RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 NPY4RP50391 375 aa9.33□□□□□ -0.92
TRAPPC8-204ENST00000578252 EFNB2P52799 333 aa9.33□□□□□ -0.92
TRAPPC8-204ENST00000578252 HOXA4Q00056 320 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC8-204ENST00000578252 COL10A1Q03692 680 aa9.33□□□□□ -0.92
TRAPPC8-204ENST00000578252 SCN1BQ07699 218 aa9.33□□□□□ -0.92
TRAPPC8-204ENST00000578252 RBM39Q14498 530 aaKnown RBP9.33□□□□□ -0.92
TRAPPC8-204ENST00000578252 Q6P435 159 aa9.33□□□□□ -0.92
TRAPPC8-204ENST00000578252 CD177Q8N6Q3 437 aa9.33□□□□□ -0.92
TRAPPC8-204ENST00000578252 ASCC1Q8N9N2 400 aaKnown RBP9.33□□□□□ -0.92
TRAPPC8-204ENST00000578252 OR5D13Q8NGL4 314 aa9.33□□□□□ -0.92
TRAPPC8-204ENST00000578252 SLC25A38Q96DW6 304 aa9.33□□□□□ -0.92
TRAPPC8-204ENST00000578252 SNX22Q96L94 193 aa9.33□□□□□ -0.92
TRAPPC8-204ENST00000578252 GAFA1Q96PS6 74 aa9.33□□□□□ -0.92
TRAPPC8-204ENST00000578252 CCL13Q99616 98 aa9.33□□□□□ -0.92
TRAPPC8-204ENST00000578252 RCC2Q9P258 522 aaKnown RBP9.33□□□□□ -0.92
TRAPPC8-204ENST00000578252 HSF4Q9ULV5 492 aa9.33□□□□□ -0.92
TRAPPC8-204ENST00000578252 PEX16Q9Y5Y5 336 aa9.33□□□□□ -0.92
TRAPPC8-204ENST00000578252 FUOMA2VDF0 154 aa9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 FAM25AB3EWG3 89 aa9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 FAM25CB3EWG5 89 aa9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 FAM25GB3EWG6 89 aa9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 MCRIP1C9JLW8 97 aa9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 SIRPB1O00241 398 aa9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 SLC33A1O00400 549 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 NDUFB3O43676 98 aa9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 HPGDSO60760 199 aa9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 TPPPO94811 219 aa9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 IGHV2-5P01817 119 aa9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 CSN2P05814 226 aa9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 USF1P22415 310 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 CHATP28329 748 aa9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 BLVRBP30043 206 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 TALDO1P37837 337 aa9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 RBMXP38159 391 aaKnown RBP9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 CEBPDP49716 269 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 VEGFCP49767 419 aa9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 PLA2G7Q13093 441 aa9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 PAN3Q58A45 887 aaKnown RBP9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 LRRC10Q5BKY1 277 aa9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 ATAD3CQ5T2N8 411 aa9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 LINC00299Q6ZSB3 139 aa9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 CMTM4Q8IZR5 234 aa9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 OR8H2Q8N162 312 aa9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 OR10R2Q8NGX6 335 aa9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 CLDND2Q8NHS1 167 aa9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 RAB3CQ96E17 227 aa9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 NICN1Q9BSH3 213 aa9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 RABL2AQ9UBK7 228 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 RABL2BQ9UNT1 228 aa9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 CCDC168Q8NDH2 2452 aa9.32□□□□□ -0.92
TRAPPC8-204ENST00000578252 PRRC2AP48634 2157 aaKnown RBP9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 SETXQ7Z333 2677 aaKnown RBP9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 A0A0A6YYD4 124 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 TRAV24A0A0B4J272 114 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 FOXI3A8MTJ6 420 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 H7C1Q1 480 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 K7N7A8 449 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 RAB27BO00194 218 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 MGST3O14880 152 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 SOCS1O15524 211 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 XRCC3O43542 346 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 ZNF737O75373 536 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 CA11O75493 328 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 CLPXO76031 633 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 TK1P04183 234 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 WNT2P09544 360 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 ELK1P19419 428 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 AMY2BP19961 511 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 PAX5Q02548 391 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 LOXL1Q08397 574 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 ESCO2Q56NI9 601 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 LYPD2Q6UXB3 125 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 BAIAP2L2Q6UXY1 529 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 C17orf107Q6ZR85 190 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 Q6ZTK2 550 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 GDPD3Q7L5L3 318 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 KRTAP1-3Q8IUG1 177 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 FAM216BQ8N7L0 139 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 SUMF2Q8NBJ7 301 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 TMEM185AQ8NFB2 350 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 NEK7Q8TDX7 302 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 C15orf40Q8WUR7 153 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 WFDC12Q8WWY7 111 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 Q96MF0 132 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 WDFY2Q96P53 400 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 DPCDQ9BVM2 203 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 MIXL1Q9H2W2 232 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 PLEKHJ1Q9NW61 149 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 CTSZQ9UBR2 303 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 SLC25A10Q9UBX3 287 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 CLN8Q9UBY8 286 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 MAB21L2Q9Y586 359 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 NOTCH2Q04721 2471 aa9.31□□□□□ -0.92
TRAPPC8-204ENST00000578252 IGHV4-61A0A0C4DH41 118 aa9.3□□□□□ -0.92
TRAPPC8-204ENST00000578252 TMEM82A0PJX8 343 aa9.3□□□□□ -0.92
TRAPPC8-204ENST00000578252 SERPINE3A8MV23 424 aa9.3□□□□□ -0.92
TRAPPC8-204ENST00000578252 CTDSP2O14595 271 aa9.3□□□□□ -0.92
TRAPPC8-204ENST00000578252 DVL1O14640 695 aa9.3□□□□□ -0.92
TRAPPC8-204ENST00000578252 PSPNO60542 156 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms