RNA–Protein interactions for RNA: ENSMUST00000132214.7

Ccdc38-203, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc38, Length 2,222 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-203ENSMUST00000132214 Atp2b3Q0VF55 1220 aa7.75□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Arglu1Q3UL36 271 aaKnown RBP7.75□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Tmed1Q3V009 227 aa7.75□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Cep131Q62036 1060 aa7.75□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Exoc8Q6PGF7 716 aa7.75□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Map4k5Q8BPM2 847 aaKnown RBP7.75□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Prkrip1Q9CWV6 186 aaKnown RBP7.75□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Bcs1lQ9CZP5 418 aa7.75□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Rnf225Q9D7D1 332 aa7.75□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Q9D9H8 365 aa7.75□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 AatfQ9JKX4 526 aaKnown RBP7.75□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Abca8aQ8K442 1620 aa7.75□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Anapc15-psA0A140T8L6 141 aa7.75□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 PdgfaP20033 211 aa7.75□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Cyp17a1P27786 507 aa7.75□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Tlr7P58681 1050 aa7.75□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Mybpc2Q5XKE0 1136 aa7.75□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Tspan18Q80WR1 248 aa7.75□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 AmotQ8VHG2 1126 aa7.75□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Polr3dQ91WD1 398 aa7.75□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Stk26Q99JT2 416 aa7.75□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 HnrnpmQ9D0E1 729 aaKnown RBP7.75□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Tmem52Q9D702 196 aa7.75□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 C1qtnf2Q9D8U4 294 aa7.75□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 DccP70211 1447 aa7.75□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Cep152A2AUM9 1736 aaKnown RBP7.75□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Impdh2P24547 514 aa7.74□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 CblbQ3TTA7 982 aa7.74□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Gtdc1Q8BW56 445 aa7.74□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Kdm4aQ8BW72 1064 aa7.74□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Phka2Q8BWJ3 1235 aa7.74□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Setdb2Q8C267 713 aa7.74□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Itgbl1Q8VDV0 494 aa7.74□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Tmco4Q91WU4 631 aa7.74□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Sugt1Q9CX34 336 aa7.74□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Antxr1Q9CZ52 562 aa7.74□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Fam174aQ9D3L0 190 aa7.74□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Ppp1r12aQ9DBR7 1029 aaKnown RBP7.74□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Ipo7Q9EPL8 1038 aaKnown RBP7.74□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Psma6Q9QUM9 246 aa7.74□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Srcin1Q9QWI6 1250 aa7.74□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Bfsp1A2AMT1 669 aa7.74□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Gm6588E9Q3K0 461 aa7.74□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Zc3h12bG3X9I7 835 aa7.74□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Gm2056J3QQ02 144 aa7.74□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Sox18P43680 377 aa7.74□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Irf3P70671 419 aa7.74□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Tmc6Q7TN60 810 aa7.74□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Sytl5Q80T23 753 aa7.74□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Ccdc73Q8CDM4 1066 aa7.74□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 4931400O07RikQ9D4M5 137 aa7.74□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Col4a3bpQ9EQG9 624 aa7.74□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Col14a1Q80X19 1797 aa7.73□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Lrriq3Q14DL3 633 aa7.73□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Ppp1r9bQ6R891 817 aaKnown RBP7.73□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Shq1Q7TMX5 569 aa7.73□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Kirrel2Q7TSU7 700 aa7.73□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Pank3Q8R2W9 370 aa7.73□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Zkscan3Q91VW9 553 aa7.73□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Pcdhb2Q91Y00 799 aa7.73□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Pcdhb13Q91Y06 796 aa7.73□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Gm21319F6YNI8 144 aa7.72□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Gm5624F6ZZG8 207 aa7.72□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Srpk2O54781 681 aaKnown RBP7.72□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Ess2O70279 479 aa7.72□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Epha4Q03137 986 aa7.72□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Paf1Q8K2T8 535 aa7.72□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Glipr1l2Q9CQ35 332 aa7.72□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Cdk5rap2Q8K389 1822 aa7.72□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 PrxO55103 1391 aa7.72□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Dnai2A2AC93 623 aa7.72□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 MccE9PWI3 1003 aa7.72□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Msl3l2G3X992 371 aa7.72□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Irx2P81066 474 aa7.72□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 RubcnlQ3TD16 648 aa7.72□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Klra3Q64329 266 aa7.72□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Fan1Q69ZT1 1020 aa7.72□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Fbxl21Q8BFZ4 434 aa7.72□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Add1Q9QYC0 735 aaKnown RBP7.72□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Rgs17Q9QZB0 210 aa7.72□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 C3P01027 1663 aa7.72□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 AatkQ80YE4 1365 aa7.72□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Paxbp1P58501 919 aa7.71□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Nol10Q5RJG1 687 aaKnown RBP7.71□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Amhr2Q8K592 568 aa7.71□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Capn10Q9ESK3 666 aa7.71□□□□□ -1.17
Ccdc38-203ENSMUST00000132214 Itsn2Q9Z0R6 1659 aa7.71□□□□□ -1.18
Ccdc38-203ENSMUST00000132214 Lonrf2B2RT44 518 aa7.71□□□□□ -1.18
Ccdc38-203ENSMUST00000132214 Ccdc85cE9Q6B2 420 aa7.71□□□□□ -1.18
Ccdc38-203ENSMUST00000132214 Phactr1Q2M3X8 580 aa7.71□□□□□ -1.18
Ccdc38-203ENSMUST00000132214 Gzf1Q4VBD9 706 aa7.71□□□□□ -1.18
Ccdc38-203ENSMUST00000132214 GorabQ8BRM2 368 aa7.71□□□□□ -1.18
Ccdc38-203ENSMUST00000132214 Rassf4Q8CB96 322 aa7.71□□□□□ -1.18
Ccdc38-203ENSMUST00000132214 Q8CC96 669 aa7.71□□□□□ -1.18
Ccdc38-203ENSMUST00000132214 Smc2Q8CG48 1191 aaKnown RBP7.71□□□□□ -1.18
Ccdc38-203ENSMUST00000132214 Cgref1Q8R1U2 281 aa7.71□□□□□ -1.18
Ccdc38-203ENSMUST00000132214 Saal1Q9D2C2 474 aa7.71□□□□□ -1.18
Ccdc38-203ENSMUST00000132214 Upf1Q9EPU0 1124 aaKnown RBP7.71□□□□□ -1.18
Ccdc38-203ENSMUST00000132214 Tex14Q7M6U3 1450 aa7.7□□□□□ -1.18
Ccdc38-203ENSMUST00000132214 Nfatc2ipO09130 412 aa7.7□□□□□ -1.18
Retrieved 100 of 22,080 RNA–protein pairs in 115.2 ms