RNA–Protein interactions for RNA: ENSMUST00000036690.6

Ptchd3-201, Transcript of Patched domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptchd3, Length 3,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3-201ENSMUST00000036690 Ms4a1P19437 291 aa13.91□□□□□ -0.18
Ptchd3-201ENSMUST00000036690 Ccdc158Q8CDI6 1109 aa13.91□□□□□ -0.18
Ptchd3-201ENSMUST00000036690 Kcnk13Q8R1P5 405 aa13.91□□□□□ -0.18
Ptchd3-201ENSMUST00000036690 Klc3Q91W40 508 aa13.91□□□□□ -0.18
Ptchd3-201ENSMUST00000036690 Rbm33Q9CXK9 1231 aaKnown RBP13.91□□□□□ -0.18
Ptchd3-201ENSMUST00000036690 Shank2Q80Z38 1476 aa13.91□□□□□ -0.18
Ptchd3-201ENSMUST00000036690 Tbc1d4Q8BYJ6 1307 aa13.9□□□□□ -0.18
Ptchd3-201ENSMUST00000036690 Cyp2d10P24456 504 aa13.9□□□□□ -0.18
Ptchd3-201ENSMUST00000036690 Ankrd23Q812A3 306 aa13.9□□□□□ -0.18
Ptchd3-201ENSMUST00000036690 Hnrnpul1Q8VDM6 859 aaKnown RBP13.9□□□□□ -0.18
Ptchd3-201ENSMUST00000036690 Ehd4Q9EQP2 541 aa13.9□□□□□ -0.18
Ptchd3-201ENSMUST00000036690 Stx1aO35526 288 aa13.9□□□□□ -0.18
Ptchd3-201ENSMUST00000036690 Clec11aO88200 328 aa13.9□□□□□ -0.18
Ptchd3-201ENSMUST00000036690 Zkscan4Q5SZT6 480 aa13.9□□□□□ -0.18
Ptchd3-201ENSMUST00000036690 Ppp1r10Q80W00 888 aaKnown RBP13.9□□□□□ -0.18
Ptchd3-201ENSMUST00000036690 AidaQ8C4Q6 305 aa13.89□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Sos2Q02384 1333 aa13.89□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Pde4dQ01063 747 aa13.89□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Fam170aQ66LM6 333 aa13.89□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Asap2Q7SIG6 958 aa13.89□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Ercc6lQ8BHK9 1240 aa13.89□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Hmg20bQ9Z104 317 aa13.89□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Trim34bJ3QNR8 485 aa13.89□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Tpm1P58771 284 aa13.89□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Atp1a3Q6PIC6 1013 aa13.89□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Tmem266Q8BZB3 538 aa13.88□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Mtmr3Q8K296 1196 aa13.88□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Trim34aQ99PP6 485 aa13.88□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Tiam2Q6ZPF3 1715 aa13.88□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Atp2b1G5E829 1220 aa13.88□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Kcnj4P52189 445 aa13.88□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Irx2P81066 474 aa13.88□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Itga6Q61739 1091 aa13.88□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Dnaaf4Q8R368 420 aa13.88□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Popdc2Q9ES82 367 aa13.88□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Prr5lA2AVJ5 370 aa13.87□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 TsksO54887 585 aa13.87□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Ifit1bl2Q3U687 466 aa13.87□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Pms1Q8K119 917 aa13.87□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Tubb6Q922F4 447 aa13.87□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Ccdc112A0AUP1 442 aa13.87□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Bin2D3Z6Q9 489 aa13.87□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Gpatch3Q8BIY1 525 aa13.87□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Lmod1Q8BVA4 595 aa13.87□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 NgdnQ9DB96 315 aaKnown RBP13.87□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Elf2Q9JHC9 593 aa13.87□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Ank1Q02357 1862 aa13.87□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Hspd1P63038 573 aaKnown RBP13.87□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Limch1Q3UH68 1057 aa13.87□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 L1td1Q587J6 782 aaKnown RBP13.87□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Esco1Q69Z69 843 aa13.87□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Ccer1Q9CQL2 403 aa13.87□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Surf1P09925 306 aa13.86□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Zbtb38Q3LR78 1197 aa13.86□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 AbraQ8BUZ1 375 aa13.86□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Golph3lQ8R088 285 aaKnown RBP13.86□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Ginm1Q91WR6 327 aa13.86□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Odf2lQ9D478 642 aa13.86□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Dusp10Q9ESS0 483 aa13.86□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Mapk8ip1Q9WVI9 707 aa13.86□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Cyp2c23E9Q5K4 494 aa13.86□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Rrp1P56183 494 aaKnown RBP13.86□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Dhx40Q6PE54 779 aaKnown RBP13.86□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Fsd1Q7TPM6 496 aa13.86□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Pram1Q6BCL1 675 aa13.85□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Sgsm1Q8BPQ7 1093 aa13.85□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Rdm1Q9CQK3 281 aa13.85□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Creld2Q9CYA0 350 aa13.85□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Vps33aQ9D2N9 598 aa13.85□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Znf568E9PYI1 671 aa13.85□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Serpinb6bO08804 377 aa13.85□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Q8BZJ8 459 aa13.85□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Gtpbp4Q99ME9 634 aaKnown RBP13.85□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Sept12Q9D451 317 aa13.85□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Clstn1Q9EPL2 979 aa13.85□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 RubcnlQ3TD16 648 aa13.85□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Tmem109Q3UBX0 243 aa13.85□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Susd4Q8BH32 490 aa13.85□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Fam102bQ8BQS4 339 aa13.85□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Emilin1Q99K41 1017 aa13.85□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 TrdnE9Q9K5 693 aa13.84□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Slc5a4bQ91ZP4 660 aa13.84□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Mrpl44Q9CY73 333 aaKnown RBP13.84□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Nlrp9aQ66X03 949 aa13.84□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Cdca8Q8BHX3 289 aa13.84□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Snw1Q9CSN1 536 aaKnown RBP13.84□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Trip6Q9Z1Y4 480 aa13.84□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Ess2O70279 479 aa13.83□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Samsn1P57725 372 aa13.83□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Paxbp1P58501 919 aa13.83□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Pla2g4fQ50L41 855 aa13.83□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Frat2Q8K025 231 aa13.83□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 Ciao1Q99KN2 339 aa13.83□□□□□ -0.19
Ptchd3-201ENSMUST00000036690 XpcP51612 930 aa13.83□□□□□ -0.2
Ptchd3-201ENSMUST00000036690 Anks1aP59672 1150 aa13.83□□□□□ -0.2
Ptchd3-201ENSMUST00000036690 Gm21985Q6P6P5 1106 aa13.83□□□□□ -0.2
Ptchd3-201ENSMUST00000036690 Sptlc3Q8BG54 563 aa13.83□□□□□ -0.2
Ptchd3-201ENSMUST00000036690 Pm20d1Q8C165 503 aa13.83□□□□□ -0.2
Ptchd3-201ENSMUST00000036690 Ulbp1Q8HWA3 334 aa13.83□□□□□ -0.2
Ptchd3-201ENSMUST00000036690 Ddx27Q921N6 760 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms