RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 IGHV4-31P0DP07 118 aa10□□□□□ -0.81
APOC1-206ENST00000590334 ZNF44P15621 663 aa10□□□□□ -0.81
APOC1-206ENST00000590334 GABRR1P24046 479 aa10□□□□□ -0.81
APOC1-206ENST00000590334 SOX6P35712 828 aa10□□□□□ -0.81
APOC1-206ENST00000590334 OR3A1P47881 315 aa10□□□□□ -0.81
APOC1-206ENST00000590334 SCN1BQ07699 218 aa10□□□□□ -0.81
APOC1-206ENST00000590334 PDCD1Q15116 288 aa10□□□□□ -0.81
APOC1-206ENST00000590334 TMEM249Q2WGJ8 235 aa10□□□□□ -0.81
APOC1-206ENST00000590334 MAPK1IP1LQ8NDC0 245 aa10□□□□□ -0.81
APOC1-206ENST00000590334 OR5D13Q8NGL4 314 aa10□□□□□ -0.81
APOC1-206ENST00000590334 OR5H6Q8NGV6 325 aa10□□□□□ -0.81
APOC1-206ENST00000590334 AP3S1Q92572 193 aa10□□□□□ -0.81
APOC1-206ENST00000590334 SLC25A38Q96DW6 304 aa10□□□□□ -0.81
APOC1-206ENST00000590334 CMTM3Q96MX0 182 aa10□□□□□ -0.81
APOC1-206ENST00000590334 NICN1Q9BSH3 213 aa10□□□□□ -0.81
APOC1-206ENST00000590334 TMUB1Q9BVT8 246 aa10□□□□□ -0.81
APOC1-206ENST00000590334 SLC25A10Q9UBX3 287 aaPredicted RBP10□□□□□ -0.81
APOC1-206ENST00000590334 PPIAL4CA0A0B4J2A2 164 aa9.99□□□□□ -0.81
APOC1-206ENST00000590334 METTL21EPA6NDL7 271 aa9.99□□□□□ -0.81
APOC1-206ENST00000590334 B4DSR2 109 aa9.99□□□□□ -0.81
APOC1-206ENST00000590334 MGST3O14880 152 aa9.99□□□□□ -0.81
APOC1-206ENST00000590334 PDCD6O75340 191 aa9.99□□□□□ -0.81
APOC1-206ENST00000590334 FOXH1O75593 365 aa9.99□□□□□ -0.81
APOC1-206ENST00000590334 ECDO95905 644 aaPredicted RBP9.99□□□□□ -0.81
APOC1-206ENST00000590334 FOSL1P15407 271 aa9.99□□□□□ -0.81
APOC1-206ENST00000590334 FUT3P21217 361 aa9.99□□□□□ -0.81
APOC1-206ENST00000590334 ZFP36P26651 326 aaKnown RBP9.99□□□□□ -0.81
APOC1-206ENST00000590334 CHATP28329 748 aa9.99□□□□□ -0.81
APOC1-206ENST00000590334 ERP29P30040 261 aaKnown RBP9.99□□□□□ -0.81
APOC1-206ENST00000590334 KCNJ3P48549 501 aa9.99□□□□□ -0.81
APOC1-206ENST00000590334 GZMKP49863 264 aa9.99□□□□□ -0.81
APOC1-206ENST00000590334 PAX2Q02962 417 aa9.99□□□□□ -0.81
APOC1-206ENST00000590334 CD276Q5ZPR3 534 aa9.99□□□□□ -0.81
APOC1-206ENST00000590334 FGFRL1Q8N441 504 aa9.99□□□□□ -0.81
APOC1-206ENST00000590334 ASCC1Q8N9N2 400 aaKnown RBP9.99□□□□□ -0.81
APOC1-206ENST00000590334 SUMF2Q8NBJ7 301 aa9.99□□□□□ -0.81
APOC1-206ENST00000590334 LY6G5BQ8NDX9 201 aa9.99□□□□□ -0.81
APOC1-206ENST00000590334 TMEM185AQ8NFB2 350 aa9.99□□□□□ -0.81
APOC1-206ENST00000590334 OR4S1Q8NGB4 309 aa9.99□□□□□ -0.81
APOC1-206ENST00000590334 OR56B1Q8NGI3 324 aa9.99□□□□□ -0.81
APOC1-206ENST00000590334 C8orf46Q8TAG6 207 aa9.99□□□□□ -0.81
APOC1-206ENST00000590334 PPP1R35Q8TAP8 253 aa9.99□□□□□ -0.81
APOC1-206ENST00000590334 DACT3Q96B18 629 aaPredicted RBP9.99□□□□□ -0.81
APOC1-206ENST00000590334 C18orf12Q96KH6 178 aa9.99□□□□□ -0.81
APOC1-206ENST00000590334 DMRTB1Q96MA1 342 aa9.99□□□□□ -0.81
APOC1-206ENST00000590334 NUDT16L1Q9BRJ7 211 aaKnown RBP9.99□□□□□ -0.81
APOC1-206ENST00000590334 DPCDQ9BVM2 203 aaPredicted RBP9.99□□□□□ -0.81
APOC1-206ENST00000590334 SLIRPQ9GZT3 109 aaKnown RBP9.99□□□□□ -0.81
APOC1-206ENST00000590334 NXF2Q9GZY0 626 aaKnown RBP9.99□□□□□ -0.81
APOC1-206ENST00000590334 ABCG5Q9H222 651 aa9.99□□□□□ -0.81
APOC1-206ENST00000590334 RHBDL2Q9NX52 303 aa9.99□□□□□ -0.81
APOC1-206ENST00000590334 HSF4Q9ULV5 492 aa9.99□□□□□ -0.81
APOC1-206ENST00000590334 NOTCH2Q04721 2471 aa9.99□□□□□ -0.81
APOC1-206ENST00000590334 HIVEP1P15822 2718 aa9.98□□□□□ -0.81
APOC1-206ENST00000590334 A0A0A6YYH2 397 aa9.98□□□□□ -0.81
APOC1-206ENST00000590334 A6NJ64 397 aa9.98□□□□□ -0.81
APOC1-206ENST00000590334 RAB27BO00194 218 aa9.98□□□□□ -0.81
APOC1-206ENST00000590334 SOCS1O15524 211 aa9.98□□□□□ -0.81
APOC1-206ENST00000590334 PHF1O43189 567 aaPredicted RBP9.98□□□□□ -0.81
APOC1-206ENST00000590334 SCGNO76038 276 aa9.98□□□□□ -0.81
APOC1-206ENST00000590334 MSMBP08118 114 aa9.98□□□□□ -0.81
APOC1-206ENST00000590334 BLVRBP30043 206 aaPredicted RBP9.98□□□□□ -0.81
APOC1-206ENST00000590334 VEGFCP49767 419 aa9.98□□□□□ -0.81
APOC1-206ENST00000590334 TMEM50BP56557 158 aa9.98□□□□□ -0.81
APOC1-206ENST00000590334 LCN2P80188 198 aa9.98□□□□□ -0.81
APOC1-206ENST00000590334 RBM39Q14498 530 aaKnown RBP9.98□□□□□ -0.81
APOC1-206ENST00000590334 GRK1Q15835 563 aa9.98□□□□□ -0.81
APOC1-206ENST00000590334 PAN3Q58A45 887 aaKnown RBP9.98□□□□□ -0.81
APOC1-206ENST00000590334 UBE2NLQ5JXB2 153 aa9.98□□□□□ -0.81
APOC1-206ENST00000590334 ATAD3CQ5T2N8 411 aa9.98□□□□□ -0.81
APOC1-206ENST00000590334 RAB12Q6IQ22 244 aa9.98□□□□□ -0.81
APOC1-206ENST00000590334 MZT2AQ6P582 158 aa9.98□□□□□ -0.81
APOC1-206ENST00000590334 BTN2A1Q7KYR7 527 aa9.98□□□□□ -0.81
APOC1-206ENST00000590334 LINC01356Q8N9X3 169 aa9.98□□□□□ -0.81
APOC1-206ENST00000590334 RAB40AQ8WXH6 277 aa9.98□□□□□ -0.81
APOC1-206ENST00000590334 ST8SIA4Q92187 359 aa9.98□□□□□ -0.81
APOC1-206ENST00000590334 MSI2Q96DH6 328 aaKnown RBP9.98□□□□□ -0.81
APOC1-206ENST00000590334 DCTN5Q9BTE1 182 aa9.98□□□□□ -0.81
APOC1-206ENST00000590334 CHST6Q9GZX3 395 aa9.98□□□□□ -0.81
APOC1-206ENST00000590334 ATG5Q9H1Y0 275 aa9.98□□□□□ -0.81
APOC1-206ENST00000590334 PPA2Q9H2U2 334 aa9.98□□□□□ -0.81
APOC1-206ENST00000590334 NCOR1P1Q9H4R4 102 aa9.98□□□□□ -0.81
APOC1-206ENST00000590334 RPUSD1Q9UJJ7 312 aaKnown RBP9.98□□□□□ -0.81
APOC1-206ENST00000590334 PEX16Q9Y5Y5 336 aa9.98□□□□□ -0.81
APOC1-206ENST00000590334 A0A075B6Q4 140 aa9.97□□□□□ -0.81
APOC1-206ENST00000590334 LOC105371242A0A075B767 164 aa9.97□□□□□ -0.81
APOC1-206ENST00000590334 TRBV23-1A0A0A0MS06 115 aa9.97□□□□□ -0.81
APOC1-206ENST00000590334 TRAV20A0A0B4J274 112 aa9.97□□□□□ -0.81
APOC1-206ENST00000590334 MCRIP1C9JLW8 97 aa9.97□□□□□ -0.81
APOC1-206ENST00000590334 SMAD7O15105 426 aaKnown RBP9.97□□□□□ -0.81
APOC1-206ENST00000590334 APOA1P02647 267 aa9.97□□□□□ -0.81
APOC1-206ENST00000590334 NDUFB7P17568 137 aa9.97□□□□□ -0.81
APOC1-206ENST00000590334 MEF2CQ06413 473 aaPredicted RBP9.97□□□□□ -0.81
APOC1-206ENST00000590334 KRTAP1-1Q07627 177 aa9.97□□□□□ -0.81
APOC1-206ENST00000590334 MOGAT2Q3SYC2 334 aa9.97□□□□□ -0.81
APOC1-206ENST00000590334 PLAC9Q5JTB6 97 aa9.97□□□□□ -0.81
APOC1-206ENST00000590334 CYB5R2Q6BCY4 276 aa9.97□□□□□ -0.81
APOC1-206ENST00000590334 SLC35E4Q6ICL7 350 aa9.97□□□□□ -0.81
APOC1-206ENST00000590334 METAP1DQ6UB28 335 aaPredicted RBP9.97□□□□□ -0.81
APOC1-206ENST00000590334 GDPD3Q7L5L3 318 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms