RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Asxl1P59598 1514 aa17.58■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Stim2P83093 746 aa17.58■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Sept8Q8CHH9 429 aa17.58■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Zmym4A2A791 1549 aaKnown RBP17.58■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Ankrd44B2RXR6 993 aa17.58■□□□□ 0.4
Ubr3-201ENSMUST00000055758 MarcksP26645 309 aaKnown RBP17.58■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Tacc2Q9JJG0 1149 aa17.58■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Rad50P70388 1312 aa17.58■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Gm1993A6X8I0 212 aa17.58■□□□□ 0.4
Ubr3-201ENSMUST00000055758 SlxD3Z347 212 aa17.58■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Gnat3Q3V3I2 354 aa17.57■□□□□ 0.4
Ubr3-201ENSMUST00000055758 HellsQ60848 821 aa17.57■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Dnajc21E9Q8D0 531 aa17.57■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Myd88P22366 296 aa17.57■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Wdhd1P59328 1117 aa17.57■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Naip1Q9QWK5 1403 aa17.57■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Calm1P0DP26 149 aaKnown RBP17.57■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Calm2P0DP27 149 aaKnown RBP17.57■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Calm3P0DP28 149 aaKnown RBP17.57■□□□□ 0.4
Ubr3-201ENSMUST00000055758 CalcaP70160 136 aa17.57■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Snx25Q3ZT31 840 aa17.57■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Ptpn14Q62130 1189 aa17.57■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Ppp1r10Q80W00 888 aaKnown RBP17.57■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Ttc12Q8BW49 704 aa17.57■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Ccdc89Q9DA73 370 aa17.57■□□□□ 0.4
Ubr3-201ENSMUST00000055758 MmeQ61391 750 aa17.57■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Haus1Q8BHX1 278 aa17.57■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Gbp5Q8CFB4 590 aa17.57■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Arhgef5E9Q7D5 1581 aa17.57■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Myl3P09542 204 aa17.57■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Atp6v0a2P15920 856 aa17.57■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Mcm5P49718 733 aa17.57■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Ttc1Q91Z38 292 aa17.57■□□□□ 0.4
Ubr3-201ENSMUST00000055758 InsrP15208 1372 aa17.57■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Ankrd35E9Q9D8 996 aa17.56■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Gm136Q3V037 328 aa17.56■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Pex1Q5BL07 1284 aa17.56■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Myh11O08638 1972 aa17.56■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Trove2O08848 538 aa17.56■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Mcm7Q61881 719 aaKnown RBP17.56■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Chpf2Q3UU43 768 aa17.56■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Pdia3P27773 505 aaKnown RBP17.56■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Pabpn1lQ5XFR0 273 aa17.56■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Ccne1Q61457 408 aa17.56■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Pank2Q3U4S0 443 aa17.56■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Kif2bQ8C0N1 668 aa17.56■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Atp6v0a4Q920R6 833 aa17.56■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Mgea5Q9EQQ9 916 aa17.56■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Dpf1Q9QX66 387 aa17.56■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Atp8b3Q6UQ17 1335 aa17.56■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Hmgb1P63158 215 aaKnown RBP17.55■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Leo1Q5XJE5 667 aa17.55■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Ccdc82Q6PG04 518 aa17.55■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Actr5Q80US4 605 aaKnown RBP17.55■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Krit1Q6S5J6 736 aa17.55■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Srek1ip1Q4V9W2 153 aa17.55■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Krt90E9Q1Z0 538 aa17.55■□□□□ 0.4
Ubr3-201ENSMUST00000055758 4930548H24RikQ9D496 437 aa17.55■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Taf4bG5E8Z2 855 aa17.55■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Gm10093D3YYI8 482 aa17.55■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Hdac1O09106 482 aaKnown RBP17.55■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Mier3Q3UHF3 551 aa17.55■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Ift20Q61025 132 aa17.55■□□□□ 0.4
Ubr3-201ENSMUST00000055758 DlatQ8BMF4 642 aa17.55■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Speer4dL7N216 212 aa17.54■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Mindy4Q3UQI9 744 aa17.54■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Syce1Q9D495 329 aa17.54■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Speer2E9Q9U2 264 aa17.54■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Znf18Q810A1 556 aa17.54■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Tmco4Q91WU4 631 aa17.54■□□□□ 0.4
Ubr3-201ENSMUST00000055758 St13Q99L47 371 aaKnown RBP17.54■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Gipc1Q9Z0G0 333 aa17.54■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Atp6v1e1P50518 226 aa17.54■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Apol7eQ3UZ24 369 aa17.54■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Slc14a2Q8R4T9 930 aa17.54■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Atp12aQ9Z1W8 1035 aa17.54■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Kank1E9Q238 1360 aa17.54■□□□□ 0.4
Ubr3-201ENSMUST00000055758 TprnA2AI08 749 aaKnown RBP17.54■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Dennd3A2RT67 1274 aa17.54■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Serpinb1cQ5SV42 375 aa17.54■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Mybpc2Q5XKE0 1136 aa17.54■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Acnat2Q8BGG9 420 aa17.54■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Epb41l3Q9WV92 929 aa17.54■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Atad3Q925I1 591 aa17.53■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Gucy1b3O54865 620 aa17.53■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Cwc25Q9DBF7 416 aa17.53■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Arid3aQ62431 601 aa17.53■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Usp37Q8C0R0 979 aa17.53■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Slc12a5Q91V14 1138 aa17.53■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Nlrp2Q4PLS0 1046 aaKnown RBP17.53■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Rassf10Q8BL43 508 aa17.53■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Rtn1Q8K0T0 780 aa17.53■□□□□ 0.4
Ubr3-201ENSMUST00000055758 CacybpQ9CXW3 229 aa17.53■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Ppp2r5cQ60996 524 aa17.53■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Znf280dQ68FE8 974 aa17.53■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Rfwd2Q9R1A8 733 aaKnown RBP17.53■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Slc4a4O88343 1079 aa17.53■□□□□ 0.4
Ubr3-201ENSMUST00000055758 PpardP35396 440 aa17.53■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Zap70P43404 618 aa17.53■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Trim27Q62158 513 aa17.53■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 130.9 ms