RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

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Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Tmem132aQ922P8 1018 aa11.2□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Nwd2Q6P5U7 1742 aa11.2□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Pcdhb9E9Q5G2 828 aa11.2□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Eef2kO08796 724 aa11.2□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Slc4a4O88343 1079 aa11.2□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Olfm5Q8BU90 496 aa11.2□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 SnrkQ8VDU5 748 aa11.2□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Gja10Q9WUS4 505 aa11.2□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 MsnP26041 577 aaKnown RBP11.2□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Ehmt1Q5DW34 1296 aa11.2□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Rnf214Q8BFU3 668 aaKnown RBP11.2□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Znf771Q8BJ90 317 aa11.2□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Hmgb2P30681 210 aaKnown RBP11.19□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Rps8P62242 208 aaKnown RBP11.19□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 SfswapQ3USH5 945 aaKnown RBP11.19□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Nme8Q715T0 586 aa11.19□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Ano1Q8BHY3 960 aa11.19□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Erich6bQ9D4S6 220 aa11.19□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Popdc2Q9ES82 367 aa11.19□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 PdcQ9QW08 244 aa11.19□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Mroh6V9GX81 722 aa11.19□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Npy5rO70342 466 aa11.19□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Me3Q8BMF3 604 aa11.19□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Lrit1Q8K099 624 aa11.19□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Pcdhb22Q91XZ8 794 aa11.19□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Dydc2Q9D3X8 139 aa11.19□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Lrp6O88572 1613 aa11.19□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Rtkn2Q14B46 604 aa11.19□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Leo1Q5XJE5 667 aa11.19□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Sil1Q9EPK6 465 aa11.19□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Zfp804bA0A0G2JGH6 1343 aa11.19□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Gnat2P50149 354 aa11.19□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 FliiQ9JJ28 1271 aa11.19□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Sh3bgrQ9WUZ7 214 aa11.19□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Zbtb22Q9Z0G7 638 aa11.19□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Sh3tc1G3X9F6 1346 aa11.18□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Tnni2P13412 182 aa11.18□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Skap1Q3UUV5 355 aa11.18□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Sp8Q8BMJ8 486 aa11.18□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Srgap1Q91Z69 1062 aa11.18□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Cdc45Q9Z1X9 566 aa11.18□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Cplx1P63040 134 aa11.18□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Erich4Q3UNU4 136 aa11.18□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 4931408C20RikE9PWP9 1381 aa11.18□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 PappaQ8R4K8 1624 aa11.17□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Ank1Q02357 1862 aa11.17□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Dnajc2P54103 621 aaKnown RBP11.17□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Plekhf1Q3TB82 279 aa11.17□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Esyt1Q3U7R1 1092 aaKnown RBP11.17□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Cdkl5Q3UTQ8 938 aa11.17□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Zfp113Q8C689 439 aa11.17□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 NsmfQ99NF2 532 aa11.17□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Letm1Q9Z2I0 738 aa11.17□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 TrdnE9Q9K5 693 aa11.17□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Evc2Q8K1G2 1220 aa11.17□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 A0A1W2P7S8 802 aa11.17□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 GalcP54818 684 aa11.17□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 LyarQ08288 388 aaKnown RBP11.17□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Znf496Q5SXI5 585 aa11.17□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Il17raQ60943 864 aa11.17□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Arid3aQ62431 601 aa11.17□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Cdc5lQ6A068 802 aaKnown RBP11.17□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Atp8b3Q6UQ17 1335 aa11.17□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Rnf41Q8BH75 317 aa11.17□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Amhr2Q8K592 568 aa11.17□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Carmil3Q3UFQ8 1375 aa11.17□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Sik3Q6P4S6 1311 aa11.17□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Dennd3A2RT67 1274 aa11.17□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Spg7Q3ULF4 781 aa11.17□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Sf3b3Q921M3 1217 aaKnown RBP11.17□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Adarb2Q9JI20 745 aa11.17□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Fbxl16A2RT62 479 aa11.16□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Il4rP16382 810 aa11.16□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Cnnm2Q3TWN3 875 aa11.16□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 ErmnQ5EBJ4 281 aa11.16□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Cyp24a1Q64441 514 aa11.16□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 U2af1l4Q8BGJ9 220 aa11.16□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Slc39a11Q8BWY7 342 aa11.16□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Tktl2Q9D4D4 627 aa11.16□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Metap2O08663 478 aaKnown RBP11.16□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Il15P48346 162 aa11.16□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Fam170aQ66LM6 333 aa11.16□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Edrf1Q6GQV7 1239 aa11.16□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Rbm43Q99J64 343 aa11.16□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Osbpl5Q9ER64 874 aa11.16□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Pet2A2AHY8 747 aa11.16□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 4930523C07RikE9Q2T4 99 aa11.16□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Mapkapk5O54992 473 aa11.16□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Prdm1Q60636 856 aa11.16□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 DymQ8CHY3 669 aa11.16□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 McamQ8R2Y2 648 aaKnown RBP11.16□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 St5Q924W7 1134 aa11.16□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 RarsQ9D0I9 660 aaKnown RBP11.16□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Kif3aP28741 701 aa11.15□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Exosc10P56960 887 aaKnown RBP11.15□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Ttc12Q8BW49 704 aa11.15□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Utp3Q9JI13 469 aaKnown RBP11.15□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Dpf1Q9QX66 387 aa11.15□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Zbtb7aO88939 569 aaKnown RBP11.15□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Pald1P70261 859 aa11.15□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms