RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 PID1Q7Z2X4 250 aa2.96□□□□□ -1.94
CKS1BP1-201ENST00000555221 CA13Q8N1Q1 262 aa2.96□□□□□ -1.94
CKS1BP1-201ENST00000555221 STK40Q8N2I9 435 aa2.96□□□□□ -1.94
CKS1BP1-201ENST00000555221 NDNFQ8TB73 568 aa2.96□□□□□ -1.94
CKS1BP1-201ENST00000555221 NT5CQ8TCD5 201 aa2.96□□□□□ -1.94
CKS1BP1-201ENST00000555221 RHOXF2Q9BQY4 288 aa2.96□□□□□ -1.94
CKS1BP1-201ENST00000555221 ANKHQ9HCJ1 492 aa2.96□□□□□ -1.94
CKS1BP1-201ENST00000555221 RANBP2P49792 3224 aaKnown RBP2.95□□□□□ -1.94
CKS1BP1-201ENST00000555221 FLNBO75369 2602 aaKnown RBP2.95□□□□□ -1.94
CKS1BP1-201ENST00000555221 PAPPA2Q9BXP8 1791 aa2.95□□□□□ -1.94
CKS1BP1-201ENST00000555221 TRAV8-7A0A075B6U6 113 aa2.95□□□□□ -1.94
CKS1BP1-201ENST00000555221 NDUFS5O43920 106 aa2.95□□□□□ -1.94
CKS1BP1-201ENST00000555221 CCDC172P0C7W6 258 aa2.95□□□□□ -1.94
CKS1BP1-201ENST00000555221 HLA-GP17693 338 aa2.95□□□□□ -1.94
CKS1BP1-201ENST00000555221 CD9P21926 228 aa2.95□□□□□ -1.94
CKS1BP1-201ENST00000555221 PAX6P26367 422 aa2.95□□□□□ -1.94
CKS1BP1-201ENST00000555221 ELF3P78545 371 aaPredicted RBP2.95□□□□□ -1.94
CKS1BP1-201ENST00000555221 TOMM34Q15785 309 aaPredicted RBP2.95□□□□□ -1.94
CKS1BP1-201ENST00000555221 TTC32Q5I0X7 151 aa2.95□□□□□ -1.94
CKS1BP1-201ENST00000555221 C6orf183Q5T699 404 aa2.95□□□□□ -1.94
CKS1BP1-201ENST00000555221 MORN3Q6PF18 240 aaPredicted RBP2.95□□□□□ -1.94
CKS1BP1-201ENST00000555221 EPGNQ6UW88 154 aa2.95□□□□□ -1.94
CKS1BP1-201ENST00000555221 BBS7Q8IWZ6 715 aa2.95□□□□□ -1.94
CKS1BP1-201ENST00000555221 ZCCHC24Q8N2G6 241 aaKnown RBP2.95□□□□□ -1.94
CKS1BP1-201ENST00000555221 HGDQ93099 445 aa2.95□□□□□ -1.94
CKS1BP1-201ENST00000555221 C20orf144Q9BQM9 153 aa2.95□□□□□ -1.94
CKS1BP1-201ENST00000555221 LCE3DQ9BYE3 92 aa2.95□□□□□ -1.94
CKS1BP1-201ENST00000555221 CHRNA10Q9GZZ6 450 aa2.95□□□□□ -1.94
CKS1BP1-201ENST00000555221 RAB22AQ9UL26 194 aa2.95□□□□□ -1.94
CKS1BP1-201ENST00000555221 AP3M1Q9Y2T2 418 aa2.95□□□□□ -1.94
CKS1BP1-201ENST00000555221 ORC6Q9Y5N6 252 aa2.95□□□□□ -1.94
CKS1BP1-201ENST00000555221 WIF1Q9Y5W5 379 aa2.95□□□□□ -1.94
CKS1BP1-201ENST00000555221 COL1A2P08123 1366 aa2.95□□□□□ -1.94
CKS1BP1-201ENST00000555221 ROBO3Q96MS0 1386 aa2.95□□□□□ -1.94
CKS1BP1-201ENST00000555221 AK9Q5TCS8 1911 aa2.95□□□□□ -1.94
CKS1BP1-201ENST00000555221 TRIOBPQ9H2D6 2365 aa2.95□□□□□ -1.94
CKS1BP1-201ENST00000555221 COL4A5P29400 1685 aa2.95□□□□□ -1.94
CKS1BP1-201ENST00000555221 COL4A4P53420 1690 aaPredicted RBP2.95□□□□□ -1.94
CKS1BP1-201ENST00000555221 ABCB11O95342 1321 aa2.94□□□□□ -1.94
CKS1BP1-201ENST00000555221 MKI67P46013 3256 aaKnown RBP2.94□□□□□ -1.94
CKS1BP1-201ENST00000555221 SPEF2Q9C093 1822 aa2.94□□□□□ -1.94
CKS1BP1-201ENST00000555221 EPG5Q9HCE0 2579 aa2.94□□□□□ -1.94
CKS1BP1-201ENST00000555221 IGKV1D-17A0A075B6S4 117 aa2.94□□□□□ -1.94
CKS1BP1-201ENST00000555221 LOC102724200A0A096LPH7 203 aaPredicted RBP2.94□□□□□ -1.94
CKS1BP1-201ENST00000555221 A0A0D9SFI3 127 aa2.94□□□□□ -1.94
CKS1BP1-201ENST00000555221 K7EM74 188 aa2.94□□□□□ -1.94
CKS1BP1-201ENST00000555221 M0R1B8 84 aa2.94□□□□□ -1.94
CKS1BP1-201ENST00000555221 ZNF593O00488 134 aaPredicted RBP2.94□□□□□ -1.94
CKS1BP1-201ENST00000555221 SPOPO43791 374 aa2.94□□□□□ -1.94
CKS1BP1-201ENST00000555221 S100A9P06702 114 aaKnown RBP2.94□□□□□ -1.94
CKS1BP1-201ENST00000555221 OR4Q2P0C623 313 aa2.94□□□□□ -1.94
CKS1BP1-201ENST00000555221 CD28P10747 220 aa2.94□□□□□ -1.94
CKS1BP1-201ENST00000555221 DEKP35659 375 aaKnown RBP2.94□□□□□ -1.94
CKS1BP1-201ENST00000555221 RGS6P49758 472 aa2.94□□□□□ -1.94
CKS1BP1-201ENST00000555221 IDNKQ5T6J7 187 aa2.94□□□□□ -1.94
CKS1BP1-201ENST00000555221 SYT6Q5T7P8 510 aaPredicted RBP2.94□□□□□ -1.94
CKS1BP1-201ENST00000555221 SETD3Q86TU7 594 aaPredicted RBP2.94□□□□□ -1.94
CKS1BP1-201ENST00000555221 SLC26A10Q8NG04 563 aa2.94□□□□□ -1.94
CKS1BP1-201ENST00000555221 OR2M7Q8NG81 312 aa2.94□□□□□ -1.94
CKS1BP1-201ENST00000555221 ORAOV1Q8WV07 137 aa2.94□□□□□ -1.94
CKS1BP1-201ENST00000555221 UTP23Q9BRU9 249 aaKnown RBP2.94□□□□□ -1.94
CKS1BP1-201ENST00000555221 TMED9Q9BVK6 235 aa2.94□□□□□ -1.94
CKS1BP1-201ENST00000555221 SYT4Q9H2B2 425 aa2.94□□□□□ -1.94
CKS1BP1-201ENST00000555221 VAPAQ9P0L0 249 aa2.94□□□□□ -1.94
CKS1BP1-201ENST00000555221 Q9Y3F1 56 aa2.94□□□□□ -1.94
CKS1BP1-201ENST00000555221 PLIN4Q96Q06 1357 aa2.94□□□□□ -1.94
CKS1BP1-201ENST00000555221 SCN9AQ15858 1988 aa2.94□□□□□ -1.94
CKS1BP1-201ENST00000555221 BRCA2P51587 3418 aa2.94□□□□□ -1.94
CKS1BP1-201ENST00000555221 SYNRGQ9UMZ2 1314 aa2.93□□□□□ -1.94
CKS1BP1-201ENST00000555221 TIAM2Q8IVF5 1701 aa2.93□□□□□ -1.94
CKS1BP1-201ENST00000555221 MYH2Q9UKX2 1941 aa2.93□□□□□ -1.94
CKS1BP1-201ENST00000555221 CACNA1SQ13698 1873 aa2.93□□□□□ -1.94
CKS1BP1-201ENST00000555221 TRPM7Q96QT4 1865 aa2.93□□□□□ -1.94
CKS1BP1-201ENST00000555221 NDUFS8O00217 210 aa2.93□□□□□ -1.94
CKS1BP1-201ENST00000555221 MFNGO00587 321 aa2.93□□□□□ -1.94
CKS1BP1-201ENST00000555221 TCAPO15273 167 aa2.93□□□□□ -1.94
CKS1BP1-201ENST00000555221 VAPBO95292 243 aa2.93□□□□□ -1.94
CKS1BP1-201ENST00000555221 IGKV1-17P01599 117 aa2.93□□□□□ -1.94
CKS1BP1-201ENST00000555221 BGNP21810 368 aa2.93□□□□□ -1.94
CKS1BP1-201ENST00000555221 C16orf47Q6ZP98 133 aaPredicted RBP2.93□□□□□ -1.94
CKS1BP1-201ENST00000555221 PDPNQ86YL7 162 aa2.93□□□□□ -1.94
CKS1BP1-201ENST00000555221 SYS1Q8N2H4 156 aa2.93□□□□□ -1.94
CKS1BP1-201ENST00000555221 OR6K2Q8NGY2 324 aa2.93□□□□□ -1.94
CKS1BP1-201ENST00000555221 GLT1D1Q96MS3 346 aa2.93□□□□□ -1.94
CKS1BP1-201ENST00000555221 PDCD1LG2Q9BQ51 273 aa2.93□□□□□ -1.94
CKS1BP1-201ENST00000555221 SPZ1Q9BXG8 430 aa2.93□□□□□ -1.94
CKS1BP1-201ENST00000555221 MRPL20Q9BYC9 149 aaKnown RBP2.93□□□□□ -1.94
CKS1BP1-201ENST00000555221 PSTPIP2Q9H939 334 aa2.93□□□□□ -1.94
CKS1BP1-201ENST00000555221 PRO0628Q9UI54 55 aa2.93□□□□□ -1.94
CKS1BP1-201ENST00000555221 RWDD2AQ9UIY3 292 aa2.93□□□□□ -1.94
CKS1BP1-201ENST00000555221 ACOT9Q9Y305 439 aa2.93□□□□□ -1.94
CKS1BP1-201ENST00000555221 CACNA1BQ00975 2339 aa2.93□□□□□ -1.94
CKS1BP1-201ENST00000555221 PSME4Q14997 1843 aa2.93□□□□□ -1.94
CKS1BP1-201ENST00000555221 ADAMTSL1Q8N6G6 1762 aa2.92□□□□□ -1.94
CKS1BP1-201ENST00000555221 DEXIO95424 95 aa2.92□□□□□ -1.94
CKS1BP1-201ENST00000555221 CD5P06127 495 aa2.92□□□□□ -1.94
CKS1BP1-201ENST00000555221 CCNOP22674 350 aa2.92□□□□□ -1.94
CKS1BP1-201ENST00000555221 GPR4P46093 362 aa2.92□□□□□ -1.94
CKS1BP1-201ENST00000555221 GDI2P50395 445 aaKnown RBP2.92□□□□□ -1.94
CKS1BP1-201ENST00000555221 OR12D2P58182 307 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms