RNA–Protein interactions for RNA: ENSMUST00000042012.6

Sf3b3-201, Transcript of Splicing factor 3B subunit 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b3, Length 4,525 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3-201ENSMUST00000042012 Usp19Q3UJD6 1360 aa10.53□□□□□ -0.72
Sf3b3-201ENSMUST00000042012 Cyp2c23E9Q5K4 494 aa10.53□□□□□ -0.72
Sf3b3-201ENSMUST00000042012 Tsg101Q61187 391 aa10.53□□□□□ -0.72
Sf3b3-201ENSMUST00000042012 Trim52Q8CDV4 233 aa10.53□□□□□ -0.72
Sf3b3-201ENSMUST00000042012 Taf12Q8VE65 161 aa10.53□□□□□ -0.72
Sf3b3-201ENSMUST00000042012 Mbd5B1AYB6 1498 aa10.53□□□□□ -0.72
Sf3b3-201ENSMUST00000042012 Cdk12Q14AX6 1484 aaKnown RBP10.53□□□□□ -0.72
Sf3b3-201ENSMUST00000042012 Ccdc174Q3U155 467 aa10.53□□□□□ -0.72
Sf3b3-201ENSMUST00000042012 Prpf38aQ4FK66 312 aaKnown RBP10.53□□□□□ -0.72
Sf3b3-201ENSMUST00000042012 Dcaf15Q6PFH3 600 aa10.53□□□□□ -0.72
Sf3b3-201ENSMUST00000042012 Kiaa1024Q8K3V7 917 aa10.53□□□□□ -0.72
Sf3b3-201ENSMUST00000042012 Foxp4Q9DBY0 795 aaKnown RBP10.53□□□□□ -0.72
Sf3b3-201ENSMUST00000042012 RereQ80TZ9 1558 aa10.53□□□□□ -0.72
Sf3b3-201ENSMUST00000042012 Ripply1Q2WG77 201 aa10.53□□□□□ -0.72
Sf3b3-201ENSMUST00000042012 Ccdc150Q8CDI7 1110 aa10.53□□□□□ -0.72
Sf3b3-201ENSMUST00000042012 Lrit1Q8K099 624 aa10.53□□□□□ -0.72
Sf3b3-201ENSMUST00000042012 Btn2a2A4QPC6 514 aa10.52□□□□□ -0.72
Sf3b3-201ENSMUST00000042012 Mphosph8Q3TYA6 858 aaKnown RBP10.52□□□□□ -0.72
Sf3b3-201ENSMUST00000042012 Trim27Q62158 513 aa10.52□□□□□ -0.72
Sf3b3-201ENSMUST00000042012 Ift57Q8BXG3 429 aa10.52□□□□□ -0.72
Sf3b3-201ENSMUST00000042012 Krt79Q8VED5 531 aa10.52□□□□□ -0.72
Sf3b3-201ENSMUST00000042012 Brms1Q99N20 246 aa10.52□□□□□ -0.72
Sf3b3-201ENSMUST00000042012 Cfap45Q9D9U9 551 aa10.52□□□□□ -0.72
Sf3b3-201ENSMUST00000042012 DcpsQ9DAR7 338 aa10.52□□□□□ -0.72
Sf3b3-201ENSMUST00000042012 Pik3ap1Q9EQ32 811 aa10.52□□□□□ -0.72
Sf3b3-201ENSMUST00000042012 PtpruB1AUH1 1446 aa10.52□□□□□ -0.72
Sf3b3-201ENSMUST00000042012 Tarbp1E9Q368 1579 aa10.52□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Lbhd1A0A087WPA0 259 aa10.52□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 1700006A11RikB9EHI3 544 aa10.52□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Atp6v0a2P15920 856 aa10.52□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Tgfb2P27090 414 aa10.52□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Adora1Q60612 326 aa10.52□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Kif5bQ61768 963 aa10.52□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Myo3aQ8K3H5 1613 aa10.52□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Nlrp2Q4PLS0 1046 aaKnown RBP10.52□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 GnptabQ69ZN6 1235 aa10.52□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 GancQ8BVW0 898 aa10.52□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 FanclQ9CR14 375 aa10.52□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Ddx10Q80Y44 875 aaKnown RBP10.52□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Znrd1-asQ8R0E5 213 aa10.52□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Dnttip2Q8R2M2 758 aaKnown RBP10.52□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Gja10Q9WUS4 505 aa10.51□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Col1a2Q01149 1372 aa10.51□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Rbm8a2A0A0N4SUH6 174 aa10.51□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Ccdc173A0JLY1 547 aa10.51□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 SlkO54988 1233 aa10.51□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Dpp9Q8BVG4 862 aa10.51□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Rbm8aQ9CWZ3 174 aa10.51□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Prr16A3KMN5 304 aa10.51□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Gcom1E9PZ54 550 aa10.51□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Pde8bE9Q4S1 865 aa10.51□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Gm4340L7N2C4 268 aa10.51□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 MyzapQ3UIJ9 466 aa10.51□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Nsrp1Q5NCR9 542 aa10.51□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Slc13a4Q8BZ82 625 aa10.51□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Fermt2Q8CIB5 680 aa10.51□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Ttc21aQ8C0S4 1314 aa10.51□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Rnaseh1O70338 285 aa10.5□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Chmp6P0C0A3 200 aa10.5□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Hoxd10P28359 340 aa10.5□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Nlrp1aQ2LKU9 1182 aa10.5□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Thrap3Q569Z6 951 aaKnown RBP10.5□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Nup88Q8CEC0 753 aaKnown RBP10.5□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 MthfslL7N466 203 aa10.5□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Cfap52Q5F201 620 aa10.5□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Exoc3Q6KAR6 755 aa10.5□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Sumf1Q8R0F3 372 aa10.5□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Ssr1Q9CY50 286 aaKnown RBP10.5□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Fbxo3Q9DC63 480 aa10.5□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Usp14Q9JMA1 493 aaKnown RBP10.5□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Atp7bQ64446 1462 aa10.5□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Fam186bD3Z420 943 aa10.5□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Flot1O08917 428 aa10.5□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Fermt1P59113 677 aa10.5□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 CoilQ5SU73 570 aa10.5□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Nap1l4Q78ZA7 375 aaKnown RBP10.5□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Sestd1Q80UK0 696 aa10.5□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Kbtbd13Q8C828 458 aa10.5□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Anapc15-psA0A140T8L6 141 aa10.5□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 LdhbP16125 334 aaKnown RBP10.5□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Mdm2P23804 489 aa10.5□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 MsnP26041 577 aaKnown RBP10.5□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Lamc2Q61092 1191 aa10.5□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Ppp1r37Q8BKR5 712 aa10.5□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Knop1Q9Z2Q2 478 aaKnown RBP10.5□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Kif21bQ9QXL1 1668 aa10.49□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Fam178bQ24JP3 464 aa10.49□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Aifm3Q3TY86 605 aa10.49□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Dhx38Q80X98 1228 aa10.49□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Tnpo1Q8BFY9 898 aaKnown RBP10.49□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Mx2Q9WVP9 655 aa10.49□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Lamc1P02468 1607 aaKnown RBP10.49□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Arhgef28P97433 1693 aa10.49□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Myo3bQ1EG27 1305 aa10.49□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Znf653Q6YND2 615 aa10.49□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Mybbp1aQ7TPV4 1344 aaKnown RBP10.49□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Bcs1lQ9CZP5 418 aa10.49□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Neurl4Q5NCX5 1563 aa10.49□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 CemipQ8BI06 1361 aa10.49□□□□□ -0.73
Sf3b3-201ENSMUST00000042012 Nfil3O08750 462 aa10.49□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms