RNA–Protein interactions for RNA: ENSMUST00000219577.1

Herc4-208, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Herc4, Length 3,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-208ENSMUST00000219577 Bin2D3Z6Q9 489 aa14.01□□□□□ -0.17
Herc4-208ENSMUST00000219577 Tpm3P21107 285 aaKnown RBP14.01□□□□□ -0.17
Herc4-208ENSMUST00000219577 IcoslgQ9JHJ8 322 aa14.01□□□□□ -0.17
Herc4-208ENSMUST00000219577 Cyp26a1O55127 497 aa14□□□□□ -0.17
Herc4-208ENSMUST00000219577 Cep135Q6P5D4 1140 aa14□□□□□ -0.17
Herc4-208ENSMUST00000219577 Zbtb7aO88939 569 aaKnown RBP14□□□□□ -0.17
Herc4-208ENSMUST00000219577 Zkscan4Q5SZT6 480 aa14□□□□□ -0.17
Herc4-208ENSMUST00000219577 Atp12aQ9Z1W8 1035 aa14□□□□□ -0.17
Herc4-208ENSMUST00000219577 Pramel3A2AHA7 463 aa14□□□□□ -0.17
Herc4-208ENSMUST00000219577 Gm7903A2AWL1 463 aa14□□□□□ -0.17
Herc4-208ENSMUST00000219577 AV320801A2AWL3 467 aa14□□□□□ -0.17
Herc4-208ENSMUST00000219577 Gm15023L7MUB4 467 aa14□□□□□ -0.17
Herc4-208ENSMUST00000219577 Dcaf5Q80T85 946 aa14□□□□□ -0.17
Herc4-208ENSMUST00000219577 Ufl1Q8CCJ3 793 aaKnown RBP14□□□□□ -0.17
Herc4-208ENSMUST00000219577 Krt84Q99M73 603 aa14□□□□□ -0.17
Herc4-208ENSMUST00000219577 Appbp2Q9DAX9 585 aa14□□□□□ -0.17
Herc4-208ENSMUST00000219577 Ifit1bl2Q3U687 466 aa13.99□□□□□ -0.17
Herc4-208ENSMUST00000219577 Ankrd40Q5SUE8 363 aa13.99□□□□□ -0.17
Herc4-208ENSMUST00000219577 Zfp202Q8C879 641 aa13.99□□□□□ -0.17
Herc4-208ENSMUST00000219577 Atad2Q8CDM1 1040 aa13.99□□□□□ -0.17
Herc4-208ENSMUST00000219577 AK157302I3ITR1 129 aa13.99□□□□□ -0.17
Herc4-208ENSMUST00000219577 Ift122Q6NWV3 1182 aa13.99□□□□□ -0.17
Herc4-208ENSMUST00000219577 Fam160b2Q80YR2 744 aa13.99□□□□□ -0.17
Herc4-208ENSMUST00000219577 Sptlc3Q8BG54 563 aa13.99□□□□□ -0.17
Herc4-208ENSMUST00000219577 Tpcn2Q8BWC0 731 aa13.99□□□□□ -0.17
Herc4-208ENSMUST00000219577 Q8BZJ8 459 aa13.99□□□□□ -0.17
Herc4-208ENSMUST00000219577 Trim52Q8CDV4 233 aa13.99□□□□□ -0.17
Herc4-208ENSMUST00000219577 Frat2Q8K025 231 aa13.99□□□□□ -0.17
Herc4-208ENSMUST00000219577 Tmem143Q8VD26 458 aa13.99□□□□□ -0.17
Herc4-208ENSMUST00000219577 Isca1Q9D924 129 aa13.99□□□□□ -0.17
Herc4-208ENSMUST00000219577 Slc4a4O88343 1079 aa13.99□□□□□ -0.17
Herc4-208ENSMUST00000219577 Ell2Q3UKU1 639 aa13.99□□□□□ -0.17
Herc4-208ENSMUST00000219577 Clca2Q8BG22 942 aa13.99□□□□□ -0.17
Herc4-208ENSMUST00000219577 Xpo4Q9ESJ0 1151 aa13.99□□□□□ -0.17
Herc4-208ENSMUST00000219577 N4bp2F8VQG7 1678 aaKnown RBP13.99□□□□□ -0.17
Herc4-208ENSMUST00000219577 Clec11aO88200 328 aa13.98□□□□□ -0.17
Herc4-208ENSMUST00000219577 Clic6Q8BHB9 596 aa13.98□□□□□ -0.17
Herc4-208ENSMUST00000219577 Ncaph2Q8BSP2 607 aa13.98□□□□□ -0.17
Herc4-208ENSMUST00000219577 Rgs9O54828 675 aa13.98□□□□□ -0.17
Herc4-208ENSMUST00000219577 Hmx1O70218 332 aa13.98□□□□□ -0.17
Herc4-208ENSMUST00000219577 Tpm3-rs7D3Z2H9 248 aa13.98□□□□□ -0.17
Herc4-208ENSMUST00000219577 TrdnE9Q9K5 693 aa13.98□□□□□ -0.17
Herc4-208ENSMUST00000219577 Zfp251Q6PCX8 632 aa13.98□□□□□ -0.17
Herc4-208ENSMUST00000219577 Iqca1Q9CUL5 857 aa13.98□□□□□ -0.17
Herc4-208ENSMUST00000219577 Tfcp2Q9ERA0 502 aa13.98□□□□□ -0.17
Herc4-208ENSMUST00000219577 Myo1bP46735 1107 aa13.97□□□□□ -0.17
Herc4-208ENSMUST00000219577 Exoc5Q3TPX4 708 aa13.97□□□□□ -0.17
Herc4-208ENSMUST00000219577 Jmjd4Q8BFT6 427 aa13.97□□□□□ -0.17
Herc4-208ENSMUST00000219577 Suclg2Q9Z2I8 433 aa13.97□□□□□ -0.17
Herc4-208ENSMUST00000219577 Myo5bP21271 1818 aa13.97□□□□□ -0.17
Herc4-208ENSMUST00000219577 Cyp3a57D3YYZ0 503 aa13.97□□□□□ -0.17
Herc4-208ENSMUST00000219577 Gm21969J3QJZ1 289 aa13.97□□□□□ -0.17
Herc4-208ENSMUST00000219577 Cyp19a1P28649 503 aa13.97□□□□□ -0.17
Herc4-208ENSMUST00000219577 Abtb2Q7TQI7 1024 aa13.97□□□□□ -0.17
Herc4-208ENSMUST00000219577 Rps6ka5Q8C050 863 aa13.97□□□□□ -0.17
Herc4-208ENSMUST00000219577 Wdr64Q9D565 1086 aa13.97□□□□□ -0.17
Herc4-208ENSMUST00000219577 NefhP19246 1090 aa13.97□□□□□ -0.17
Herc4-208ENSMUST00000219577 Pfkfb1P70266 471 aa13.97□□□□□ -0.17
Herc4-208ENSMUST00000219577 Znf568E9PYI1 671 aa13.96□□□□□ -0.17
Herc4-208ENSMUST00000219577 Dapk3O54784 448 aa13.96□□□□□ -0.17
Herc4-208ENSMUST00000219577 XpcP51612 930 aa13.96□□□□□ -0.17
Herc4-208ENSMUST00000219577 IntuQ059U7 942 aa13.96□□□□□ -0.17
Herc4-208ENSMUST00000219577 Edrf1Q6GQV7 1239 aa13.96□□□□□ -0.17
Herc4-208ENSMUST00000219577 Eaf2Q91ZD6 262 aa13.96□□□□□ -0.17
Herc4-208ENSMUST00000219577 Hdac6Q9Z2V5 1149 aa13.96□□□□□ -0.17
Herc4-208ENSMUST00000219577 Pcdhb9E9Q5G2 828 aa13.96□□□□□ -0.17
Herc4-208ENSMUST00000219577 Samsn1P57725 372 aa13.96□□□□□ -0.17
Herc4-208ENSMUST00000219577 Ap5z1Q3U829 807 aa13.96□□□□□ -0.17
Herc4-208ENSMUST00000219577 Pex1Q5BL07 1284 aa13.96□□□□□ -0.17
Herc4-208ENSMUST00000219577 Bsdc1Q80Y55 427 aa13.96□□□□□ -0.17
Herc4-208ENSMUST00000219577 Ctdspl2Q8BG15 465 aa13.96□□□□□ -0.17
Herc4-208ENSMUST00000219577 Ttc12Q8BW49 704 aa13.96□□□□□ -0.17
Herc4-208ENSMUST00000219577 Ces1dQ8VCT4 565 aa13.96□□□□□ -0.17
Herc4-208ENSMUST00000219577 Pold4Q9CWP8 107 aa13.96□□□□□ -0.17
Herc4-208ENSMUST00000219577 Arfgef2A2A5R2 1792 aa13.96□□□□□ -0.17
Herc4-208ENSMUST00000219577 Slit2Q9R1B9 1521 aa13.96□□□□□ -0.17
Herc4-208ENSMUST00000219577 Ccz1Q8C1Y8 480 aa13.96□□□□□ -0.17
Herc4-208ENSMUST00000219577 Nup133Q8R0G9 1155 aa13.96□□□□□ -0.17
Herc4-208ENSMUST00000219577 Magi2Q9WVQ1 1275 aa13.96□□□□□ -0.17
Herc4-208ENSMUST00000219577 Diaph1O08808 1255 aa13.96□□□□□ -0.18
Herc4-208ENSMUST00000219577 Sf3b2Q3UJB0 878 aaKnown RBP13.96□□□□□ -0.18
Herc4-208ENSMUST00000219577 TfrcQ62351 763 aaKnown RBP13.96□□□□□ -0.18
Herc4-208ENSMUST00000219577 Tbc1d31Q6NXY1 996 aa13.96□□□□□ -0.18
Herc4-208ENSMUST00000219577 Eno4Q8C042 619 aa13.96□□□□□ -0.18
Herc4-208ENSMUST00000219577 Rbm43Q99J64 343 aa13.96□□□□□ -0.18
Herc4-208ENSMUST00000219577 Large1Q9Z1M7 756 aa13.96□□□□□ -0.18
Herc4-208ENSMUST00000219577 Exosc10P56960 887 aaKnown RBP13.95□□□□□ -0.18
Herc4-208ENSMUST00000219577 Lrrc8aQ80WG5 810 aa13.95□□□□□ -0.18
Herc4-208ENSMUST00000219577 Map10Q8BJS7 891 aa13.95□□□□□ -0.18
Herc4-208ENSMUST00000219577 Bmp2kQ91Z96 1138 aa13.95□□□□□ -0.18
Herc4-208ENSMUST00000219577 Krt82Q99M74 516 aa13.95□□□□□ -0.18
Herc4-208ENSMUST00000219577 Ccdc39Q9D5Y1 937 aa13.95□□□□□ -0.18
Herc4-208ENSMUST00000219577 Chd2E9PZM4 1827 aaKnown RBP13.95□□□□□ -0.18
Herc4-208ENSMUST00000219577 Lamb3Q61087 1168 aa13.95□□□□□ -0.18
Herc4-208ENSMUST00000219577 Ttc27Q8CD92 847 aa13.95□□□□□ -0.18
Herc4-208ENSMUST00000219577 Plekho1Q9JIY0 408 aa13.95□□□□□ -0.18
Herc4-208ENSMUST00000219577 Sos2Q02384 1333 aa13.95□□□□□ -0.18
Herc4-208ENSMUST00000219577 Cyp2d9P11714 504 aa13.95□□□□□ -0.18
Herc4-208ENSMUST00000219577 Zbtb38Q3LR78 1197 aa13.95□□□□□ -0.18
Herc4-208ENSMUST00000219577 Llgl2Q3TJ91 1027 aa13.95□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 48.2 ms