RNA–Protein interactions for RNA: ENSMUST00000048077.11

Lime1-201, Transcript of Lck-interacting transmembrane adapter 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lime1, Length 1,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1-201ENSMUST00000048077 Ccne2Q9Z238 404 aa16.25■□□□□ 0.19
Lime1-201ENSMUST00000048077 Myh1Q5SX40 1942 aa16.24■□□□□ 0.19
Lime1-201ENSMUST00000048077 Ccng2O08918 344 aa16.24■□□□□ 0.19
Lime1-201ENSMUST00000048077 Cops6O88545 324 aa16.24■□□□□ 0.19
Lime1-201ENSMUST00000048077 Plbd2Q3TCN2 594 aa16.24■□□□□ 0.19
Lime1-201ENSMUST00000048077 Nlrp9aQ66X03 949 aa16.24■□□□□ 0.19
Lime1-201ENSMUST00000048077 Dnaaf2Q8BPI1 814 aa16.24■□□□□ 0.19
Lime1-201ENSMUST00000048077 Gpr108Q91WD0 569 aa16.24■□□□□ 0.19
Lime1-201ENSMUST00000048077 Cdkn1cP49919 348 aa16.24■□□□□ 0.19
Lime1-201ENSMUST00000048077 Abtb2Q7TQI7 1024 aa16.24■□□□□ 0.19
Lime1-201ENSMUST00000048077 Ano10Q8BH79 659 aa16.24■□□□□ 0.19
Lime1-201ENSMUST00000048077 Fsd2Q8BZ52 692 aa16.24■□□□□ 0.19
Lime1-201ENSMUST00000048077 Alg3Q8K2A8 438 aa16.24■□□□□ 0.19
Lime1-201ENSMUST00000048077 Dnaaf4Q8R368 420 aa16.24■□□□□ 0.19
Lime1-201ENSMUST00000048077 Rcan1Q9JHG6 198 aa16.24■□□□□ 0.19
Lime1-201ENSMUST00000048077 Setdb1O88974 1307 aa16.23■□□□□ 0.19
Lime1-201ENSMUST00000048077 Cfap44E9Q5M6 1843 aa16.23■□□□□ 0.19
Lime1-201ENSMUST00000048077 Ankrd31A0A140LI88 1765 aa16.23■□□□□ 0.19
Lime1-201ENSMUST00000048077 Gm20425E9Q035 978 aaKnown RBP16.23■□□□□ 0.19
Lime1-201ENSMUST00000048077 Sept1P42209 366 aa16.23■□□□□ 0.19
Lime1-201ENSMUST00000048077 SrprbP47758 269 aa16.23■□□□□ 0.19
Lime1-201ENSMUST00000048077 Gm28047Q3US59 414 aa16.23■□□□□ 0.19
Lime1-201ENSMUST00000048077 Hand2Q61039 217 aa16.23■□□□□ 0.19
Lime1-201ENSMUST00000048077 Nme8Q715T0 586 aa16.23■□□□□ 0.19
Lime1-201ENSMUST00000048077 Dcaf5Q80T85 946 aa16.23■□□□□ 0.19
Lime1-201ENSMUST00000048077 Acsbg1Q99PU5 721 aa16.23■□□□□ 0.19
Lime1-201ENSMUST00000048077 Nip7Q9CXK8 180 aaKnown RBP16.23■□□□□ 0.19
Lime1-201ENSMUST00000048077 Cyp3a59D3Z2W7 503 aa16.22■□□□□ 0.19
Lime1-201ENSMUST00000048077 Pde8bE9Q4S1 865 aa16.22■□□□□ 0.19
Lime1-201ENSMUST00000048077 Trim34bJ3QNR8 485 aa16.22■□□□□ 0.19
Lime1-201ENSMUST00000048077 FosbP13346 338 aa16.22■□□□□ 0.19
Lime1-201ENSMUST00000048077 CebpzP53569 1052 aaKnown RBP16.22■□□□□ 0.19
Lime1-201ENSMUST00000048077 Edrf1Q6GQV7 1239 aa16.22■□□□□ 0.19
Lime1-201ENSMUST00000048077 Pcdhb15Q91Y04 786 aa16.22■□□□□ 0.19
Lime1-201ENSMUST00000048077 Fam84aQ9D650 292 aa16.22■□□□□ 0.19
Lime1-201ENSMUST00000048077 Dusp10Q9ESS0 483 aa16.22■□□□□ 0.19
Lime1-201ENSMUST00000048077 Syt10Q9R0N4 523 aa16.22■□□□□ 0.19
Lime1-201ENSMUST00000048077 IncenpQ9WU62 880 aa16.22■□□□□ 0.19
Lime1-201ENSMUST00000048077 Foxo4Q9WVH3 505 aa16.22■□□□□ 0.19
Lime1-201ENSMUST00000048077 Pcdhb9E9Q5G2 828 aa16.22■□□□□ 0.19
Lime1-201ENSMUST00000048077 Igflr1Q3U4N7 345 aa16.22■□□□□ 0.19
Lime1-201ENSMUST00000048077 TrhQ62361 256 aa16.22■□□□□ 0.19
Lime1-201ENSMUST00000048077 Jmjd4Q8BFT6 427 aa16.22■□□□□ 0.19
Lime1-201ENSMUST00000048077 SdsQ8VBT2 327 aa16.22■□□□□ 0.19
Lime1-201ENSMUST00000048077 Cnot6lQ8VEG6 555 aa16.22■□□□□ 0.19
Lime1-201ENSMUST00000048077 Tpd52l1O54818 204 aa16.21■□□□□ 0.19
Lime1-201ENSMUST00000048077 MsnP26041 577 aaKnown RBP16.21■□□□□ 0.19
Lime1-201ENSMUST00000048077 Cdkl5Q3UTQ8 938 aa16.21■□□□□ 0.19
Lime1-201ENSMUST00000048077 BcanQ61361 883 aa16.21■□□□□ 0.19
Lime1-201ENSMUST00000048077 Atp1a3Q6PIC6 1013 aa16.21■□□□□ 0.19
Lime1-201ENSMUST00000048077 Pip4k2bQ80XI4 416 aa16.21■□□□□ 0.19
Lime1-201ENSMUST00000048077 Stk38Q91VJ4 465 aa16.21■□□□□ 0.19
Lime1-201ENSMUST00000048077 Nop2Q922K7 793 aaKnown RBP16.21■□□□□ 0.19
Lime1-201ENSMUST00000048077 Tlcd1Q99JT6 247 aa16.21■□□□□ 0.19
Lime1-201ENSMUST00000048077 Mei1Q9D4I2 1268 aa16.21■□□□□ 0.19
Lime1-201ENSMUST00000048077 Ifi35Q9D8C4 286 aa16.21■□□□□ 0.19
Lime1-201ENSMUST00000048077 Gm43638A0A0J9YU36 694 aa16.2■□□□□ 0.18
Lime1-201ENSMUST00000048077 Prr29B1ARI9 187 aa16.2■□□□□ 0.18
Lime1-201ENSMUST00000048077 Casp12O08736 419 aa16.2■□□□□ 0.18
Lime1-201ENSMUST00000048077 Slc38a10Q5I012 1090 aa16.2■□□□□ 0.18
Lime1-201ENSMUST00000048077 Adam1aQ60813 791 aa16.2■□□□□ 0.18
Lime1-201ENSMUST00000048077 Q8BZJ8 459 aa16.2■□□□□ 0.18
Lime1-201ENSMUST00000048077 CpdO89001 1377 aa16.2■□□□□ 0.18
Lime1-201ENSMUST00000048077 Oas2E9Q9A9 742 aa16.2■□□□□ 0.18
Lime1-201ENSMUST00000048077 Ms4a1P19437 291 aa16.2■□□□□ 0.18
Lime1-201ENSMUST00000048077 Sptlc2P97363 560 aaKnown RBP16.2■□□□□ 0.18
Lime1-201ENSMUST00000048077 Plekhf1Q3TB82 279 aa16.2■□□□□ 0.18
Lime1-201ENSMUST00000048077 Itga6Q61739 1091 aa16.2■□□□□ 0.18
Lime1-201ENSMUST00000048077 Dhx40Q6PE54 779 aaKnown RBP16.2■□□□□ 0.18
Lime1-201ENSMUST00000048077 VmacQ8BP01 174 aa16.2■□□□□ 0.18
Lime1-201ENSMUST00000048077 CrebrfQ8CDG5 640 aaKnown RBP16.2■□□□□ 0.18
Lime1-201ENSMUST00000048077 Ccdc47Q9D024 483 aaKnown RBP16.2■□□□□ 0.18
Lime1-201ENSMUST00000048077 Mast3Q3U214 1321 aa16.19■□□□□ 0.18
Lime1-201ENSMUST00000048077 Med23Q80YQ2 1367 aa16.19■□□□□ 0.18
Lime1-201ENSMUST00000048077 Anxa1P10107 346 aaKnown RBP16.19■□□□□ 0.18
Lime1-201ENSMUST00000048077 Ginm1Q91WR6 327 aa16.19■□□□□ 0.18
Lime1-201ENSMUST00000048077 Nrbp1Q99J45 535 aa16.19■□□□□ 0.18
Lime1-201ENSMUST00000048077 Zbtb43Q9DAI4 467 aa16.19■□□□□ 0.18
Lime1-201ENSMUST00000048077 Plekho1Q9JIY0 408 aa16.19■□□□□ 0.18
Lime1-201ENSMUST00000048077 Brwd3A2AHJ4 1799 aa16.19■□□□□ 0.18
Lime1-201ENSMUST00000048077 FAM186AQ9D9R9 1790 aa16.19■□□□□ 0.18
Lime1-201ENSMUST00000048077 Rgs12Q8CGE9 1381 aa16.19■□□□□ 0.18
Lime1-201ENSMUST00000048077 Cyp2d9P11714 504 aa16.18■□□□□ 0.18
Lime1-201ENSMUST00000048077 Ercc3P49135 783 aa16.18■□□□□ 0.18
Lime1-201ENSMUST00000048077 Cplx2P84086 134 aa16.18■□□□□ 0.18
Lime1-201ENSMUST00000048077 Zkscan4Q5SZT6 480 aa16.18■□□□□ 0.18
Lime1-201ENSMUST00000048077 Sptlc3Q8BG54 563 aa16.18■□□□□ 0.18
Lime1-201ENSMUST00000048077 Kcnk13Q8R1P5 405 aa16.18■□□□□ 0.18
Lime1-201ENSMUST00000048077 Emilin1Q99K41 1017 aa16.18■□□□□ 0.18
Lime1-201ENSMUST00000048077 Krt84Q99M73 603 aa16.18■□□□□ 0.18
Lime1-201ENSMUST00000048077 Clic4Q9QYB1 253 aa16.18■□□□□ 0.18
Lime1-201ENSMUST00000048077 Bin2D3Z6Q9 489 aa16.18■□□□□ 0.18
Lime1-201ENSMUST00000048077 Slu7Q8BHJ9 585 aa16.18■□□□□ 0.18
Lime1-201ENSMUST00000048077 Sox30Q8CGW4 782 aa16.18■□□□□ 0.18
Lime1-201ENSMUST00000048077 Atp2b1G5E829 1220 aa16.17■□□□□ 0.18
Lime1-201ENSMUST00000048077 Nom1Q3UFM5 854 aaKnown RBP16.17■□□□□ 0.18
Lime1-201ENSMUST00000048077 Sik1Q60670 779 aa16.17■□□□□ 0.18
Lime1-201ENSMUST00000048077 Ano6Q6P9J9 911 aa16.17■□□□□ 0.18
Lime1-201ENSMUST00000048077 IqcgQ80W32 419 aa16.17■□□□□ 0.18
Lime1-201ENSMUST00000048077 Ccz1Q8C1Y8 480 aa16.17■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms