RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 AOPEPQ8N6M6 819 aa18.19■□□□□ 0.5
CTDSP1-201ENST00000273062 NBPF7P0C2Y1 421 aaPredicted RBP18.19■□□□□ 0.5
CTDSP1-201ENST00000273062 GRIPAP1Q4V328 841 aa18.19■□□□□ 0.5
CTDSP1-201ENST00000273062 GPR161Q8N6U8 529 aaKnown RBP18.19■□□□□ 0.5
CTDSP1-201ENST00000273062 SOS1Q07889 1333 aaPredicted RBP18.19■□□□□ 0.5
CTDSP1-201ENST00000273062 UBTFL1P0CB47 393 aaPredicted RBP18.19■□□□□ 0.5
CTDSP1-201ENST00000273062 LIG3P49916 1009 aa18.19■□□□□ 0.5
CTDSP1-201ENST00000273062 ATP8B2P98198 1209 aa18.19■□□□□ 0.5
CTDSP1-201ENST00000273062 ME3Q16798 604 aa18.19■□□□□ 0.5
CTDSP1-201ENST00000273062 GSDMDP57764 484 aa18.18■□□□□ 0.5
CTDSP1-201ENST00000273062 ADCK5Q3MIX3 580 aa18.18■□□□□ 0.5
CTDSP1-201ENST00000273062 ZSWIM4Q9H7M6 989 aa18.18■□□□□ 0.5
CTDSP1-201ENST00000273062 HNRNPH1P31943 449 aaKnown RBP18.18■□□□□ 0.5
CTDSP1-201ENST00000273062 RSRC2Q7L4I2 434 aaKnown RBP18.18■□□□□ 0.5
CTDSP1-201ENST00000273062 RPAINQ86UA6 219 aa18.18■□□□□ 0.5
CTDSP1-201ENST00000273062 SLC39A6Q13433 755 aa18.17■□□□□ 0.5
CTDSP1-201ENST00000273062 HSP90AB3PQ58FF7 597 aa18.17■□□□□ 0.5
CTDSP1-201ENST00000273062 CLIC6Q96NY7 704 aa18.17■□□□□ 0.5
CTDSP1-201ENST00000273062 CAMTA1Q9Y6Y1 1673 aa18.17■□□□□ 0.5
CTDSP1-201ENST00000273062 TTC41PQ6P2S7 1318 aa18.17■□□□□ 0.5
CTDSP1-201ENST00000273062 SFPQP23246 707 aaKnown RBP eCLIP18.17■□□□□ 0.5
CTDSP1-201ENST00000273062 MAP9Q49MG5 647 aa18.17■□□□□ 0.5
CTDSP1-201ENST00000273062 LRCH2Q5VUJ6 765 aa18.17■□□□□ 0.5
CTDSP1-201ENST00000273062 WDR24Q96S15 920 aa18.17■□□□□ 0.5
CTDSP1-201ENST00000273062 ADCY9O60503 1353 aa18.16■□□□□ 0.5
CTDSP1-201ENST00000273062 SRGAP3O43295 1099 aa18.16■□□□□ 0.5
CTDSP1-201ENST00000273062 GIGYF1O75420 1035 aaPredicted RBP18.16■□□□□ 0.5
CTDSP1-201ENST00000273062 TPM1P09493 284 aa18.16■□□□□ 0.5
CTDSP1-201ENST00000273062 GOLGA8FQ08AF8 430 aa18.16■□□□□ 0.5
CTDSP1-201ENST00000273062 GOLGA8DPQ0D2H9 430 aa18.16■□□□□ 0.5
CTDSP1-201ENST00000273062 CNNM3Q8NE01 707 aa18.16■□□□□ 0.5
CTDSP1-201ENST00000273062 XPO4Q9C0E2 1151 aaKnown RBP18.16■□□□□ 0.5
CTDSP1-201ENST00000273062 PXDNLA1KZ92 1463 aa18.16■□□□□ 0.5
CTDSP1-201ENST00000273062 CCDC196A0A1B0GTZ2 297 aa18.16■□□□□ 0.5
CTDSP1-201ENST00000273062 PPP2R3AQ06190 1150 aa18.16■□□□□ 0.5
CTDSP1-201ENST00000273062 BEND3Q5T5X7 828 aa18.16■□□□□ 0.5
CTDSP1-201ENST00000273062 VPS53Q5VIR6 699 aa18.16■□□□□ 0.5
CTDSP1-201ENST00000273062 LRRCC1Q9C099 1032 aa18.16■□□□□ 0.5
CTDSP1-201ENST00000273062 SPG7Q9UQ90 795 aa18.16■□□□□ 0.5
CTDSP1-201ENST00000273062 CACNA1FO60840 1977 aa18.15■□□□□ 0.5
CTDSP1-201ENST00000273062 CSB-PGBD3P0DP91 1061 aa18.15■□□□□ 0.5
CTDSP1-201ENST00000273062 STX1AQ16623 288 aa18.15■□□□□ 0.5
CTDSP1-201ENST00000273062 CPLX2Q6PUV4 134 aaKnown RBP18.15■□□□□ 0.5
CTDSP1-201ENST00000273062 IL1RAPL2Q9NP60 686 aa18.15■□□□□ 0.5
CTDSP1-201ENST00000273062 MKRN1Q9UHC7 482 aaKnown RBP18.15■□□□□ 0.5
CTDSP1-201ENST00000273062 MEGF6O75095 1541 aa18.15■□□□□ 0.5
CTDSP1-201ENST00000273062 PTPN21Q16825 1174 aa18.15■□□□□ 0.5
CTDSP1-201ENST00000273062 PPP1R42Q7Z4L9 355 aa18.15■□□□□ 0.5
CTDSP1-201ENST00000273062 CEP120Q8N960 986 aa18.15■□□□□ 0.5
CTDSP1-201ENST00000273062 LSG1Q9H089 658 aaKnown RBP18.15■□□□□ 0.5
CTDSP1-201ENST00000273062 A0A087WUV0 522 aaPredicted RBP18.14■□□□□ 0.49
CTDSP1-201ENST00000273062 HOXB7P09629 217 aa18.14■□□□□ 0.49
CTDSP1-201ENST00000273062 ZRSR1Q15695 479 aaKnown RBP18.14■□□□□ 0.49
CTDSP1-201ENST00000273062 SCAND2PQ9GZW5 306 aaPredicted RBP18.14■□□□□ 0.49
CTDSP1-201ENST00000273062 IFNKQ9P0W0 207 aa18.14■□□□□ 0.49
CTDSP1-201ENST00000273062 ERLIN2O94905 339 aa18.14■□□□□ 0.49
CTDSP1-201ENST00000273062 RAPGEF4Q8WZA2 1011 aa18.14■□□□□ 0.49
CTDSP1-201ENST00000273062 N4BP2Q86UW6 1770 aaPredicted RBP18.13■□□□□ 0.49
CTDSP1-201ENST00000273062 CEBPZQ03701 1054 aaKnown RBP18.13■□□□□ 0.49
CTDSP1-201ENST00000273062 BEND6Q5SZJ8 279 aaPredicted RBP18.13■□□□□ 0.49
CTDSP1-201ENST00000273062 RAI14Q9P0K7 980 aa18.13■□□□□ 0.49
CTDSP1-201ENST00000273062 TUBGCP6Q96RT7 1819 aa18.13■□□□□ 0.49
CTDSP1-201ENST00000273062 EXOC5O00471 708 aa18.13■□□□□ 0.49
CTDSP1-201ENST00000273062 ECM2O94769 699 aaPredicted RBP18.13■□□□□ 0.49
CTDSP1-201ENST00000273062 LARP1Q6PKG0 1096 aaKnown RBP18.13■□□□□ 0.49
CTDSP1-201ENST00000273062 JPH2Q9BR39 696 aaPredicted RBP18.13■□□□□ 0.49
CTDSP1-201ENST00000273062 TPCN1Q9ULQ1 816 aa18.13■□□□□ 0.49
CTDSP1-201ENST00000273062 KDM6AO15550 1401 aaPredicted RBP18.13■□□□□ 0.49
CTDSP1-201ENST00000273062 CAVIN2O95810 425 aa18.12■□□□□ 0.49
CTDSP1-201ENST00000273062 MAP2K1Q02750 393 aaPredicted RBP18.12■□□□□ 0.49
CTDSP1-201ENST00000273062 CADPS2Q86UW7 1296 aa18.12■□□□□ 0.49
CTDSP1-201ENST00000273062 CCDC150Q8NCX0 1101 aa18.12■□□□□ 0.49
CTDSP1-201ENST00000273062 MAP3K2Q9Y2U5 619 aa18.12■□□□□ 0.49
CTDSP1-201ENST00000273062 VWA3AA6NCI4 1184 aa18.12■□□□□ 0.49
CTDSP1-201ENST00000273062 SGSM2O43147 1006 aa18.12■□□□□ 0.49
CTDSP1-201ENST00000273062 BIRC2Q13490 618 aa18.12■□□□□ 0.49
CTDSP1-201ENST00000273062 CWF19L2Q2TBE0 894 aaKnown RBP18.12■□□□□ 0.49
CTDSP1-201ENST00000273062 JAKMIP1Q96N16 626 aaKnown RBP18.12■□□□□ 0.49
CTDSP1-201ENST00000273062 GOLPH3LQ9H4A5 285 aa18.12■□□□□ 0.49
CTDSP1-201ENST00000273062 DBF4Q9UBU7 674 aaPredicted RBP18.12■□□□□ 0.49
CTDSP1-201ENST00000273062 MRFAP1Q9Y605 127 aa18.12■□□□□ 0.49
CTDSP1-201ENST00000273062 HEG1Q9ULI3 1381 aa18.11■□□□□ 0.49
CTDSP1-201ENST00000273062 TNS3Q68CZ2 1445 aa18.11■□□□□ 0.49
CTDSP1-201ENST00000273062 CCDC151A5D8V7 595 aa18.11■□□□□ 0.49
CTDSP1-201ENST00000273062 PPFIA4O75335 1185 aa18.11■□□□□ 0.49
CTDSP1-201ENST00000273062 MAP3K9P80192 1104 aa18.11■□□□□ 0.49
CTDSP1-201ENST00000273062 AIMP1Q12904 312 aaKnown RBP18.11■□□□□ 0.49
CTDSP1-201ENST00000273062 NUTM1Q86Y26 1132 aa18.11■□□□□ 0.49
CTDSP1-201ENST00000273062 PNKPQ96T60 521 aa18.11■□□□□ 0.49
CTDSP1-201ENST00000273062 SLC24A3Q9HC58 644 aa18.11■□□□□ 0.49
CTDSP1-201ENST00000273062 PPP1R12AO14974 1030 aaPredicted RBP18.11■□□□□ 0.49
CTDSP1-201ENST00000273062 SSH3Q8TE77 659 aa18.11■□□□□ 0.49
CTDSP1-201ENST00000273062 RABGGTAQ92696 567 aa18.11■□□□□ 0.49
CTDSP1-201ENST00000273062 DDX11Q96FC9 970 aa18.11■□□□□ 0.49
CTDSP1-201ENST00000273062 UTP14AQ9BVJ6 771 aaKnown RBP18.11■□□□□ 0.49
CTDSP1-201ENST00000273062 FTOQ9C0B1 505 aaKnown RBP eCLIP18.11■□□□□ 0.49
CTDSP1-201ENST00000273062 FAM204AQ9H8W3 233 aa18.11■□□□□ 0.49
CTDSP1-201ENST00000273062 IMPACTQ9P2X3 320 aa18.11■□□□□ 0.49
CTDSP1-201ENST00000273062 DCCP43146 1447 aa18.1■□□□□ 0.49
CTDSP1-201ENST00000273062 PHKG2P15735 406 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms