RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Fam102bQ8BQS4 339 aa15.56■□□□□ 0.08
Nup88-201ENSMUST00000035283 Mrps25Q9D125 171 aaKnown RBP15.56■□□□□ 0.08
Nup88-201ENSMUST00000035283 Acot9Q9R0X4 439 aaKnown RBP15.56■□□□□ 0.08
Nup88-201ENSMUST00000035283 Sall1Q9ER74 1322 aa15.56■□□□□ 0.08
Nup88-201ENSMUST00000035283 Zfp597E9Q6S0 419 aa15.56■□□□□ 0.08
Nup88-201ENSMUST00000035283 Ccng2O08918 344 aa15.56■□□□□ 0.08
Nup88-201ENSMUST00000035283 Pald1P70261 859 aa15.56■□□□□ 0.08
Nup88-201ENSMUST00000035283 Ankle2Q6P1H6 964 aa15.56■□□□□ 0.08
Nup88-201ENSMUST00000035283 Srek1Q8BZX4 494 aaKnown RBP15.56■□□□□ 0.08
Nup88-201ENSMUST00000035283 Phf20l1Q8CCJ9 1013 aa15.56■□□□□ 0.08
Nup88-201ENSMUST00000035283 Kri1Q8VDQ9 704 aaKnown RBP15.56■□□□□ 0.08
Nup88-201ENSMUST00000035283 MbipQ99LQ1 341 aa15.56■□□□□ 0.08
Nup88-201ENSMUST00000035283 Yeats4Q9CR11 227 aaKnown RBP15.56■□□□□ 0.08
Nup88-201ENSMUST00000035283 Rbm33Q9CXK9 1231 aaKnown RBP15.56■□□□□ 0.08
Nup88-201ENSMUST00000035283 Topaz1E5FYH1 1653 aa15.56■□□□□ 0.08
Nup88-201ENSMUST00000035283 Slit1Q80TR4 1531 aa15.55■□□□□ 0.08
Nup88-201ENSMUST00000035283 Kif2aP28740 705 aa15.55■□□□□ 0.08
Nup88-201ENSMUST00000035283 Ccdc102aQ3TMW1 549 aa15.55■□□□□ 0.08
Nup88-201ENSMUST00000035283 Morc2aQ69ZX6 1030 aa15.55■□□□□ 0.08
Nup88-201ENSMUST00000035283 Zbtb40Q6PCS8 1258 aa15.55■□□□□ 0.08
Nup88-201ENSMUST00000035283 Acnat2Q8BGG9 420 aa15.55■□□□□ 0.08
Nup88-201ENSMUST00000035283 Prkag3Q8BGM7 489 aa15.55■□□□□ 0.08
Nup88-201ENSMUST00000035283 Etf1Q8BWY3 437 aaKnown RBP15.55■□□□□ 0.08
Nup88-201ENSMUST00000035283 Vnn1Q9Z0K8 512 aa15.55■□□□□ 0.08
Nup88-201ENSMUST00000035283 Diaph1O08808 1255 aa15.55■□□□□ 0.08
Nup88-201ENSMUST00000035283 Gm28047Q3US59 414 aa15.55■□□□□ 0.08
Nup88-201ENSMUST00000035283 Tmx1Q8VBT0 278 aa15.55■□□□□ 0.08
Nup88-201ENSMUST00000035283 Mtmr6Q8VE11 617 aa15.55■□□□□ 0.08
Nup88-201ENSMUST00000035283 AatfQ9JKX4 526 aaKnown RBP15.55■□□□□ 0.08
Nup88-201ENSMUST00000035283 Cdc45Q9Z1X9 566 aa15.55■□□□□ 0.08
Nup88-201ENSMUST00000035283 Mcm6P97311 821 aa15.54■□□□□ 0.08
Nup88-201ENSMUST00000035283 Uri1Q3TLD5 531 aa15.54■□□□□ 0.08
Nup88-201ENSMUST00000035283 Mkrn3Q60764 544 aa15.54■□□□□ 0.08
Nup88-201ENSMUST00000035283 Trak2Q6P9N8 913 aa15.54■□□□□ 0.08
Nup88-201ENSMUST00000035283 Wdr3Q8BHB4 942 aaKnown RBP15.54■□□□□ 0.08
Nup88-201ENSMUST00000035283 Zmynd15Q8C0R7 736 aa15.54■□□□□ 0.08
Nup88-201ENSMUST00000035283 CerkQ8K4Q7 531 aa15.54■□□□□ 0.08
Nup88-201ENSMUST00000035283 Npc1l1Q6T3U4 1333 aa15.54■□□□□ 0.08
Nup88-201ENSMUST00000035283 Wnk3Q80XP9 1757 aa15.54■□□□□ 0.08
Nup88-201ENSMUST00000035283 CrklP47941 303 aa15.54■□□□□ 0.08
Nup88-201ENSMUST00000035283 Fez2Q6TYB5 348 aa15.54■□□□□ 0.08
Nup88-201ENSMUST00000035283 Cep55Q8BT07 462 aa15.54■□□□□ 0.08
Nup88-201ENSMUST00000035283 Rdm1Q9CQK3 281 aa15.54■□□□□ 0.08
Nup88-201ENSMUST00000035283 Filip1Q9CS72 1211 aa15.54■□□□□ 0.08
Nup88-201ENSMUST00000035283 ChmQ9QXG2 665 aa15.54■□□□□ 0.08
Nup88-201ENSMUST00000035283 Ccdc121E9Q6D3 323 aa15.53■□□□□ 0.08
Nup88-201ENSMUST00000035283 Capn2O08529 700 aa15.53■□□□□ 0.08
Nup88-201ENSMUST00000035283 Rtel1Q0VGM9 1203 aa15.53■□□□□ 0.08
Nup88-201ENSMUST00000035283 Asap2Q7SIG6 958 aa15.53■□□□□ 0.08
Nup88-201ENSMUST00000035283 Lrrc2Q8VDB8 371 aa15.53■□□□□ 0.08
Nup88-201ENSMUST00000035283 Efcab2Q9CQ46 164 aa15.53■□□□□ 0.08
Nup88-201ENSMUST00000035283 TnksQ6PFX9 1320 aa15.53■□□□□ 0.08
Nup88-201ENSMUST00000035283 Col22a1E9Q7P1 1613 aa15.53■□□□□ 0.08
Nup88-201ENSMUST00000035283 Col4a1P02463 1669 aa15.53■□□□□ 0.08
Nup88-201ENSMUST00000035283 Zbtb21E9Q444 1094 aa15.53■□□□□ 0.08
Nup88-201ENSMUST00000035283 GmnnO88513 206 aa15.53■□□□□ 0.08
Nup88-201ENSMUST00000035283 Rec8Q8C5S7 591 aa15.53■□□□□ 0.08
Nup88-201ENSMUST00000035283 Ncoa5Q91W39 579 aaKnown RBP15.53■□□□□ 0.08
Nup88-201ENSMUST00000035283 Pcdhgc5Q91XW9 944 aa15.53■□□□□ 0.08
Nup88-201ENSMUST00000035283 Atp12aQ9Z1W8 1035 aa15.53■□□□□ 0.08
Nup88-201ENSMUST00000035283 AtrnQ9WU60 1428 aa15.52■□□□□ 0.08
Nup88-201ENSMUST00000035283 Eya2O08575 532 aa15.52■□□□□ 0.08
Nup88-201ENSMUST00000035283 Prdm1Q60636 856 aa15.52■□□□□ 0.08
Nup88-201ENSMUST00000035283 Mns1Q61884 491 aa15.52■□□□□ 0.08
Nup88-201ENSMUST00000035283 Tpcn2Q8BWC0 731 aa15.52■□□□□ 0.08
Nup88-201ENSMUST00000035283 Gnl2Q99LH1 728 aaKnown RBP15.52■□□□□ 0.08
Nup88-201ENSMUST00000035283 Ktn1Q61595 1327 aaKnown RBP15.52■□□□□ 0.08
Nup88-201ENSMUST00000035283 Cdc27A2A6Q5 825 aa15.52■□□□□ 0.07
Nup88-201ENSMUST00000035283 Llgl2Q3TJ91 1027 aa15.52■□□□□ 0.07
Nup88-201ENSMUST00000035283 Trim25Q61510 634 aaKnown RBP15.52■□□□□ 0.07
Nup88-201ENSMUST00000035283 Pcdhb14Q6PB90 796 aa15.52■□□□□ 0.07
Nup88-201ENSMUST00000035283 Tmem132aQ922P8 1018 aa15.52■□□□□ 0.07
Nup88-201ENSMUST00000035283 Ankrd1Q9CR42 319 aa15.52■□□□□ 0.07
Nup88-201ENSMUST00000035283 Ltb4r2Q9JJL9 360 aa15.52■□□□□ 0.07
Nup88-201ENSMUST00000035283 Epha2Q03145 977 aa15.51■□□□□ 0.07
Nup88-201ENSMUST00000035283 Igflr1Q3U4N7 345 aa15.51■□□□□ 0.07
Nup88-201ENSMUST00000035283 Sox30Q8CGW4 782 aa15.51■□□□□ 0.07
Nup88-201ENSMUST00000035283 Fam76aQ922G2 307 aa15.51■□□□□ 0.07
Nup88-201ENSMUST00000035283 Tns2Q8CGB6 1400 aa15.51■□□□□ 0.07
Nup88-201ENSMUST00000035283 Gm21698A0A087WQP8 267 aa15.51■□□□□ 0.07
Nup88-201ENSMUST00000035283 Pde4bB1AWC9 736 aa15.51■□□□□ 0.07
Nup88-201ENSMUST00000035283 Gm20425E9Q035 978 aaKnown RBP15.51■□□□□ 0.07
Nup88-201ENSMUST00000035283 Gm21671G3UY31 267 aa15.51■□□□□ 0.07
Nup88-201ENSMUST00000035283 SrprbP47758 269 aa15.51■□□□□ 0.07
Nup88-201ENSMUST00000035283 Gsdma2Q32M21 443 aa15.51■□□□□ 0.07
Nup88-201ENSMUST00000035283 Dpf2Q61103 391 aaKnown RBP15.51■□□□□ 0.07
Nup88-201ENSMUST00000035283 Fsd2Q8BZ52 692 aa15.51■□□□□ 0.07
Nup88-201ENSMUST00000035283 Tmem266Q8BZB3 538 aa15.51■□□□□ 0.07
Nup88-201ENSMUST00000035283 Cwc25Q9DBF7 416 aa15.51■□□□□ 0.07
Nup88-201ENSMUST00000035283 Zranb2Q9R020 330 aaKnown RBP15.51■□□□□ 0.07
Nup88-201ENSMUST00000035283 Tns3Q5SSZ5 1440 aa15.51■□□□□ 0.07
Nup88-201ENSMUST00000035283 GnpatP98192 678 aa15.5■□□□□ 0.07
Nup88-201ENSMUST00000035283 Ddx17Q501J6 650 aaKnown RBP15.5■□□□□ 0.07
Nup88-201ENSMUST00000035283 Col14a1Q80X19 1797 aa15.5■□□□□ 0.07
Nup88-201ENSMUST00000035283 GphnQ8BUV3 769 aaKnown RBP15.5■□□□□ 0.07
Nup88-201ENSMUST00000035283 Q8CEZ4 452 aa15.5■□□□□ 0.07
Nup88-201ENSMUST00000035283 Gigyf1Q99MR1 1044 aaKnown RBP15.5■□□□□ 0.07
Nup88-201ENSMUST00000035283 Stard3nlQ9DCI3 235 aa15.5■□□□□ 0.07
Nup88-201ENSMUST00000035283 Tulp1Q9Z273 543 aa15.5■□□□□ 0.07
Nup88-201ENSMUST00000035283 Nwd2Q6P5U7 1742 aa15.5■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms