RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Ifi207E9Q3L4 978 aa8.22□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Stn1Q8K2X3 378 aa8.22□□□□□ -1.09
Bdnf-201ENSMUST00000053317 EspnQ9ET47 871 aa8.22□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Samd1D3YXK1 519 aa8.21□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Pagr1bF6V0H0 108 aa8.21□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Cyp24a1Q64441 514 aa8.21□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Gm2163Q6PCY5 473 aa8.21□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Slc4a8Q8JZR6 1089 aa8.21□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Pagr1aQ99L02 253 aa8.21□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Col4a1P02463 1669 aa8.21□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Tuft1O08970 390 aa8.21□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Tm6sf1P58749 370 aa8.21□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Slc10a4Q3UEZ8 437 aa8.21□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Pus3Q9JI38 481 aa8.21□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Kat6bQ8BRB7 1872 aa8.21□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Sned1Q70E20 1403 aa8.21□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Sept1P42209 366 aa8.21□□□□□ -1.1
Bdnf-201ENSMUST00000053317 NyxP83503 476 aa8.21□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Ift57Q8BXG3 429 aa8.21□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Prkrip1Q9CWV6 186 aaKnown RBP8.21□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Prg3Q9JL95 222 aa8.21□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Kndc1Q0KK55 1742 aa8.21□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Tmem67Q8BR76 992 aa8.2□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Tmod2Q9JKK7 351 aa8.2□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Spata31d1bE9QA57 1361 aa8.2□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Ankrd63A2ARS0 390 aa8.2□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Slc4a4O88343 1079 aa8.2□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Psen2Q61144 448 aa8.2□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Spty2d1Q68FG3 682 aa8.2□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Ddx11Q6AXC6 880 aa8.2□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Ccp110Q7TSH4 1004 aa8.2□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Rbm19Q8R3C6 952 aaKnown RBP8.2□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Rrp9Q91WM3 475 aaKnown RBP8.2□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Pnmal2G3X9N3 661 aa8.2□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Dynll1P63168 89 aa8.2□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Nlrp1aQ2LKU9 1182 aa8.2□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Gcc1Q9D4H2 778 aa8.2□□□□□ -1.1
Bdnf-201ENSMUST00000053317 CsadQ9DBE0 493 aa8.2□□□□□ -1.1
Bdnf-201ENSMUST00000053317 NapbP28663 298 aa8.2□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Usp17lbE9Q9U0 468 aa8.19□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Mdm2P23804 489 aa8.19□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Cap1P40124 474 aa8.19□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Fam196bQ6GQV1 535 aa8.19□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Sept14Q9DA97 430 aa8.19□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Stat5bP42232 786 aa8.19□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Asap2Q7SIG6 958 aa8.19□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Prune1Q8BIW1 454 aa8.19□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Kcnq3Q8K3F6 873 aa8.19□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Lman1lQ8VCD3 505 aa8.19□□□□□ -1.1
Bdnf-201ENSMUST00000053317 EvplQ9D952 2035 aa8.19□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Kcna3P16390 528 aa8.19□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Cetn4Q8K4K1 168 aa8.19□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Vmn1r199Q8R280 367 aa8.19□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Atl3Q91YH5 541 aa8.19□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Map7d2A2AG50 781 aa8.18□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Prl3d1P18121 224 aa8.18□□□□□ -1.1
Bdnf-201ENSMUST00000053317 TbcaP48428 108 aaKnown RBP8.18□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Dpf2Q61103 391 aaKnown RBP8.18□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Jakmip1Q8BVL9 626 aa8.18□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Lonrf3Q9D4H7 753 aa8.18□□□□□ -1.1
Bdnf-201ENSMUST00000053317 IcoslgQ9JHJ8 322 aa8.18□□□□□ -1.1
Bdnf-201ENSMUST00000053317 FocadA2AKG8 1798 aa8.18□□□□□ -1.1
Bdnf-201ENSMUST00000053317 4931408C20RikE9PWP9 1381 aa8.18□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Becn1O88597 448 aa8.18□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Ppfia3P60469 1194 aa8.18□□□□□ -1.1
Bdnf-201ENSMUST00000053317 AidaQ8C4Q6 305 aa8.18□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Rbm10Q99KG3 930 aaKnown RBP8.18□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Armc3A2AU72 881 aa8.18□□□□□ -1.1
Bdnf-201ENSMUST00000053317 NpeppsQ11011 920 aa8.18□□□□□ -1.1
Bdnf-201ENSMUST00000053317 CrkQ64010 304 aa8.18□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Rhot2Q8JZN7 620 aa8.18□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Xrcc4Q924T3 326 aa8.18□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Ciao1Q99KN2 339 aa8.18□□□□□ -1.1
Bdnf-201ENSMUST00000053317 IkQ9Z1M8 557 aaKnown RBP8.18□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Znf541Q0GGX2 1363 aa8.18□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Aknad1E9Q8N6 675 aa8.17□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Vil1Q62468 827 aa8.17□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Tshz3Q8CGV9 1081 aa8.17□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Gtf2a1Q99PM3 378 aa8.17□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Mroh6V9GX81 722 aa8.17□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Setdb1O88974 1307 aa8.17□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Slc4a1P04919 929 aa8.17□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Mctp2Q5RJH2 878 aa8.17□□□□□ -1.1
Bdnf-201ENSMUST00000053317 KhnynQ80U38 671 aa8.17□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Fam43aQ8BUP8 424 aa8.17□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Pold4Q9CWP8 107 aa8.17□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Ush1cQ9ES64 910 aa8.17□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Phactr2B1AVP0 632 aa8.17□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Myl3P09542 204 aa8.17□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Sp4Q62445 782 aa8.17□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Ipo8Q7TMY7 1010 aa8.17□□□□□ -1.1
Bdnf-201ENSMUST00000053317 LdhdQ7TNG8 484 aa8.17□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Tmem179Q8BHH9 233 aa8.17□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Bcs1lQ9CZP5 418 aa8.17□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Prss51A0A286YDY8 319 aa8.17□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Vgll3P85442 326 aa8.17□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Ncbp1Q3UYV9 790 aaKnown RBP8.17□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Kif22Q3V300 660 aa8.17□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Tll1Q62381 1013 aa8.16□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Olfm5Q8BU90 496 aa8.16□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms