RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 1700018F24RikB2RW27 314 aa12.55□□□□□ -0.4
Scn8a-203ENSMUST00000108908 GmnnO88513 206 aa12.55□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Kiaa1211Q5PR69 1207 aa12.55□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Cd274Q9EP73 290 aa12.55□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Stk36Q69ZM6 1316 aa12.55□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Bin2D3Z6Q9 489 aa12.55□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Hfm1D3Z4R1 1434 aa12.55□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Pdcl2Q78Y63 240 aa12.54□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Psrc1Q9D0P7 329 aa12.54□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Cabp5Q9JLK3 173 aa12.54□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Armc3A2AU72 881 aa12.54□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Idi1P58044 227 aa12.54□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Exoc3Q6KAR6 755 aa12.54□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Kiaa1524Q8BWY9 907 aa12.54□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Akap2O54931 893 aa12.54□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Kif22Q3V300 660 aa12.54□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Iffo1Q8BXL9 562 aa12.54□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Tpd52l2Q9CYZ2 220 aaKnown RBP12.54□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Pde3aQ9Z0X4 1141 aa12.54□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Mcm6P97311 821 aa12.54□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Gas8Q60779 478 aa12.54□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Tmco5aQ9D9D5 303 aa12.54□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Smco2Q9DA21 347 aa12.54□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Uhrf1bp1lA2RSJ4 1457 aa12.54□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Prl7a2O54831 253 aa12.54□□□□□ -0.4
Scn8a-203ENSMUST00000108908 TsksO54887 585 aa12.54□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Tcerg1lQ3B807 590 aa12.54□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Sass6Q80UK7 654 aa12.54□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Plcd1Q8R3B1 756 aa12.54□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Kdm6bQ5NCY0 1641 aa12.53□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Adamts12Q811B3 1600 aa12.53□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Palm3A2TJV2 734 aa12.53□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Epb41l2O70318 988 aaKnown RBP12.53□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Nucb2P81117 420 aa12.53□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Large2Q5XPT3 690 aa12.53□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Eno4Q8C042 619 aa12.53□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Ndufa8Q9DCJ5 172 aa12.53□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Zfp853A0A1D5RM95 733 aa12.53□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Anxa1P10107 346 aaKnown RBP12.53□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Cfap157Q0VFX2 523 aa12.53□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Ccdc42Q5SV66 316 aa12.53□□□□□ -0.4
Scn8a-203ENSMUST00000108908 SltmQ8CH25 1031 aaKnown RBP12.53□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Prr16A3KMN5 304 aa12.53□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Arglu1Q3UL36 271 aaKnown RBP12.53□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Bst2Q8R2Q8 172 aa12.53□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Gm29094F6Q785 221 aa12.53□□□□□ -0.4
Scn8a-203ENSMUST00000108908 RalylQ8BTF8 293 aa12.53□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Ccdc105Q9D4K7 499 aa12.53□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Nup160Q9Z0W3 1402 aaKnown RBP12.53□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Eya2O08575 532 aa12.52□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Lrrc43Q3V0L5 667 aa12.52□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Ncaph2Q8BSP2 607 aa12.52□□□□□ -0.4
Scn8a-203ENSMUST00000108908 SdsQ8VBT2 327 aa12.52□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Sap30bpQ02614 308 aa12.52□□□□□ -0.4
Scn8a-203ENSMUST00000108908 PicalmQ7M6Y3 660 aaKnown RBP12.52□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Ddx27Q921N6 760 aaKnown RBP12.52□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Tacc2Q9JJG0 1149 aa12.52□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Gna11P21278 359 aa12.52□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Pls1Q3V0K9 630 aa12.52□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Ppfibp1Q8C8U0 969 aaKnown RBP12.52□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Ppp1r3fQ9JIG4 799 aa12.52□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Slc27a3O88561 667 aa12.52□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Mybl2P48972 704 aa12.52□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Foxo3Q9WVH4 672 aa12.52□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Gm4758L7N258 96 aa12.51□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Prune1Q8BIW1 454 aa12.51□□□□□ -0.41
Scn8a-203ENSMUST00000108908 E9QMW4 1145 aa12.51□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Gm10378F6XQQ1 160 aa12.51□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Atp6v1aP50516 617 aaKnown RBP12.51□□□□□ -0.41
Scn8a-203ENSMUST00000108908 AdpgkQ8VDL4 496 aa12.51□□□□□ -0.41
Scn8a-203ENSMUST00000108908 NapaQ9DB05 295 aa12.51□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Egfl6Q9JJZ5 550 aa12.51□□□□□ -0.41
Scn8a-203ENSMUST00000108908 PpardP35396 440 aa12.51□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Map3k12Q60700 888 aa12.51□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Fermt1P59113 677 aa12.51□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Dcaf17Q3TUL7 519 aa12.51□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Adora1Q60612 326 aa12.51□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Igbp1Q61249 340 aa12.51□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Haus6Q6NV99 933 aaKnown RBP12.51□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Ccdc89Q9DA73 370 aa12.51□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Ccdc85cE9Q6B2 420 aa12.51□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Mcm7Q61881 719 aaKnown RBP12.51□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Tab2Q99K90 693 aa12.51□□□□□ -0.41
Scn8a-203ENSMUST00000108908 AlkP97793 1621 aa12.51□□□□□ -0.41
Scn8a-203ENSMUST00000108908 SsbP32067 415 aaKnown RBP12.5□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Uso1Q9Z1Z0 959 aaKnown RBP12.5□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Mtmr7Q9Z2C9 660 aa12.5□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Kdm2bQ6P1G2 1309 aa12.5□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Capza3P70190 299 aa12.5□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Smarcad1Q04692 1021 aa12.5□□□□□ -0.41
Scn8a-203ENSMUST00000108908 EspnlQ3UYR4 1005 aa12.5□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Ccdc94Q9D6J3 314 aa12.5□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Fam107bQ3TGF2 131 aa12.5□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Als2cr12Q8BVM7 383 aa12.5□□□□□ -0.41
Scn8a-203ENSMUST00000108908 SfpqQ8VIJ6 699 aaKnown RBP12.5□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Parp1P11103 1013 aaKnown RBP12.5□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Snapc4Q8BP86 1333 aa12.5□□□□□ -0.41
Scn8a-203ENSMUST00000108908 FancaQ9JL70 1439 aa12.5□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Atg4a-psA0A0G2JFS9 396 aa12.5□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Utp18Q5SSI6 552 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms