RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 SLF2Q8IX21 1173 aa14.57□□□□□ -0.08
COL3A1-201ENST00000304636 PLVAPQ9BX97 442 aa14.57□□□□□ -0.08
COL3A1-201ENST00000304636 PRPHP41219 470 aa14.57□□□□□ -0.08
COL3A1-201ENST00000304636 STX17P56962 302 aa14.57□□□□□ -0.08
COL3A1-201ENST00000304636 TSGA10Q9BZW7 698 aa14.57□□□□□ -0.08
COL3A1-201ENST00000304636 C6orf163Q5TEZ5 329 aa14.57□□□□□ -0.08
COL3A1-201ENST00000304636 AFAP1L1Q8TED9 768 aa14.57□□□□□ -0.08
COL3A1-201ENST00000304636 HELLSQ9NRZ9 838 aa14.57□□□□□ -0.08
COL3A1-201ENST00000304636 TTF2Q9UNY4 1162 aaKnown RBP14.57□□□□□ -0.08
COL3A1-201ENST00000304636 CHMP4BP1P59074 171 aa14.56□□□□□ -0.08
COL3A1-201ENST00000304636 FANCCQ00597 558 aa14.56□□□□□ -0.08
COL3A1-201ENST00000304636 CHST3Q7LGC8 479 aa14.56□□□□□ -0.08
COL3A1-201ENST00000304636 CRACR2BQ8N4Y2 399 aaPredicted RBP14.56□□□□□ -0.08
COL3A1-201ENST00000304636 SLC9C2Q5TAH2 1124 aa14.56□□□□□ -0.08
COL3A1-201ENST00000304636 SPTY2D1Q68D10 685 aaPredicted RBP14.56□□□□□ -0.08
COL3A1-201ENST00000304636 CARD6Q9BX69 1037 aa14.56□□□□□ -0.08
COL3A1-201ENST00000304636 SLC4A4Q9Y6R1 1079 aa14.56□□□□□ -0.08
COL3A1-201ENST00000304636 KIF4AO95239 1232 aa14.56□□□□□ -0.08
COL3A1-201ENST00000304636 CDC5LQ99459 802 aaKnown RBP14.56□□□□□ -0.08
COL3A1-201ENST00000304636 NAPGQ99747 312 aaPredicted RBP14.56□□□□□ -0.08
COL3A1-201ENST00000304636 MMRN2Q9H8L6 949 aa14.56□□□□□ -0.08
COL3A1-201ENST00000304636 ASIC1P78348 528 aa14.56□□□□□ -0.08
COL3A1-201ENST00000304636 TRIM14Q14142 442 aa14.56□□□□□ -0.08
COL3A1-201ENST00000304636 CALM1P0DP23 149 aa14.55□□□□□ -0.08
COL3A1-201ENST00000304636 CALM2P0DP24 149 aa14.55□□□□□ -0.08
COL3A1-201ENST00000304636 CALM3P0DP25 149 aa14.55□□□□□ -0.08
COL3A1-201ENST00000304636 KRT2P35908 639 aa14.55□□□□□ -0.08
COL3A1-201ENST00000304636 GNAQP50148 359 aa14.55□□□□□ -0.08
COL3A1-201ENST00000304636 TBC1D5Q92609 795 aa14.55□□□□□ -0.08
COL3A1-201ENST00000304636 CRNKL1Q9BZJ0 848 aaKnown RBP14.55□□□□□ -0.08
COL3A1-201ENST00000304636 RIMS2Q9UQ26 1411 aa14.55□□□□□ -0.08
COL3A1-201ENST00000304636 FLT4P35916 1363 aa14.55□□□□□ -0.08
COL3A1-201ENST00000304636 NPATQ14207 1427 aa14.55□□□□□ -0.08
COL3A1-201ENST00000304636 ZEB2O60315 1214 aa14.55□□□□□ -0.08
COL3A1-201ENST00000304636 A2MP01023 1474 aa14.55□□□□□ -0.08
COL3A1-201ENST00000304636 RTL9Q8NET4 1388 aa14.55□□□□□ -0.08
COL3A1-201ENST00000304636 LDHCP07864 332 aa14.55□□□□□ -0.08
COL3A1-201ENST00000304636 CCDC122Q5T0U0 273 aa14.55□□□□□ -0.08
COL3A1-201ENST00000304636 IQUBQ8NA54 791 aa14.55□□□□□ -0.08
COL3A1-201ENST00000304636 EHMT1Q9H9B1 1298 aa14.55□□□□□ -0.08
COL3A1-201ENST00000304636 MAP3K5Q99683 1374 aa14.55□□□□□ -0.08
COL3A1-201ENST00000304636 A6NNZ2 444 aa14.55□□□□□ -0.08
COL3A1-201ENST00000304636 CTNNA2P26232 953 aa14.55□□□□□ -0.08
COL3A1-201ENST00000304636 TUBB8Q3ZCM7 444 aa14.55□□□□□ -0.08
COL3A1-201ENST00000304636 ANKIB1Q9P2G1 1089 aa14.55□□□□□ -0.08
COL3A1-201ENST00000304636 ARHGAP6O43182 974 aa14.54□□□□□ -0.08
COL3A1-201ENST00000304636 BAG3O95817 575 aa14.54□□□□□ -0.08
COL3A1-201ENST00000304636 CFAP58Q5T655 872 aa14.54□□□□□ -0.08
COL3A1-201ENST00000304636 B4GALNT4Q76KP1 1039 aa14.54□□□□□ -0.08
COL3A1-201ENST00000304636 CEP57Q86XR8 500 aa14.54□□□□□ -0.08
COL3A1-201ENST00000304636 IGSF22Q8N9C0 903 aa14.54□□□□□ -0.08
COL3A1-201ENST00000304636 CCDC114Q96M63 670 aa14.54□□□□□ -0.08
COL3A1-201ENST00000304636 ABCC1P33527 1531 aa14.54□□□□□ -0.08
COL3A1-201ENST00000304636 CALML3P27482 149 aa14.54□□□□□ -0.08
COL3A1-201ENST00000304636 ANO1Q5XXA6 986 aa14.54□□□□□ -0.08
COL3A1-201ENST00000304636 FOXO3O43524 673 aa14.54□□□□□ -0.08
COL3A1-201ENST00000304636 NLRP12P59046 1061 aa14.54□□□□□ -0.08
COL3A1-201ENST00000304636 TFCP2Q12800 502 aa14.54□□□□□ -0.08
COL3A1-201ENST00000304636 VAT1LQ9HCJ6 419 aa14.54□□□□□ -0.08
COL3A1-201ENST00000304636 DENND4BO75064 1496 aaPredicted RBP14.54□□□□□ -0.08
COL3A1-201ENST00000304636 STAMBPO95630 424 aa14.54□□□□□ -0.08
COL3A1-201ENST00000304636 GNAT2P19087 354 aa14.54□□□□□ -0.08
COL3A1-201ENST00000304636 GAS2L3Q86XJ1 694 aa14.54□□□□□ -0.08
COL3A1-201ENST00000304636 TTC14Q96N46 770 aa14.54□□□□□ -0.08
COL3A1-201ENST00000304636 A0A1W2PRG0 241 aa14.53□□□□□ -0.08
COL3A1-201ENST00000304636 WDHD1O75717 1129 aaPredicted RBP14.53□□□□□ -0.08
COL3A1-201ENST00000304636 CPLX4Q7Z7G2 160 aa14.53□□□□□ -0.08
COL3A1-201ENST00000304636 FBF1Q8TES7 1133 aa14.53□□□□□ -0.08
COL3A1-201ENST00000304636 WDR62O43379 1518 aa14.53□□□□□ -0.08
COL3A1-201ENST00000304636 TBCAO75347 108 aaKnown RBP14.53□□□□□ -0.08
COL3A1-201ENST00000304636 TNNC1P63316 161 aa14.53□□□□□ -0.08
COL3A1-201ENST00000304636 CCDC77Q9BR77 488 aa14.53□□□□□ -0.08
COL3A1-201ENST00000304636 SPATA31E1Q6ZUB1 1445 aa14.53□□□□□ -0.08
COL3A1-201ENST00000304636 SSH2Q76I76 1423 aa14.53□□□□□ -0.08
COL3A1-201ENST00000304636 CWF19L2Q2TBE0 894 aaKnown RBP14.53□□□□□ -0.08
COL3A1-201ENST00000304636 FAM173BQ6P4H8 233 aa14.53□□□□□ -0.08
COL3A1-201ENST00000304636 ZRANB1Q9UGI0 708 aa14.53□□□□□ -0.08
COL3A1-201ENST00000304636 GBP6Q6ZN66 633 aa14.53□□□□□ -0.08
COL3A1-201ENST00000304636 G2E3Q7L622 706 aa14.53□□□□□ -0.08
COL3A1-201ENST00000304636 NEK11Q8NG66 645 aa14.53□□□□□ -0.08
COL3A1-201ENST00000304636 CYP7A1P22680 504 aa14.52□□□□□ -0.08
COL3A1-201ENST00000304636 CYP26C1Q6V0L0 522 aa14.52□□□□□ -0.08
COL3A1-201ENST00000304636 ERMNQ8TAM6 284 aa14.52□□□□□ -0.08
COL3A1-201ENST00000304636 IFT81Q8WYA0 676 aa14.52□□□□□ -0.08
COL3A1-201ENST00000304636 RILPL1Q5EBL4 403 aa14.52□□□□□ -0.08
COL3A1-201ENST00000304636 DNAJC21Q5F1R6 531 aaKnown RBP14.52□□□□□ -0.08
COL3A1-201ENST00000304636 NAA16Q6N069 864 aaPredicted RBP14.52□□□□□ -0.08
COL3A1-201ENST00000304636 TM6SF1Q9BZW5 370 aa14.52□□□□□ -0.08
COL3A1-201ENST00000304636 TMOD2Q9NZR1 351 aa14.52□□□□□ -0.08
COL3A1-201ENST00000304636 PAF1Q8N7H5 531 aa14.52□□□□□ -0.09
COL3A1-201ENST00000304636 BABAM1Q9NWV8 329 aa14.52□□□□□ -0.09
COL3A1-201ENST00000304636 KCNH3Q9ULD8 1083 aa14.52□□□□□ -0.09
COL3A1-201ENST00000304636 CDC37L1Q7L3B6 337 aa14.52□□□□□ -0.09
COL3A1-201ENST00000304636 SYCP3Q8IZU3 236 aa14.52□□□□□ -0.09
COL3A1-201ENST00000304636 GPT2Q8TD30 523 aa14.52□□□□□ -0.09
COL3A1-201ENST00000304636 BICC1Q9H694 974 aaKnown RBP14.52□□□□□ -0.09
COL3A1-201ENST00000304636 CCDC6Q16204 474 aa14.51□□□□□ -0.09
COL3A1-201ENST00000304636 POTEDQ86YR6 584 aa14.51□□□□□ -0.09
COL3A1-201ENST00000304636 MLKLQ8NB16 471 aa14.51□□□□□ -0.09
COL3A1-201ENST00000304636 PPM1EQ8WY54 764 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms