RNA–Protein interactions for RNA: ENST00000311066.9

PRDM2-202, Transcript of PR/SET domain 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM2, Length 7,437 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-202ENST00000311066 BEGAINQ9BUH8 593 aa7.57□□□□□ -1.2
PRDM2-202ENST00000311066 ARHGEF10LQ9HCE6 1279 aa7.57□□□□□ -1.2
PRDM2-202ENST00000311066 ATP2B4P23634 1241 aa7.57□□□□□ -1.2
PRDM2-202ENST00000311066 SPC24Q8NBT2 197 aa7.57□□□□□ -1.2
PRDM2-202ENST00000311066 ARMT1Q9H993 441 aa7.57□□□□□ -1.2
PRDM2-202ENST00000311066 TICAM2Q86XR7 235 aa7.57□□□□□ -1.2
PRDM2-202ENST00000311066 SMC5Q8IY18 1101 aa7.57□□□□□ -1.2
PRDM2-202ENST00000311066 BIN2Q9UBW5 565 aaPredicted RBP7.57□□□□□ -1.2
PRDM2-202ENST00000311066 ADGRL3Q9HAR2 1447 aa7.57□□□□□ -1.2
PRDM2-202ENST00000311066 CALML3P27482 149 aa7.56□□□□□ -1.2
PRDM2-202ENST00000311066 CFAP100Q494V2 611 aa7.56□□□□□ -1.2
PRDM2-202ENST00000311066 EAPPQ56P03 285 aaPredicted RBP7.56□□□□□ -1.2
PRDM2-202ENST00000311066 NECAB1Q8N987 351 aa7.56□□□□□ -1.2
PRDM2-202ENST00000311066 SPATA5Q8NB90 893 aa7.56□□□□□ -1.2
PRDM2-202ENST00000311066 TSPYL1Q9H0U9 437 aa7.56□□□□□ -1.2
PRDM2-202ENST00000311066 ACBD3Q9H3P7 528 aa7.56□□□□□ -1.2
PRDM2-202ENST00000311066 ZBTB1Q9Y2K1 713 aa7.56□□□□□ -1.2
PRDM2-202ENST00000311066 CTAGE5O15320 804 aa7.56□□□□□ -1.2
PRDM2-202ENST00000311066 NEBLO76041 1014 aa7.56□□□□□ -1.2
PRDM2-202ENST00000311066 PARP1P09874 1014 aaKnown RBP7.56□□□□□ -1.2
PRDM2-202ENST00000311066 TNNT1P13805 278 aa7.56□□□□□ -1.2
PRDM2-202ENST00000311066 CETN1Q12798 172 aa7.56□□□□□ -1.2
PRDM2-202ENST00000311066 ZSCAN16Q9H4T2 348 aaPredicted RBP7.56□□□□□ -1.2
PRDM2-202ENST00000311066 ZNF397Q8NF99 534 aaPredicted RBP7.56□□□□□ -1.2
PRDM2-202ENST00000311066 SPDYE4A6NLX3 237 aa7.56□□□□□ -1.2
PRDM2-202ENST00000311066 TNFAIP1Q13829 316 aa7.56□□□□□ -1.2
PRDM2-202ENST00000311066 ENOX2Q16206 610 aaKnown RBP7.56□□□□□ -1.2
PRDM2-202ENST00000311066 APPBP2Q92624 585 aa7.56□□□□□ -1.2
PRDM2-202ENST00000311066 KDRP35968 1356 aa7.56□□□□□ -1.2
PRDM2-202ENST00000311066 ZBTB38Q8NAP3 1195 aaPredicted RBP7.56□□□□□ -1.2
PRDM2-202ENST00000311066 DDX19AQ9NUU7 478 aaKnown RBP7.56□□□□□ -1.2
PRDM2-202ENST00000311066 ECM2O94769 699 aaPredicted RBP7.56□□□□□ -1.2
PRDM2-202ENST00000311066 GTF2IP78347 998 aa7.56□□□□□ -1.2
PRDM2-202ENST00000311066 PRKG1Q13976 671 aa7.56□□□□□ -1.2
PRDM2-202ENST00000311066 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.56□□□□□ -1.2
PRDM2-202ENST00000311066 PANK2Q9BZ23 570 aa7.56□□□□□ -1.2
PRDM2-202ENST00000311066 TFIP11Q9UBB9 837 aaKnown RBP7.56□□□□□ -1.2
PRDM2-202ENST00000311066 GNA11P29992 359 aa7.55□□□□□ -1.2
PRDM2-202ENST00000311066 CREB3L3Q68CJ9 461 aa7.55□□□□□ -1.2
PRDM2-202ENST00000311066 PLEKHM2Q8IWE5 1019 aa7.55□□□□□ -1.2
PRDM2-202ENST00000311066 SYCP3Q8IZU3 236 aa7.55□□□□□ -1.2
PRDM2-202ENST00000311066 TTC16Q8NEE8 873 aa7.55□□□□□ -1.2
PRDM2-202ENST00000311066 TMX3Q96JJ7 454 aa7.55□□□□□ -1.2
PRDM2-202ENST00000311066 TBC1D2Q9BYX2 928 aa7.55□□□□□ -1.2
PRDM2-202ENST00000311066 SERPINB2P05120 415 aa7.55□□□□□ -1.2
PRDM2-202ENST00000311066 KANK3Q6NY19 840 aa7.55□□□□□ -1.2
PRDM2-202ENST00000311066 DHX32Q7L7V1 743 aaKnown RBP7.55□□□□□ -1.2
PRDM2-202ENST00000311066 BICD1Q96G01 975 aa7.55□□□□□ -1.2
PRDM2-202ENST00000311066 CCDC40Q4G0X9 1142 aa7.55□□□□□ -1.2
PRDM2-202ENST00000311066 RBM28Q9NW13 759 aaKnown RBP7.55□□□□□ -1.2
PRDM2-202ENST00000311066 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.55□□□□□ -1.2
PRDM2-202ENST00000311066 CHMLP26374 656 aa7.55□□□□□ -1.2
PRDM2-202ENST00000311066 SSFA2P28290 1259 aa7.55□□□□□ -1.2
PRDM2-202ENST00000311066 RBM10P98175 930 aaKnown RBP7.55□□□□□ -1.2
PRDM2-202ENST00000311066 GIGYF2Q6Y7W6 1299 aaKnown RBP7.55□□□□□ -1.2
PRDM2-202ENST00000311066 USP48Q86UV5 1035 aa7.55□□□□□ -1.2
PRDM2-202ENST00000311066 AATFQ9NY61 560 aaKnown RBP eCLIP7.55□□□□□ -1.2
PRDM2-202ENST00000311066 RBM6P78332 1123 aaKnown RBP7.55□□□□□ -1.2
PRDM2-202ENST00000311066 MFSD14BQ5SR56 506 aa7.55□□□□□ -1.2
PRDM2-202ENST00000311066 CCDC102BQ68D86 513 aa7.55□□□□□ -1.2
PRDM2-202ENST00000311066 CACNA2D4Q7Z3S7 1137 aa7.55□□□□□ -1.2
PRDM2-202ENST00000311066 VPS36Q86VN1 386 aa7.55□□□□□ -1.2
PRDM2-202ENST00000311066 IVNS1ABPQ9Y6Y0 642 aa7.55□□□□□ -1.2
PRDM2-202ENST00000311066 CCDC183Q5T5S1 534 aa7.55□□□□□ -1.2
PRDM2-202ENST00000311066 CCDC181Q5TID7 509 aa7.55□□□□□ -1.2
PRDM2-202ENST00000311066 SSR1P43307 286 aaKnown RBP7.54□□□□□ -1.2
PRDM2-202ENST00000311066 TMC4Q7Z404 712 aa7.54□□□□□ -1.2
PRDM2-202ENST00000311066 TEKT1Q969V4 418 aa7.54□□□□□ -1.2
PRDM2-202ENST00000311066 TBC1D32Q96NH3 1257 aa7.54□□□□□ -1.2
PRDM2-202ENST00000311066 NAP1L4Q99733 375 aaKnown RBP7.54□□□□□ -1.2
PRDM2-202ENST00000311066 TCERG1LQ5VWI1 586 aa7.54□□□□□ -1.2
PRDM2-202ENST00000311066 FILIP1Q7Z7B0 1213 aa7.54□□□□□ -1.2
PRDM2-202ENST00000311066 TTF2Q9UNY4 1162 aaKnown RBP7.54□□□□□ -1.2
PRDM2-202ENST00000311066 AOX1Q06278 1338 aa7.54□□□□□ -1.2
PRDM2-202ENST00000311066 TSPOAP1O95153 1857 aa7.54□□□□□ -1.2
PRDM2-202ENST00000311066 EPB41L2O43491 1005 aaKnown RBP7.54□□□□□ -1.2
PRDM2-202ENST00000311066 MAPKAPK5Q8IW41 473 aa7.54□□□□□ -1.2
PRDM2-202ENST00000311066 FAM43AQ8N2R8 423 aa7.54□□□□□ -1.2
PRDM2-202ENST00000311066 CETN2P41208 172 aa7.54□□□□□ -1.2
PRDM2-202ENST00000311066 KBTBD3Q8NAB2 608 aa7.54□□□□□ -1.2
PRDM2-202ENST00000311066 PKNOX2Q96KN3 472 aa7.54□□□□□ -1.2
PRDM2-202ENST00000311066 GCC2Q8IWJ2 1684 aa7.54□□□□□ -1.2
PRDM2-202ENST00000311066 TRIM75PA6NK02 468 aa7.53□□□□□ -1.2
PRDM2-202ENST00000311066 GPAA1O43292 621 aa7.53□□□□□ -1.2
PRDM2-202ENST00000311066 ZAP70P43403 619 aa7.53□□□□□ -1.2
PRDM2-202ENST00000311066 APOBRQ0VD83 1088 aa7.53□□□□□ -1.2
PRDM2-202ENST00000311066 CHST3Q7LGC8 479 aa7.53□□□□□ -1.2
PRDM2-202ENST00000311066 ERCC4Q92889 916 aaPredicted RBP7.53□□□□□ -1.2
PRDM2-202ENST00000311066 USP40Q9NVE5 1235 aa7.53□□□□□ -1.2
PRDM2-202ENST00000311066 JCADQ9P266 1359 aa7.53□□□□□ -1.2
PRDM2-202ENST00000311066 SYCE3A1L190 88 aa7.53□□□□□ -1.2
PRDM2-202ENST00000311066 PRDM1O75626 825 aa7.53□□□□□ -1.2
PRDM2-202ENST00000311066 MTIF2P46199 727 aaKnown RBP7.53□□□□□ -1.2
PRDM2-202ENST00000311066 TAF4BQ92750 862 aa7.53□□□□□ -1.2
PRDM2-202ENST00000311066 PALLDQ8WX93 1383 aa7.53□□□□□ -1.2
PRDM2-202ENST00000311066 PNMA6EA0A0J9YXQ4 647 aa7.53□□□□□ -1.2
PRDM2-202ENST00000311066 PPEF1O14829 653 aaPredicted RBP7.53□□□□□ -1.2
PRDM2-202ENST00000311066 KRT79Q5XKE5 535 aa7.53□□□□□ -1.2
PRDM2-202ENST00000311066 CCDC174Q6PII3 467 aa7.53□□□□□ -1.2
PRDM2-202ENST00000311066 CLASP1Q7Z460 1538 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms