RNA–Protein interactions for RNA: ENST00000262304.8

PKD1-201, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PKD1, Length 14,138 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-201ENST00000262304 NEDD9Q14511 834 aa11.51□□□□□ -0.57
PKD1-201ENST00000262304 HDXQ7Z353 690 aa11.51□□□□□ -0.57
PKD1-201ENST00000262304 USHBP1Q8N6Y0 703 aa11.51□□□□□ -0.57
PKD1-201ENST00000262304 CCDC77Q9BR77 488 aa11.51□□□□□ -0.57
PKD1-201ENST00000262304 RIPOR2Q9Y4F9 1068 aa11.51□□□□□ -0.57
PKD1-201ENST00000262304 SNX16P57768 344 aa11.51□□□□□ -0.57
PKD1-201ENST00000262304 HEATR3Q7Z4Q2 680 aa11.51□□□□□ -0.57
PKD1-201ENST00000262304 BAZ2BQ9UIF8 2168 aaKnown RBP11.51□□□□□ -0.57
PKD1-201ENST00000262304 FOXD4Q12950 439 aaPredicted RBP11.51□□□□□ -0.57
PKD1-201ENST00000262304 DDX19AQ9NUU7 478 aaKnown RBP11.51□□□□□ -0.57
PKD1-201ENST00000262304 PPFIBP2Q8ND30 876 aa11.51□□□□□ -0.57
PKD1-201ENST00000262304 ABTB1Q969K4 478 aaPredicted RBP11.51□□□□□ -0.57
PKD1-201ENST00000262304 PTCD1O75127 700 aaKnown RBP11.51□□□□□ -0.57
PKD1-201ENST00000262304 NAA16Q6N069 864 aaPredicted RBP11.51□□□□□ -0.57
PKD1-201ENST00000262304 TTC19Q6DKK2 380 aaPredicted RBP11.5□□□□□ -0.57
PKD1-201ENST00000262304 EHBP1Q8NDI1 1231 aa11.5□□□□□ -0.57
PKD1-201ENST00000262304 SPAG5Q96R06 1193 aa11.5□□□□□ -0.57
PKD1-201ENST00000262304 A0A1B0GUA9 196 aa11.5□□□□□ -0.57
PKD1-201ENST00000262304 FOXO3O43524 673 aa11.5□□□□□ -0.57
PKD1-201ENST00000262304 GNL1P36915 607 aaPredicted RBP11.5□□□□□ -0.57
PKD1-201ENST00000262304 UBE2HP62256 183 aa11.5□□□□□ -0.57
PKD1-201ENST00000262304 MICAL1Q8TDZ2 1067 aa11.5□□□□□ -0.57
PKD1-201ENST00000262304 TACC3Q9Y6A5 838 aa11.5□□□□□ -0.57
PKD1-201ENST00000262304 ELF2Q15723 593 aa11.5□□□□□ -0.57
PKD1-201ENST00000262304 DUSP27Q5VZP5 1158 aa11.5□□□□□ -0.57
PKD1-201ENST00000262304 NME9Q86XW9 330 aa11.5□□□□□ -0.57
PKD1-201ENST00000262304 SMIM24O75264 130 aa11.5□□□□□ -0.57
PKD1-201ENST00000262304 TYRO3Q06418 890 aa11.5□□□□□ -0.57
PKD1-201ENST00000262304 TBC1D31Q96DN5 1066 aa11.5□□□□□ -0.57
PKD1-201ENST00000262304 STMN4Q9H169 189 aaPredicted RBP11.5□□□□□ -0.57
PKD1-201ENST00000262304 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.5□□□□□ -0.57
PKD1-201ENST00000262304 UTP14AQ9BVJ6 771 aaKnown RBP11.5□□□□□ -0.57
PKD1-201ENST00000262304 ZBTB21Q9ULJ3 1066 aa11.5□□□□□ -0.57
PKD1-201ENST00000262304 MCUR1Q96AQ8 359 aa11.5□□□□□ -0.57
PKD1-201ENST00000262304 TTC14Q96N46 770 aa11.5□□□□□ -0.57
PKD1-201ENST00000262304 DDX21Q9NR30 783 aaKnown RBP eCLIP11.5□□□□□ -0.57
PKD1-201ENST00000262304 TCP11L1Q9NUJ3 509 aa11.5□□□□□ -0.57
PKD1-201ENST00000262304 RSPH3Q86UC2 560 aa11.5□□□□□ -0.57
PKD1-201ENST00000262304 ZNF652Q9Y2D9 606 aa11.5□□□□□ -0.57
PKD1-201ENST00000262304 SBNO2Q9Y2G9 1366 aa11.49□□□□□ -0.57
PKD1-201ENST00000262304 CCDC102BQ68D86 513 aa11.49□□□□□ -0.57
PKD1-201ENST00000262304 WASLO00401 505 aaPredicted RBP11.49□□□□□ -0.57
PKD1-201ENST00000262304 LRPPRCP42704 1394 aaKnown RBP11.49□□□□□ -0.57
PKD1-201ENST00000262304 EVCP57679 992 aa11.49□□□□□ -0.57
PKD1-201ENST00000262304 AMOTQ4VCS5 1084 aa11.49□□□□□ -0.57
PKD1-201ENST00000262304 CACNA2D3Q8IZS8 1091 aa11.49□□□□□ -0.57
PKD1-201ENST00000262304 CTNND2Q9UQB3 1225 aa11.49□□□□□ -0.57
PKD1-201ENST00000262304 IFIT1P09914 478 aaKnown RBP11.49□□□□□ -0.57
PKD1-201ENST00000262304 TXNDC16Q9P2K2 825 aa11.49□□□□□ -0.57
PKD1-201ENST00000262304 KRT9P35527 623 aa11.49□□□□□ -0.57
PKD1-201ENST00000262304 IDI1Q13907 227 aa11.49□□□□□ -0.57
PKD1-201ENST00000262304 ANLNQ9NQW6 1124 aa11.49□□□□□ -0.57
PKD1-201ENST00000262304 ZNF608Q9ULD9 1512 aaPredicted RBP11.49□□□□□ -0.57
PKD1-201ENST00000262304 MCM5P33992 734 aa11.49□□□□□ -0.57
PKD1-201ENST00000262304 MAK16Q9BXY0 300 aaKnown RBP11.49□□□□□ -0.57
PKD1-201ENST00000262304 DDX12PQ92771 950 aa11.48□□□□□ -0.57
PKD1-201ENST00000262304 GPTP24298 496 aa11.48□□□□□ -0.57
PKD1-201ENST00000262304 CYLC1P35663 651 aaPredicted RBP11.48□□□□□ -0.57
PKD1-201ENST00000262304 SDCCAG8Q86SQ7 713 aaPredicted RBP11.48□□□□□ -0.57
PKD1-201ENST00000262304 TCHPQ9BT92 498 aa11.48□□□□□ -0.57
PKD1-201ENST00000262304 PKD2L1Q9P0L9 805 aa11.48□□□□□ -0.57
PKD1-201ENST00000262304 METAP2P50579 478 aaKnown RBP eCLIP11.48□□□□□ -0.572e-6■■■□□ 17.3
PKD1-201ENST00000262304 CCDC110Q8TBZ0 833 aa11.48□□□□□ -0.57
PKD1-201ENST00000262304 DHX58Q96C10 678 aa11.48□□□□□ -0.57
PKD1-201ENST00000262304 NDUFAB1O14561 156 aa11.48□□□□□ -0.57
PKD1-201ENST00000262304 IFI16Q16666 785 aaKnown RBP11.48□□□□□ -0.57
PKD1-201ENST00000262304 ZNF444Q8N0Y2 327 aaPredicted RBP11.48□□□□□ -0.57
PKD1-201ENST00000262304 HINFPQ9BQA5 517 aa11.48□□□□□ -0.57
PKD1-201ENST00000262304 OGFRQ9NZT2 677 aa11.48□□□□□ -0.57
PKD1-201ENST00000262304 CETN3O15182 167 aa11.48□□□□□ -0.57
PKD1-201ENST00000262304 GRM1Q13255 1194 aa11.48□□□□□ -0.57
PKD1-201ENST00000262304 NGLY1Q96IV0 654 aa11.48□□□□□ -0.57
PKD1-201ENST00000262304 DMRT2Q9Y5R5 561 aa11.48□□□□□ -0.57
PKD1-201ENST00000262304 PTPROQ16827 1216 aa11.48□□□□□ -0.57
PKD1-201ENST00000262304 CHST3Q7LGC8 479 aa11.48□□□□□ -0.57
PKD1-201ENST00000262304 PRPF31Q8WWY3 499 aaKnown RBP11.48□□□□□ -0.57
PKD1-201ENST00000262304 TRIM4Q9C037 500 aa11.48□□□□□ -0.57
PKD1-201ENST00000262304 HARSP12081 509 aaKnown RBP11.48□□□□□ -0.57
PKD1-201ENST00000262304 ZBTB12Q9Y330 459 aaPredicted RBP11.48□□□□□ -0.57
PKD1-201ENST00000262304 MAP2K2P36507 400 aa11.48□□□□□ -0.57
PKD1-201ENST00000262304 DNM1Q05193 864 aaKnown RBP11.48□□□□□ -0.57
PKD1-201ENST00000262304 SPECC1L-ADORA2AF8WAN1 911 aa11.47□□□□□ -0.57
PKD1-201ENST00000262304 KRT5P13647 590 aa11.47□□□□□ -0.57
PKD1-201ENST00000262304 CUL4BQ13620 913 aa11.47□□□□□ -0.57
PKD1-201ENST00000262304 CALM1P0DP23 149 aa11.47□□□□□ -0.57
PKD1-201ENST00000262304 CALM2P0DP24 149 aa11.47□□□□□ -0.57
PKD1-201ENST00000262304 CALM3P0DP25 149 aa11.47□□□□□ -0.57
PKD1-201ENST00000262304 ZNF365Q70YC5 407 aa11.47□□□□□ -0.57
PKD1-201ENST00000262304 B4GALNT4Q76KP1 1039 aa11.47□□□□□ -0.57
PKD1-201ENST00000262304 ZNF287Q9HBT7 754 aa11.47□□□□□ -0.57
PKD1-201ENST00000262304 FAM13AO94988 1023 aa11.47□□□□□ -0.57
PKD1-201ENST00000262304 TSNAXIP1Q2TAA8 658 aa11.47□□□□□ -0.57
PKD1-201ENST00000262304 SP4Q02446 784 aa11.47□□□□□ -0.57
PKD1-201ENST00000262304 DCAF17Q5H9S7 520 aaPredicted RBP11.47□□□□□ -0.57
PKD1-201ENST00000262304 MIER3Q7Z3K6 550 aa11.47□□□□□ -0.57
PKD1-201ENST00000262304 FAM169AQ9Y6X4 670 aa11.47□□□□□ -0.57
PKD1-201ENST00000262304 TAF7Q15545 349 aaPredicted RBP11.47□□□□□ -0.57
PKD1-201ENST00000262304 FNBP4Q8N3X1 1017 aaPredicted RBP11.47□□□□□ -0.57
PKD1-201ENST00000262304 SSH1Q8WYL5 1049 aa11.47□□□□□ -0.57
PKD1-201ENST00000262304 VCX3BQ9H321 246 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms