RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Q66JV7 365 aa20.46■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Fhod1Q6P9Q4 1197 aa20.46■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Plppr3Q7TPB0 716 aa20.46■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 GckrQ91X44 587 aa20.46■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Dctpp1Q9QY93 170 aa20.46■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Amotl2Q8K371 772 aa20.46■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 SdsQ8VBT2 327 aa20.46■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Erc1Q99MI1 1120 aa20.46■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Ccdc57Q6PHN1 1016 aa20.45■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Exoc3l2D3YUP5 789 aa20.45■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Mdh1P14152 334 aa20.45■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 TxlnaQ6PAM1 554 aaKnown RBP20.45■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 U2af1l4Q8BGJ9 220 aa20.44■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Rec8Q8C5S7 591 aa20.44■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Tmem119Q8R138 280 aa20.44■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Pus3Q9JI38 481 aa20.44■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Ranbp1P34022 203 aaKnown RBP20.44■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Fsd2Q8BZ52 692 aa20.44■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Abcc10Q8R4P9 1501 aa20.44■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Ccdc191J3QQ27 883 aa20.43■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Nkx2-3P97334 362 aa20.43■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Drc7Q6V3W6 876 aa20.43■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Tmem2Q5FWI3 1383 aa20.43■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Idi1P58044 227 aa20.43■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Gm28047Q3US59 414 aa20.43■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Dpf2Q61103 391 aaKnown RBP20.43■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Cdc45Q9Z1X9 566 aa20.43■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Nol10Q5RJG1 687 aaKnown RBP20.42■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Nlrp9bQ66X22 1003 aa20.42■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Adcy2Q80TL1 1090 aa20.42■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Ncaph2Q8BSP2 607 aa20.42■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Alg3Q8K2A8 438 aa20.42■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Acot9Q9R0X4 439 aaKnown RBP20.42■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Pde11aP0C1Q2 933 aa20.42■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Rreb1Q3UH06 1700 aaKnown RBP20.42■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Gas2l3Q3UWW6 683 aa20.42■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Atad2Q8CDM1 1040 aa20.42■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Sh2b1Q91ZM2 756 aa20.42■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Cyp2d34L7N463 504 aa20.41■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 NpeppsQ11011 920 aa20.41■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 SympkQ80X82 1284 aa20.41■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Znf771Q8BJ90 317 aa20.41■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Klhl30Q8C3F7 581 aa20.41■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Nat10Q8K224 1024 aaKnown RBP20.41■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Ccdc12Q8R344 166 aaKnown RBP20.41■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Ccng2O08918 344 aa20.41■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Adora1Q60612 326 aa20.41■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Ddx58Q6Q899 926 aa20.41■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Q8C5K5 320 aa20.41■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Smc1bQ920F6 1248 aa20.41■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 MbipQ99LQ1 341 aa20.41■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Atp12aQ9Z1W8 1035 aa20.41■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 1700017N19RikA0A087WPJ1 469 aa20.4■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Brms1Q99N20 246 aa20.4■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Washc4Q3UMB9 1173 aa20.4■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Ccdc114Q3UX62 658 aa20.4■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Lmbrd2Q8C561 694 aa20.4■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Znhit6Q3UFB2 460 aaKnown RBP20.4■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Tbx2Q60707 711 aa20.4■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Ctr9Q62018 1173 aaKnown RBP20.4■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Atp1a2Q6PIE5 1020 aa20.4■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Cct8l1Q80YT3 562 aa20.4■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Desi2Q9D291 194 aa20.4■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Cbx8Q9QXV1 362 aa20.4■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Slit3Q9WVB4 1523 aa20.4■□□□□ 0.86
Sqstm1-201ENSMUST00000015981 Wnk3Q80XP9 1757 aa20.39■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 Znf326O88291 580 aa20.39■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 Nek5Q7TSC3 627 aa20.39■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 Ppm1mQ8BU27 406 aa20.39■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 Sall1Q9ER74 1322 aa20.39■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 Tmem87bQ8BKU8 555 aa20.39■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 Vnn1Q9Z0K8 512 aa20.39■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 Usp42B2RQC2 1324 aaKnown RBP20.38■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 Col22a1E9Q7P1 1613 aa20.38■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 Cyp2d10P24456 504 aa20.38■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 Myo1bP46735 1107 aa20.38■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 GpkowQ56A08 488 aa20.38■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 Dhx38Q80X98 1228 aa20.38■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 Sycp2lA0A0M3U1B0 842 aa20.38■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 Hspd1P63038 573 aaKnown RBP20.38■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 Ccdc129Q14B48 1034 aa20.38■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 Klra4Q60651 263 aa20.38■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 Dis3l2Q8CI75 870 aaKnown RBP20.38■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 Ccdc83Q9D4V3 305 aa20.38■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 Ankib1Q6ZPS6 1085 aa20.37■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 Epc1Q8C9X6 813 aa20.37■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 PdclQ9DBX2 301 aa20.37■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 Shank2Q80Z38 1476 aa20.37■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 Ric1Q69ZJ7 1422 aa20.37■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 Tbc1d2B1AVH7 922 aa20.37■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 Ercc3P49135 783 aa20.37■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 Evi5P97366 809 aa20.37■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 Map3k11Q80XI6 850 aa20.37■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 Sec62Q8BU14 398 aaKnown RBP20.37■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 Q8C1R3 189 aa20.37■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 Eif2ak3Q9Z2B5 1114 aa20.37■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 Wdr19Q3UGF1 1341 aa20.36■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 Mon2Q80TL7 1715 aa20.36■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 Jakmip3Q5DTN8 844 aa20.36■□□□□ 0.85
Sqstm1-201ENSMUST00000015981 Krt39Q6IFX4 482 aa20.36■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms