RNA–Protein interactions for RNA: ENSMUST00000057438.6

Vcpip1-201, Transcript of Deubiquitinating protein VCIP135, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcpip1, Length 9,749 nt, Biotype protein coding, Subcellular localisation Nucleus, Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1-201ENSMUST00000057438 Snx25Q3ZT31 840 aa13.93□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Hand2Q61039 217 aa13.93□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Rdm1Q9CQK3 281 aa13.93□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Pde3aQ9Z0X4 1141 aa13.93□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Capn2O08529 700 aa13.93□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Ddx49Q4FZF3 480 aaKnown RBP13.93□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Rbm8a2A0A0N4SUH6 174 aa13.93□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Rbm8aQ9CWZ3 174 aa13.93□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Krt90E9Q1Z0 538 aa13.93□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Nap1l4Q78ZA7 375 aaKnown RBP13.93□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Lmod1Q8BVA4 595 aa13.93□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Taf4bG5E8Z2 855 aa13.93□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 OvosQ3UU35 1456 aa13.93□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Atp2b1G5E829 1220 aa13.92□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Trove2O08848 538 aa13.92□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Rrbp1Q99PL5 1605 aaKnown RBP13.92□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Sclt1G5E861 688 aa13.92□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Becn2P0DM65 447 aa13.92□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Sh2b1Q91ZM2 756 aa13.92□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Arhgef12Q8R4H2 1543 aaKnown RBP13.92□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Sos2Q02384 1333 aa13.92□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Vgll3P85442 326 aa13.92□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Sox13Q04891 613 aa13.92□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Idi2Q8BFZ6 227 aa13.92□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 DymQ8CHY3 669 aa13.92□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Gm2030D3Z7C4 212 aa13.92□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Acot9Q9R0X4 439 aaKnown RBP13.92□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Mlh3A0A1Y7VMP7 1443 aa13.92□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Mrc2Q64449 1479 aa13.92□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Ccdc174Q3U155 467 aa13.92□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Stoml1Q8CI66 399 aa13.92□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 WizO88286 1684 aaKnown RBP13.92□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Sbno1Q689Z5 1390 aa13.92□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Oas2E9Q9A9 742 aa13.91□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Gm5934D3Z4U6 212 aa13.91□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Swap70Q6A028 585 aaKnown RBP13.91□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Tcp11l1Q8BTG3 509 aa13.91□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Rab44Q8CB87 725 aa13.91□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Afap1Q80YS6 731 aa13.91□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Ifih1Q8R5F7 1025 aa13.91□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Gm3409A0A0G2JE67 319 aa13.91□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Zrsr1Q64707 428 aa13.91□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Trim68Q8K243 485 aa13.91□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Atf7ipQ7TT18 1306 aa13.91□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Xrcc4Q924T3 326 aa13.91□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Pet2A2AHY8 747 aa13.91□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Zbtb21E9Q444 1094 aa13.91□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Pnpla2Q8BJ56 486 aa13.91□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 PpanQ91YU8 470 aaKnown RBP13.91□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Homer2Q9QWW1 354 aa13.91□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Shroom2A2ALU4 1481 aa13.9□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Gm6583E9Q8Z1 469 aa13.9□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Cracr2aQ3UP38 310 aa13.9□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Ift122Q6NWV3 1182 aa13.9□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Brd1E9PZ26 1189 aaKnown RBP13.9□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Ankrd35E9Q9D8 996 aa13.9□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Palm3A2TJV2 734 aa13.9□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Rufy3Q9D394 469 aa13.9□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Naip7Q9JIB3 1402 aa13.9□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Naip6Q9JIB6 1403 aa13.9□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 4930548H24RikQ9D496 437 aa13.9□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Lrrc74aA0A1Y7VMD6 494 aa13.9□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Stmn1P54227 149 aaKnown RBP13.9□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Ncf1Q09014 390 aa13.9□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Trim27Q62158 513 aa13.9□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Grm8P47743 908 aa13.89□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Ppp2r5eQ61151 467 aa13.89□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Ccdc113Q8C5T8 377 aa13.89□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 RilpQ5ND29 369 aa13.89□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Lamc3Q9R0B6 1581 aa13.89□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Dnajc21E9Q8D0 531 aa13.89□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Eef2P58252 858 aaKnown RBP13.89□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Tmx3Q8BXZ1 456 aa13.89□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Pik3ap1Q9EQ32 811 aa13.89□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Exoc3Q6KAR6 755 aa13.89□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Ccdc28aQ8CEI3 192 aa13.89□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 St5Q924W7 1134 aa13.89□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Tsnaxip1Q99P25 704 aa13.89□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Nup62clA2AG10 272 aa13.89□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 MmeQ61391 750 aa13.89□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Lin9Q8C735 542 aa13.89□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Gbp6A0A0G2JDV3 611 aa13.89□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Gm43302L7N1X8 611 aa13.89□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Ribc1Q9D0B8 379 aa13.89□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Cdca7Q9D0M2 382 aa13.89□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Tpcn1Q9EQJ0 817 aa13.89□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Apbb1ipQ8R5A3 670 aa13.89□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Ccne1Q61457 408 aa13.89□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Pcdhb2Q91Y00 799 aa13.89□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Snd1Q78PY7 910 aaKnown RBP13.88□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Aldh1l2Q8K009 923 aa13.88□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Igf1rQ60751 1373 aa13.88□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Esyt2Q3TZZ7 845 aa13.88□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Gm5935Q497S0 212 aa13.88□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Atp2a3Q64518 1038 aa13.88□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 GptQ8QZR5 496 aa13.88□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Ccdc105Q9D4K7 499 aa13.88□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 HnrnpcQ9Z204 313 aaKnown RBP13.88□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Naip5Q9R016 1403 aa13.88□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Luc7l3Q5SUF2 432 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 78.1 ms