334859 RAB11FIP4Q86YS3 637 aa20.75■□□□□ 0.91
LRCH3-201ENST00000334859 CCAR1Q8IX12 1150 aaKnown RBP20.75■□□□□ 0.91
LRCH3-201ENST00000334859 FBXL16Q8N461 479 aa20.75■□□□□ 0.91
LRCH3-201ENST00000334859 DNAJC25Q9H1X3 360 aa20.75■□□□□ 0.91
LRCH3-201ENST00000334859 RCOR1Q9UKL0 485 aa20.75■□□□□ 0.91
LRCH3-201ENST00000334859 UQCRHLA0A096LP55 91 aa20.74■□□□□ 0.91
LRCH3-201ENST00000334859 GOLGA6L6A8MZA4 724 aa20.74■□□□□ 0.91
LRCH3-201ENST00000334859 UQCRHP07919 91 aa20.74■□□□□ 0.91
LRCH3-201ENST00000334859 ZSCAN25Q6NSZ9 544 aa20.74■□□□□ 0.91
LRCH3-201ENST00000334859 CCDC73Q6ZRK6 1079 aa20.74■□□□□ 0.91
LRCH3-201ENST00000334859 FDPSP14324 419 aaKnown RBP20.74■□□□□ 0.91
LRCH3-201ENST00000334859 ME1P48163 572 aa20.74■□□□□ 0.91
LRCH3-201ENST00000334859 EVCP57679 992 aa20.74■□□□□ 0.91
LRCH3-201ENST00000334859 DZIP3Q86Y13 1208 aaKnown RBP20.74■□□□□ 0.91
LRCH3-201ENST00000334859 AKAP11Q9UKA4 1901 aa20.74■□□□□ 0.91
LRCH3-201ENST00000334859 DHX16O60231 1041 aaKnown RBP20.73■□□□□ 0.91
LRCH3-201ENST00000334859 ZNF165P49910 485 aa20.73■□□□□ 0.91
LRCH3-201ENST00000334859 NOLC1Q14978 699 aaKnown RBP eCLIP20.73■□□□□ 0.91
LRCH3-201ENST00000334859 VGLL2Q8N8G2 317 aa20.73■□□□□ 0.91
LRCH3-201ENST00000334859 A0A0G2JS52 829 aa20.73■□□□□ 0.91
LRCH3-201ENST00000334859 CPLX1O14810 134 aa20.73■□□□□ 0.91
LRCH3-201ENST00000334859 ADD2P35612 726 aa20.73■□□□□ 0.91
LRCH3-201ENST00000334859 ANTXR2P58335 489 aa20.73■□□□□ 0.91
LRCH3-201ENST00000334859 HSP90AA2PQ14568 343 aaPredicted RBP20.73■□□□□ 0.91
LRCH3-201ENST00000334859 TTF1Q15361 905 aaPredicted RBP20.73■□□□□ 0.91
LRCH3-201ENST00000334859 ATL3Q6DD88 541 aa20.73■□□□□ 0.91
LRCH3-201ENST00000334859 ILDR1Q86SU0 546 aaPredicted RBP20.73■□□□□ 0.91
LRCH3-201ENST00000334859 GOLPH3LQ9H4A5 285 aa20.73■□□□□ 0.91
LRCH3-201ENST00000334859 NUP98P52948 1817 aa20.72■□□□□ 0.91
LRCH3-201ENST00000334859 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.72■□□□□ 0.91
LRCH3-201ENST00000334859 PDE8AO60658 829 aa20.72■□□□□ 0.91
LRCH3-201ENST00000334859 PDE8BO95263 885 aa20.72■□□□□ 0.91
LRCH3-201ENST00000334859 APPP05067 770 aa20.72■□□□□ 0.91
LRCH3-201ENST00000334859 PIH1D3Q9NQM4 214 aaKnown RBP20.72■□□□□ 0.91
LRCH3-201ENST00000334859 UBN2Q6ZU65 1347 aa20.71■□□□□ 0.91
LRCH3-201ENST00000334859 EXOC5O00471 708 aa20.71■□□□□ 0.91
LRCH3-201ENST00000334859 PHKA1P46020 1223 aa20.71■□□□□ 0.91
LRCH3-201ENST00000334859 TRDNQ13061 729 aa20.71■□□□□ 0.91
LRCH3-201ENST00000334859 OTUD7BQ6GQQ9 843 aa20.71■□□□□ 0.91
LRCH3-201ENST00000334859 C8orf76Q96K31 380 aa20.71■□□□□ 0.91
LRCH3-201ENST00000334859 COL14A1Q05707 1796 aaKnown RBP20.71■□□□□ 0.91
LRCH3-201ENST00000334859 KINO60870 393 aaKnown RBP20.71■□□□□ 0.91
LRCH3-201ENST00000334859 TPM3P06753 285 aa20.71■□□□□ 0.91
LRCH3-201ENST00000334859 ORC3Q9UBD5 711 aaPredicted RBP20.71■□□□□ 0.91
LRCH3-201ENST00000334859 HPS5Q9UPZ3 1129 aa20.71■□□□□ 0.91
LRCH3-201ENST00000334859 RRP9O43818 475 aaKnown RBP20.7■□□□□ 0.9
LRCH3-201ENST00000334859 CCDC102BQ68D86 513 aa20.7■□□□□ 0.9
LRCH3-201ENST00000334859 HELBQ8NG08 1087 aaPredicted RBP20.7■□□□□ 0.9
LRCH3-201ENST00000334859 KCNF1Q9H3M0 494 aa20.7■□□□□ 0.9
LRCH3-201ENST00000334859 ATRNO75882 1429 aa20.7■□□□□ 0.9
LRCH3-201ENST00000334859 DRC7Q8IY82 874 aa20.7■□□□□ 0.9
LRCH3-201ENST00000334859 FSIP1Q8NA03 581 aa20.7■□□□□ 0.9
LRCH3-201ENST00000334859 TDRD7Q8NHU6 1098 aaKnown RBP20.7■□□□□ 0.9
LRCH3-201ENST00000334859 ZNF512BQ96KM6 892 aaPredicted RBP20.7■□□□□ 0.9
LRCH3-201ENST00000334859 TRIM5Q9C035 493 aa20.7■□□□□ 0.9
LRCH3-201ENST00000334859 ZNF532Q9HCE3 1301 aa20.69■□□□□ 0.9
LRCH3-201ENST00000334859 CTAGE5O15320 804 aa20.69■□□□□ 0.9
LRCH3-201ENST00000334859 IL6STP40189 918 aaPredicted RBP20.69■□□□□ 0.9
LRCH3-201ENST00000334859 PUM3Q15397 648 aaKnown RBP20.69■□□□□ 0.9
LRCH3-201ENST00000334859 MYO5AQ9Y4I1 1855 aaKnown RBP20.69■□□□□ 0.9
LRCH3-201ENST00000334859 DDX60Q8IY21 1712 aaKnown RBP20.69■□□□□ 0.9
LRCH3-201ENST00000334859 ERVV-1B6SEH8 477 aa20.69■□□□□ 0.9
LRCH3-201ENST00000334859 PDE6AP16499 860 aa20.69■□□□□ 0.9
LRCH3-201ENST00000334859 FAM160A1Q05DH4 1040 aa20.69■□□□□ 0.9
LRCH3-201ENST00000334859 TBC1D10CQ8IV04 446 aa20.69■□□□□ 0.9
LRCH3-201ENST00000334859 NBPF3Q9H094 633 aa20.69■□□□□ 0.9
LRCH3-201ENST00000334859 FAM177BA6PVY3 158 aa20.68■□□□□ 0.9
LRCH3-201ENST00000334859 POLR3DP05423 398 aaPredicted RBP20.68■□□□□ 0.9
LRCH3-201ENST00000334859 WWC3Q9ULE0 1092 aa20.68■□□□□ 0.9
LRCH3-201ENST00000334859 CAVIN2O95810 425 aa20.67■□□□□ 0.9
LRCH3-201ENST00000334859 UQCRFS1P1P0C7P4 283 aa20.67■□□□□ 0.9
LRCH3-201ENST00000334859 PTGS1P23219 599 aa20.67■□□□□ 0.9
LRCH3-201ENST00000334859 SNW1Q13573 536 aaKnown RBP20.67■□□□□ 0.9
LRCH3-201ENST00000334859 UBE3CQ15386 1083 aa20.67■□□□□ 0.9
LRCH3-201ENST00000334859 DENND2AQ9ULE3 1009 aa20.67■□□□□ 0.9
LRCH3-201ENST00000334859 PYCARDQ9ULZ3 195 aa20.67■□□□□ 0.9
LRCH3-201ENST00000334859 PLCH1Q4KWH8 1693 aa20.67■□□□□ 0.9
LRCH3-201ENST00000334859 WDR19Q8NEZ3 1342 aa20.67■□□□□ 0.9
LRCH3-201ENST00000334859 DOT1LQ8TEK3 1739 aa20.67■□□□□ 0.9
LRCH3-201ENST00000334859 ARID4AP29374 1257 aaPredicted RBP20.67■□□□□ 0.9
LRCH3-201ENST00000334859 STX1AQ16623 288 aa20.67■□□□□ 0.9
LRCH3-201ENST00000334859 FBXO18Q8NFZ0 1043 aa20.67■□□□□ 0.9
LRCH3-201ENST00000334859 LPIN2Q92539 896 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms