RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 CAMK4Q16566 473 aa12.63□□□□□ -0.39
CHRNA1-201ENST00000261007 LARP6Q9BRS8 491 aaKnown RBP12.63□□□□□ -0.39
CHRNA1-201ENST00000261007 DSCC1Q9BVC3 393 aa12.63□□□□□ -0.39
CHRNA1-201ENST00000261007 ZNF330Q9Y3S2 320 aaPredicted RBP12.63□□□□□ -0.39
CHRNA1-201ENST00000261007 PHLPP1O60346 1717 aa12.62□□□□□ -0.39
CHRNA1-201ENST00000261007 SLC20A2Q08357 652 aa12.62□□□□□ -0.39
CHRNA1-201ENST00000261007 KMT5BQ4FZB7 885 aa12.62□□□□□ -0.39
CHRNA1-201ENST00000261007 ZNF589Q86UQ0 364 aaPredicted RBP12.62□□□□□ -0.39
CHRNA1-201ENST00000261007 DOT1LQ8TEK3 1739 aa12.62□□□□□ -0.39
CHRNA1-201ENST00000261007 CHMP4CQ96CF2 233 aa12.62□□□□□ -0.39
CHRNA1-201ENST00000261007 SPATA32Q96LK8 384 aa12.62□□□□□ -0.39
CHRNA1-201ENST00000261007 TIGD1Q96MW7 591 aa12.62□□□□□ -0.39
CHRNA1-201ENST00000261007 CALCOCO1Q9P1Z2 691 aa12.62□□□□□ -0.39
CHRNA1-201ENST00000261007 NWD2Q9ULI1 1742 aa12.62□□□□□ -0.39
CHRNA1-201ENST00000261007 LTBP4Q8N2S1 1624 aa12.62□□□□□ -0.39
CHRNA1-201ENST00000261007 HSP90B1P14625 803 aaKnown RBP12.61□□□□□ -0.39
CHRNA1-201ENST00000261007 LRRC24Q50LG9 513 aa12.61□□□□□ -0.39
CHRNA1-201ENST00000261007 NLRP10Q86W26 655 aa12.61□□□□□ -0.39
CHRNA1-201ENST00000261007 CKAP2LQ8IYA6 745 aa12.61□□□□□ -0.39
CHRNA1-201ENST00000261007 LEO1Q8WVC0 666 aaPredicted RBP12.61□□□□□ -0.39
CHRNA1-201ENST00000261007 SPATA31A1Q5TZJ5 1347 aa12.61□□□□□ -0.39
CHRNA1-201ENST00000261007 MYH3P11055 1940 aa12.61□□□□□ -0.39
CHRNA1-201ENST00000261007 CTAGE5O15320 804 aa12.61□□□□□ -0.39
CHRNA1-201ENST00000261007 CPA1P15085 419 aa12.61□□□□□ -0.39
CHRNA1-201ENST00000261007 NAA30Q147X3 362 aaPredicted RBP12.61□□□□□ -0.39
CHRNA1-201ENST00000261007 CCDC144BQ3MJ40 725 aa12.61□□□□□ -0.39
CHRNA1-201ENST00000261007 ZMYM1Q5SVZ6 1142 aa12.61□□□□□ -0.39
CHRNA1-201ENST00000261007 DDX46Q7L014 1031 aaKnown RBP12.61□□□□□ -0.39
CHRNA1-201ENST00000261007 CCDC144CPQ8IYA2 1237 aa12.61□□□□□ -0.39
CHRNA1-201ENST00000261007 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.61□□□□□ -0.39
CHRNA1-201ENST00000261007 ANKRD18BA2A2Z9 1011 aa12.6□□□□□ -0.39
CHRNA1-201ENST00000261007 GOLGA6L19H0YKK7 550 aa12.6□□□□□ -0.39
CHRNA1-201ENST00000261007 GOLIM4O00461 696 aa12.6□□□□□ -0.39
CHRNA1-201ENST00000261007 RNF113AO15541 343 aaKnown RBP12.6□□□□□ -0.39
CHRNA1-201ENST00000261007 SLU7O95391 586 aaKnown RBP12.6□□□□□ -0.39
CHRNA1-201ENST00000261007 TUBB4AP04350 444 aa12.6□□□□□ -0.39
CHRNA1-201ENST00000261007 TIMM10P62072 90 aa12.6□□□□□ -0.39
CHRNA1-201ENST00000261007 IQCB1Q15051 598 aa12.6□□□□□ -0.39
CHRNA1-201ENST00000261007 DDB1Q16531 1140 aa12.6□□□□□ -0.39
CHRNA1-201ENST00000261007 TTC39AQ5SRH9 613 aa12.6□□□□□ -0.39
CHRNA1-201ENST00000261007 GORABQ5T7V8 394 aa12.6□□□□□ -0.39
CHRNA1-201ENST00000261007 CDC37L1Q7L3B6 337 aa12.6□□□□□ -0.39
CHRNA1-201ENST00000261007 EDC3Q96F86 508 aaKnown RBP12.6□□□□□ -0.39
CHRNA1-201ENST00000261007 NEK1Q96PY6 1258 aa12.6□□□□□ -0.39
CHRNA1-201ENST00000261007 ZNF215Q9UL58 517 aaPredicted RBP12.6□□□□□ -0.39
CHRNA1-201ENST00000261007 TPCN1Q9ULQ1 816 aa12.6□□□□□ -0.39
CHRNA1-201ENST00000261007 PDE8AO60658 829 aa12.6□□□□□ -0.39
CHRNA1-201ENST00000261007 CTSWP56202 376 aa12.6□□□□□ -0.39
CHRNA1-201ENST00000261007 BMS1Q14692 1282 aaKnown RBP12.6□□□□□ -0.39
CHRNA1-201ENST00000261007 BARGINQ6ZT62 677 aa12.6□□□□□ -0.39
CHRNA1-201ENST00000261007 FAM89AQ96GI7 184 aa12.6□□□□□ -0.39
CHRNA1-201ENST00000261007 ZNF594Q96JF6 807 aaPredicted RBP12.6□□□□□ -0.39
CHRNA1-201ENST00000261007 ZNF512BQ96KM6 892 aaPredicted RBP12.6□□□□□ -0.39
CHRNA1-201ENST00000261007 NUP98P52948 1817 aa12.59□□□□□ -0.39
CHRNA1-201ENST00000261007 RREB1Q92766 1687 aa12.59□□□□□ -0.39
CHRNA1-201ENST00000261007 DZIP3Q86Y13 1208 aaKnown RBP12.59□□□□□ -0.39
CHRNA1-201ENST00000261007 DNAJC25Q9H1X3 360 aa12.59□□□□□ -0.39
CHRNA1-201ENST00000261007 ZBTB1Q9Y2K1 713 aa12.59□□□□□ -0.39
CHRNA1-201ENST00000261007 SKILP12757 684 aa12.58□□□□□ -0.4
CHRNA1-201ENST00000261007 DHX8Q14562 1220 aaKnown RBP12.58□□□□□ -0.4
CHRNA1-201ENST00000261007 FBXO38Q6PIJ6 1188 aa12.58□□□□□ -0.4
CHRNA1-201ENST00000261007 CCAR2Q8N163 923 aaKnown RBP12.58□□□□□ -0.4
CHRNA1-201ENST00000261007 NECAB1Q8N987 351 aa12.58□□□□□ -0.4
CHRNA1-201ENST00000261007 ZNF592Q92610 1267 aa12.58□□□□□ -0.4
CHRNA1-201ENST00000261007 SMARCC1Q92922 1105 aaPredicted RBP12.58□□□□□ -0.4
CHRNA1-201ENST00000261007 SYTL4Q96C24 671 aaPredicted RBP12.58□□□□□ -0.4
CHRNA1-201ENST00000261007 XAGE2Q96GT9 111 aa12.58□□□□□ -0.4
CHRNA1-201ENST00000261007 IRS4O14654 1257 aaPredicted RBP12.58□□□□□ -0.4
CHRNA1-201ENST00000261007 NR1I2O75469 434 aa12.58□□□□□ -0.4
CHRNA1-201ENST00000261007 GSDMDP57764 484 aa12.58□□□□□ -0.4
CHRNA1-201ENST00000261007 HLFQ16534 295 aa12.58□□□□□ -0.4
CHRNA1-201ENST00000261007 PARP10Q53GL7 1025 aa12.58□□□□□ -0.4
CHRNA1-201ENST00000261007 ZNF34Q8IZ26 560 aa12.58□□□□□ -0.4
CHRNA1-201ENST00000261007 TTLL11Q8NHH1 800 aa12.58□□□□□ -0.4
CHRNA1-201ENST00000261007 SLC4A9Q96Q91 983 aa12.58□□□□□ -0.4
CHRNA1-201ENST00000261007 PUS3Q9BZE2 481 aaKnown RBP12.58□□□□□ -0.4
CHRNA1-201ENST00000261007 TSPYL1Q9H0U9 437 aa12.58□□□□□ -0.4
CHRNA1-201ENST00000261007 TRMT112Q9UI30 125 aaKnown RBP12.58□□□□□ -0.4
CHRNA1-201ENST00000261007 TULP2O00295 520 aa12.57□□□□□ -0.4
CHRNA1-201ENST00000261007 ITGA6P23229 1130 aa12.57□□□□□ -0.4
CHRNA1-201ENST00000261007 KCNJ6P48051 423 aa12.57□□□□□ -0.4
CHRNA1-201ENST00000261007 IRX5P78411 483 aaPredicted RBP12.57□□□□□ -0.4
CHRNA1-201ENST00000261007 CCZ1BP86790 482 aa12.57□□□□□ -0.4
CHRNA1-201ENST00000261007 CCZ1P86791 482 aaPredicted RBP12.57□□□□□ -0.4
CHRNA1-201ENST00000261007 TTF1Q15361 905 aaPredicted RBP12.57□□□□□ -0.4
CHRNA1-201ENST00000261007 STX1AQ16623 288 aa12.57□□□□□ -0.4
CHRNA1-201ENST00000261007 METTL24Q5JXM2 366 aa12.57□□□□□ -0.4
CHRNA1-201ENST00000261007 LDHAL6AQ6ZMR3 332 aa12.57□□□□□ -0.4
CHRNA1-201ENST00000261007 FERMT3Q86UX7 667 aa12.57□□□□□ -0.4
CHRNA1-201ENST00000261007 BICD2Q8TD16 824 aa12.57□□□□□ -0.4
CHRNA1-201ENST00000261007 PGBD1Q96JS3 809 aa12.57□□□□□ -0.4
CHRNA1-201ENST00000261007 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.57□□□□□ -0.4
CHRNA1-201ENST00000261007 ZSCAN16Q9H4T2 348 aaPredicted RBP12.57□□□□□ -0.4
CHRNA1-201ENST00000261007 L2HGDHQ9H9P8 463 aa12.57□□□□□ -0.4
CHRNA1-201ENST00000261007 CCDC87Q9NVE4 849 aa12.57□□□□□ -0.4
CHRNA1-201ENST00000261007 CFAP45Q9UL16 551 aa12.57□□□□□ -0.4
CHRNA1-201ENST00000261007 RIPOR2Q9Y4F9 1068 aa12.57□□□□□ -0.4
CHRNA1-201ENST00000261007 SPATA31A5Q5VU36 1347 aa12.57□□□□□ -0.4
CHRNA1-201ENST00000261007 SPATA31A7Q8IWB4 1347 aa12.57□□□□□ -0.4
CHRNA1-201ENST00000261007 LRP5O75197 1615 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms