RNA–Protein interactions for RNA: ENSMUST00000030439.14

Rnf220-201, Transcript of E3 ubiquitin-protein ligase Rnf220, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Rnf220, Length 3,029 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220-201ENSMUST00000030439 Snw1Q9CSN1 536 aaKnown RBP13.26□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Tpm3P21107 285 aaKnown RBP13.25□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Nbr1P97432 988 aa13.25□□□□□ -0.29
Rnf220-201ENSMUST00000030439 RubcnlQ3TD16 648 aa13.25□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Terf2ipQ91VL8 393 aa13.25□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Rgs9O54828 675 aa13.25□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Prdm1Q60636 856 aa13.25□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Ano10Q8BH79 659 aa13.25□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Dnaaf2Q8BPI1 814 aa13.25□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Sec62Q8BU14 398 aaKnown RBP13.25□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Mtmr3Q8K296 1196 aa13.25□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Stk38Q91VJ4 465 aa13.25□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Abca3Q8R420 1704 aa13.24□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Ift57Q8BXG3 429 aa13.24□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Adam1bQ8R534 806 aa13.24□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Sil1Q9EPK6 465 aa13.24□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Vmn2r23E9PXI5 849 aa13.24□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Gm29094F6Q785 221 aa13.24□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Stx1aO35526 288 aa13.24□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Gas2l3Q3UWW6 683 aa13.24□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Atg9aQ68FE2 551 aa13.24□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Dhx40Q6PE54 779 aaKnown RBP13.24□□□□□ -0.29
Rnf220-201ENSMUST00000030439 MthfsQ9D110 203 aa13.24□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Prl3d3A0A0M6L0J6 224 aa13.23□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Cdk4P30285 303 aa13.23□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Ddx27Q921N6 760 aaKnown RBP13.23□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Col4a3bpQ9EQG9 624 aa13.23□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Myd88P22366 296 aa13.23□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Zkscan4Q5SZT6 480 aa13.23□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Myl10Q62082 202 aa13.23□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Tmx1Q8VBT0 278 aa13.23□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Zscan29E9Q5B4 869 aa13.23□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Clec11aO88200 328 aa13.23□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Samsn1P57725 372 aa13.23□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Zfp397Q7TNK4 527 aa13.23□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Q8BZJ8 459 aa13.23□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Frat2Q8K025 231 aa13.23□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Stard3nlQ9DCI3 235 aa13.23□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Crb1Q8VHS2 1405 aa13.23□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Cfap99A0A140LIX9 648 aa13.22□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Nfatc2ipO09130 412 aa13.22□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Kcnj4P52189 445 aa13.22□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Gtpbp6Q3U6U5 514 aa13.22□□□□□ -0.29
Rnf220-201ENSMUST00000030439 GapdhsQ64467 440 aa13.22□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Ddx58Q6Q899 926 aa13.22□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Luzp1Q8R4U7 1068 aaKnown RBP13.22□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Bmp2kQ91Z96 1138 aa13.22□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Tjp1P39447 1745 aaKnown RBP13.22□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Casz1Q9CWL2 1761 aa13.22□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Ankle2Q6P1H6 964 aa13.22□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Smarcc2Q6PDG5 1213 aa13.22□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Acnat2Q8BGG9 420 aa13.22□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Zcrb1Q9CZ96 217 aaKnown RBP13.22□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Sept12Q9D451 317 aa13.22□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Znf568E9PYI1 671 aa13.21□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Slc4a1P04919 929 aa13.21□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Sh3bp1P55194 680 aa13.21□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Taf3Q5HZG4 932 aa13.21□□□□□ -0.29
Rnf220-201ENSMUST00000030439 GptQ8QZR5 496 aa13.21□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Tmc2Q8R4P4 888 aa13.21□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Krt25Q8VCW2 446 aa13.21□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Xpo4Q9ESJ0 1151 aa13.21□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Elf2Q9JHC9 593 aa13.21□□□□□ -0.29
Rnf220-201ENSMUST00000030439 TnksQ6PFX9 1320 aa13.21□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Dnajc2P54103 621 aaKnown RBP13.21□□□□□ -0.29
Rnf220-201ENSMUST00000030439 LyarQ08288 388 aaKnown RBP13.21□□□□□ -0.29
Rnf220-201ENSMUST00000030439 NfkbibQ60778 359 aa13.21□□□□□ -0.29
Rnf220-201ENSMUST00000030439 BrapQ99MP8 591 aa13.21□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Clstn1Q9EPL2 979 aa13.21□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Ltb4r2Q9JJL9 360 aa13.21□□□□□ -0.29
Rnf220-201ENSMUST00000030439 Usp42B2RQC2 1324 aaKnown RBP13.21□□□□□ -0.3
Rnf220-201ENSMUST00000030439 Klhl34A2AI76 644 aa13.21□□□□□ -0.3
Rnf220-201ENSMUST00000030439 Ccne2Q9Z238 404 aa13.21□□□□□ -0.3
Rnf220-201ENSMUST00000030439 Shank3Q4ACU6 1730 aa13.2□□□□□ -0.3
Rnf220-201ENSMUST00000030439 Dync1i1O88485 628 aa13.2□□□□□ -0.3
Rnf220-201ENSMUST00000030439 Exosc10P56960 887 aaKnown RBP13.2□□□□□ -0.3
Rnf220-201ENSMUST00000030439 Acap3Q6NXL5 833 aa13.2□□□□□ -0.3
Rnf220-201ENSMUST00000030439 Shisa4Q8CA71 197 aa13.2□□□□□ -0.3
Rnf220-201ENSMUST00000030439 DymQ8CHY3 669 aa13.2□□□□□ -0.3
Rnf220-201ENSMUST00000030439 Tubb6Q922F4 447 aa13.2□□□□□ -0.3
Rnf220-201ENSMUST00000030439 Cwc25Q9DBF7 416 aa13.2□□□□□ -0.3
Rnf220-201ENSMUST00000030439 Magi2Q9WVQ1 1275 aa13.2□□□□□ -0.3
Rnf220-201ENSMUST00000030439 TrdnE9Q9K5 693 aa13.2□□□□□ -0.3
Rnf220-201ENSMUST00000030439 Irx2P81066 474 aa13.2□□□□□ -0.3
Rnf220-201ENSMUST00000030439 Zbtb40Q6PCS8 1258 aa13.2□□□□□ -0.3
Rnf220-201ENSMUST00000030439 CtifQ6PEE2 600 aaKnown RBP13.2□□□□□ -0.3
Rnf220-201ENSMUST00000030439 Flad1Q8R123 492 aa13.2□□□□□ -0.3
Rnf220-201ENSMUST00000030439 Lmod1Q8BVA4 595 aa13.19□□□□□ -0.3
Rnf220-201ENSMUST00000030439 ApobrQ8VBT6 942 aa13.19□□□□□ -0.3
Rnf220-201ENSMUST00000030439 Large1Q9Z1M7 756 aa13.19□□□□□ -0.3
Rnf220-201ENSMUST00000030439 Tcof1O08784 1320 aaKnown RBP13.19□□□□□ -0.3
Rnf220-201ENSMUST00000030439 Rrp1P56183 494 aaKnown RBP13.19□□□□□ -0.3
Rnf220-201ENSMUST00000030439 Ercc6lQ8BHK9 1240 aa13.19□□□□□ -0.3
Rnf220-201ENSMUST00000030439 Rps6ka4Q9Z2B9 773 aa13.19□□□□□ -0.3
Rnf220-201ENSMUST00000030439 GakQ99KY4 1305 aa13.19□□□□□ -0.3
Rnf220-201ENSMUST00000030439 Eya2O08575 532 aa13.18□□□□□ -0.3
Rnf220-201ENSMUST00000030439 Cep55Q8BT07 462 aa13.18□□□□□ -0.3
Rnf220-201ENSMUST00000030439 Ints5Q8CHT3 1018 aa13.18□□□□□ -0.3
Rnf220-201ENSMUST00000030439 CenpqQ9CPQ5 267 aa13.18□□□□□ -0.3
Rnf220-201ENSMUST00000030439 Ccnl1Q52KE7 532 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 34.5 ms