RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Hspa8P63017 646 aaKnown RBP15.16■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Fam83bQ0VBM2 1012 aa15.16■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 CrkQ64010 304 aa15.16■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Sptlc3Q8BG54 563 aa15.16■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Mboat7Q8CHK3 473 aa15.16■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 HdlbpQ8VDJ3 1268 aaKnown RBP15.16■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Pcdhb5Q91XZ5 792 aa15.16■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Nphp3Q7TNH6 1325 aa15.16■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Arfgef1G3X9K3 1846 aaKnown RBP15.15■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Zmynd8A2A484 1235 aaKnown RBP15.15■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Slc4a10Q5DTL9 1118 aa15.15■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Fam102bQ8BQS4 339 aa15.15■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Atp8b2P98199 1209 aa15.14■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Gsdma2Q32M21 443 aa15.14■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Cwc27Q3TKY6 469 aa15.14■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Gxylt1Q3UHH8 404 aa15.14■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 NfkbibQ60778 359 aa15.14■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Senp5Q6NXL6 749 aa15.14■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Nova2D3YVV7 556 aaKnown RBP15.13■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Adam7O35227 789 aa15.13■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Itgb7P26011 806 aa15.13■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Fdx1P46656 188 aa15.13■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Slc4a7Q8BTY2 1034 aa15.13■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Fam83aQ8K2P2 436 aa15.13■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Zbtb3Q91X45 518 aa15.13■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Gbp7Q91Z40 638 aa15.13■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 RarsQ9D0I9 660 aaKnown RBP15.13■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Gm3893E9Q1I1 302 aa15.12■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Timm10P62073 90 aa15.12■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Ppp1r21Q3TDD9 780 aa15.12■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Ccdc148Q6P5U8 527 aa15.12■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Tmem179Q8BHH9 233 aa15.12■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Cry2Q9R194 592 aa15.12■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 S1pr4Q9Z0L1 386 aa15.12■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Ccne2Q9Z238 404 aa15.12■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Prr14lE9Q7C4 1971 aa15.12■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Prss51A0A286YDY8 319 aa15.11■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 TsksO54887 585 aa15.11■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Mapkapk5O54992 473 aa15.11■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Serpinb2P12388 415 aa15.11■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Ets1P27577 440 aa15.11■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Mansc4Q3UU94 337 aa15.11■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Map3k12Q60700 888 aa15.11■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 AsnsQ61024 561 aa15.11■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Psen2Q61144 448 aa15.11■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Tm4sf1Q64302 202 aa15.11■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Rbm15bQ6PHZ5 887 aaKnown RBP15.11■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Trpv1Q704Y3 839 aa15.11■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Adam39Q7M762 756 aa15.11■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Snap47Q8R570 413 aa15.11■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Apbb1Q9QXJ1 710 aa15.11■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Sh2d1b2Q45HK4 132 aa15.1■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Trim58Q5NCC9 485 aa15.1■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Abtb2Q7TQI7 1024 aa15.1■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Ppp1r42Q8R1Z4 357 aa15.1■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 ParnQ8VDG3 624 aa15.1■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Noc3lQ8VI84 807 aaKnown RBP15.1■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Rwdd1Q9CQK7 243 aa15.1■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Rnf181Q9CY62 165 aa15.1■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Npc1l1Q6T3U4 1333 aa15.1■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Tanc1Q0VGY8 1856 aa15.1■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 CnpP16330 420 aa15.09■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Tfcp2l1Q3UNW5 479 aa15.09■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Foxd1Q61345 456 aa15.09■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Gimap3Q99MI6 301 aa15.09■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Borcs6Q9D6W8 360 aa15.09■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Sart3Q9JLI8 962 aaKnown RBP15.09■□□□□ 0.01
Ccdc28b-202ENSMUST00000106035 Tuft1O08970 390 aa15.08■□□□□ 0
Ccdc28b-202ENSMUST00000106035 L1camP11627 1260 aa15.08■□□□□ 0
Ccdc28b-202ENSMUST00000106035 Lins1Q3U1D0 764 aa15.08■□□□□ 0
Ccdc28b-202ENSMUST00000106035 Mctp2Q5RJH2 878 aa15.08■□□□□ 0
Ccdc28b-202ENSMUST00000106035 Lamc2Q61092 1191 aa15.08■□□□□ 0
Ccdc28b-202ENSMUST00000106035 Trnp1Q80ZI1 223 aa15.08■□□□□ 0
Ccdc28b-202ENSMUST00000106035 Ireb2Q811J3 963 aaKnown RBP15.08■□□□□ 0
Ccdc28b-202ENSMUST00000106035 Srgap3Q812A2 1099 aa15.08■□□□□ 0
Ccdc28b-202ENSMUST00000106035 Uba5Q8VE47 403 aa15.08■□□□□ 0
Ccdc28b-202ENSMUST00000106035 NsmfQ99NF2 532 aa15.08■□□□□ 0
Ccdc28b-202ENSMUST00000106035 Bcs1lQ9CZP5 418 aa15.08■□□□□ 0
Ccdc28b-202ENSMUST00000106035 Chmp4bQ9D8B3 224 aaKnown RBP15.08■□□□□ 0
Ccdc28b-202ENSMUST00000106035 Jag1Q9QXX0 1218 aa15.08■□□□□ 0
Ccdc28b-202ENSMUST00000106035 Myh13B1AR69 1938 aa15.07■□□□□ 0
Ccdc28b-202ENSMUST00000106035 Skint7A7XV04 395 aa15.07■□□□□ 0
Ccdc28b-202ENSMUST00000106035 Triml2E9PW10 424 aa15.07■□□□□ 0
Ccdc28b-202ENSMUST00000106035 Usp17ldG5E8G2 545 aa15.07■□□□□ 0
Ccdc28b-202ENSMUST00000106035 Usp17lcG5E8I7 545 aa15.07■□□□□ 0
Ccdc28b-202ENSMUST00000106035 Neurod6P48986 337 aa15.07■□□□□ 0
Ccdc28b-202ENSMUST00000106035 Tm6sf1P58749 370 aa15.07■□□□□ 0
Ccdc28b-202ENSMUST00000106035 Traf5P70191 558 aa15.07■□□□□ 0
Ccdc28b-202ENSMUST00000106035 Slc7a3P70423 618 aa15.07■□□□□ 0
Ccdc28b-202ENSMUST00000106035 Spryd7Q3TFQ1 196 aa15.07■□□□□ 0
Ccdc28b-202ENSMUST00000106035 Lgr6Q3UVD5 967 aa15.07■□□□□ 0
Ccdc28b-202ENSMUST00000106035 MsraQ9D6Y7 233 aa15.07■□□□□ 0
Ccdc28b-202ENSMUST00000106035 Mkrn1Q9QXP6 481 aa15.07■□□□□ 0
Ccdc28b-202ENSMUST00000106035 Abcc4E9Q236 1325 aa15.07■□□□□ 0
Ccdc28b-202ENSMUST00000106035 Col11a1Q61245 1804 aa15.06■□□□□ 0
Ccdc28b-202ENSMUST00000106035 Prl7d1P04769 244 aa15.06■□□□□ 0
Ccdc28b-202ENSMUST00000106035 Trmt1Q3TX08 663 aa15.06■□□□□ 0
Ccdc28b-202ENSMUST00000106035 Klrg2Q3UM83 387 aa15.06■□□□□ 0
Ccdc28b-202ENSMUST00000106035 Washc4Q3UMB9 1173 aa15.06■□□□□ 0
Ccdc28b-202ENSMUST00000106035 Nlrp9aQ66X03 949 aa15.06■□□□□ 0
Retrieved 100 of 22,080 RNA–protein pairs in 46.5 ms