RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Nsfl1cQ9CZ44 370 aaKnown RBP18.87■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Hsf2bpQ9D4G2 338 aa18.87■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Kif21bQ9QXL1 1668 aa18.87■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Kif5cP28738 956 aaKnown RBP18.87■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Gbp8Q2V6D6 525 aa18.87■□□□□ 0.61
Col17a1-201ENSMUST00000026045 PrimpolQ6P1E7 537 aa18.87■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Ube2q2Q8K2Z8 378 aa18.87■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Nip7Q9CXK8 180 aaKnown RBP18.87■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Pprc1Q6NZN1 1644 aa18.86■□□□□ 0.61
Col17a1-201ENSMUST00000026045 AU022751B1B0V2 589 aa18.86■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Gm21985Q6P6P5 1106 aa18.86■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Ddx41Q91VN6 622 aaKnown RBP18.86■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Rrbp1Q99PL5 1605 aaKnown RBP18.86■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Zbtb45Q52KG4 520 aa18.86■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Tsr2Q8C8T8 191 aa18.86■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Pde11aP0C1Q2 933 aa18.86■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Larp6Q8BN59 492 aa18.86■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Krt222Q8CCX5 294 aa18.86■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Mmp8O70138 465 aa18.86■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Fhdc1Q3ULZ2 1149 aa18.86■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Sh3gl3Q62421 347 aa18.86■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Micall1Q8BGT6 870 aa18.86■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Zfp853A0A1D5RM95 733 aa18.85■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Metap2O08663 478 aaKnown RBP18.85■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Wdr93Q402B2 695 aa18.85■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Rab3gap1Q80UJ7 981 aa18.85■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Kif2bQ8C0N1 668 aa18.85■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Cetn2Q9R1K9 172 aa18.85■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Pde4dQ01063 747 aa18.85■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Luc7l3Q5SUF2 432 aaKnown RBP18.85■□□□□ 0.61
Col17a1-201ENSMUST00000026045 TchpQ3TVW5 497 aa18.85■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Ctnnbl1Q9CWL8 563 aaKnown RBP18.85■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Uchl5Q9WUP7 329 aa18.85■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Cib2Q9Z309 187 aa18.85■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Mdm2P23804 489 aa18.85■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Ifit1bl2Q3U687 466 aa18.85■□□□□ 0.61
Col17a1-201ENSMUST00000026045 U2af1l4Q8BGJ9 220 aa18.85■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Nlrp4fQ66X05 959 aa18.84■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Tti2Q8BGV4 512 aa18.84■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Sugp2Q8CH09 1067 aa18.84■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Usp11Q99K46 921 aa18.84■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Eif4g3Q80XI3 1579 aaKnown RBP18.84■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Ankrd35E9Q9D8 996 aa18.84■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Trove2O08848 538 aa18.84■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Ifit2Q64112 472 aa18.84■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Fam170aQ66LM6 333 aa18.84■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Tmem266Q8BZB3 538 aa18.84■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Efcab6Q6P1E8 1516 aa18.84■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Ak2Q9WTP6 239 aa18.84■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Gtf3c6Q9D8P7 227 aa18.84■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Mlh1Q9JK91 760 aa18.84■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Map3k4O08648 1597 aa18.84■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Gm44503E9PYU5 387 aa18.84■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Mtus1Q5HZI1 1210 aa18.84■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Ublcp1Q8BGR9 318 aa18.84■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Rnf41Q8BH75 317 aa18.84■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Calml4Q91WQ9 153 aa18.84■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Samd15F6XZJ7 620 aa18.83■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Clec11aO88200 328 aa18.83■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Krt77Q6IFZ6 572 aa18.83■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Hook3Q8BUK6 718 aa18.83■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Spats2lQ91WJ7 558 aaKnown RBP18.83■□□□□ 0.61
Col17a1-201ENSMUST00000026045 AmfrQ9R049 643 aa18.83■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Uso1Q9Z1Z0 959 aaKnown RBP18.83■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Atp8b3Q6UQ17 1335 aa18.83■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Tsg101Q61187 391 aa18.83■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Atp6v0a4Q920R6 833 aa18.83■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Cyp27a1Q9DBG1 533 aa18.83■□□□□ 0.61
Col17a1-201ENSMUST00000026045 ChmQ9QXG2 665 aa18.83■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Nphp3Q7TNH6 1325 aa18.83■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Psmd1Q3TXS7 953 aa18.83■□□□□ 0.6
Col17a1-201ENSMUST00000026045 IqcdQ9D3V1 458 aa18.83■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Pet2A2AHY8 747 aa18.83■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Ampd3O08739 766 aa18.83■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Exoc5Q3TPX4 708 aa18.83■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Ccdc157Q5SPX1 718 aa18.83■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Arhgef6Q8K4I3 771 aa18.83■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Klc4Q9DBS5 619 aa18.83■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Morc4Q8BMD7 928 aa18.82■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Ptcd1Q8C2E4 695 aaKnown RBP18.82■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Apbb1ipQ8R5A3 670 aa18.82■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Dab2P98078 766 aa18.82■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Ano1Q8BHY3 960 aa18.82■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Ppp6r3Q922D4 844 aa18.82■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Krt90E9Q1Z0 538 aa18.82■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Slc30a9Q5IRJ6 567 aa18.82■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Pex19Q8VCI5 299 aa18.82■□□□□ 0.6
Col17a1-201ENSMUST00000026045 EmbP21995 330 aa18.82■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Rad23bP54728 416 aa18.82■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Rbm19Q8R3C6 952 aaKnown RBP18.82■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Zmym3Q9JLM4 1370 aa18.81■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Speer4dL7N216 212 aa18.81■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Camk4P08414 469 aa18.81■□□□□ 0.6
Col17a1-201ENSMUST00000026045 EnahQ03173 802 aa18.81■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Nop53Q8BK35 484 aaKnown RBP18.81■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Ccnl1Q52KE7 532 aaKnown RBP18.81■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Etf1Q8BWY3 437 aaKnown RBP18.81■□□□□ 0.6
Col17a1-201ENSMUST00000026045 SufuQ9Z0P7 484 aa18.81■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Sycp2lA0A0M3U1B0 842 aa18.81■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Cnot6lQ8VEG6 555 aa18.81■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms