RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 NUDT16L1Q9BRJ7 211 aaKnown RBP13.65□□□□□ -0.22
SPTLC2-203ENST00000554901 SHARPINQ9H0F6 387 aa13.65□□□□□ -0.22
SPTLC2-203ENST00000554901 ABCG5Q9H222 651 aa13.65□□□□□ -0.22
SPTLC2-203ENST00000554901 METRNQ9UJH8 293 aa13.65□□□□□ -0.22
SPTLC2-203ENST00000554901 A0A075B6Q4 140 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 TRBV23-1A0A0A0MS06 115 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 PPIAL4CA0A0B4J2A2 164 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 A0A1B0GW55 424 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 FUOMA2VDF0 154 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 DUX4L2P0CJ85 424 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 DUX4L3P0CJ86 424 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 DUX4L4P0CJ87 422 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 DUX4L5P0CJ88 424 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 DUX4L6P0CJ89 424 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 DUX4L7P0CJ90 424 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 CHATP28329 748 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 ERP29P30040 261 aaKnown RBP13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 BLVRBP30043 206 aaPredicted RBP13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 OR3A1P47881 315 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 EFNB2P52799 333 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 ARL6IP1Q15041 203 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 GRK1Q15835 563 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 MALRD1Q5VYJ5 2156 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 FOXB2Q5VYV0 432 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 SIGIRRQ6IA17 410 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 DUX4L9Q6RFH8 374 aaPredicted RBP13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 SUMF2Q8NBJ7 301 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 OR5H6Q8NGV6 325 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 NICN1Q9BSH3 213 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 DPCDQ9BVM2 203 aaPredicted RBP13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 SLIRPQ9GZT3 109 aaKnown RBP13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 DUX4Q9UBX2 424 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 HSF4Q9ULV5 492 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 A3GALT2U3KPV4 340 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 A0A0A6YYD4 124 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 FOXI3A8MTJ6 420 aaPredicted RBP13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 MCRIP1C9JLW8 97 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 CA11O75493 328 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 TFF1P04155 84 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 SELLP14151 372 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 FOSL1P15407 271 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 VEGFCP49767 419 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 SEC61A1P61619 476 aaKnown RBP13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 PLA2G7Q13093 441 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 PDCD1Q15116 288 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 UBE2NLQ5JXB2 153 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 ATAD3CQ5T2N8 411 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 GDPD3Q7L5L3 318 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 LINC01356Q8N9X3 169 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 ST8SIA4Q92187 359 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 SLC25A38Q96DW6 304 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 C18orf12Q96KH6 178 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 ATG5Q9H1Y0 275 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 NCOR1P1Q9H4R4 102 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 LPAR3Q9UBY5 353 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 PEX16Q9Y5Y5 336 aa13.64□□□□□ -0.23
SPTLC2-203ENST00000554901 VPS13CQ709C8 3753 aa13.63□□□□□ -0.23
SPTLC2-203ENST00000554901 MAST4O15021 2626 aa13.63□□□□□ -0.23
SPTLC2-203ENST00000554901 AKAP9Q99996 3911 aa13.63□□□□□ -0.23
SPTLC2-203ENST00000554901 KIAA1324LA8MWY0 1029 aaPredicted RBP13.63□□□□□ -0.23
SPTLC2-203ENST00000554901 FAM157AC9JC47 383 aa13.63□□□□□ -0.23
SPTLC2-203ENST00000554901 RAB27BO00194 218 aa13.63□□□□□ -0.23
SPTLC2-203ENST00000554901 FCN3O75636 299 aa13.63□□□□□ -0.23
SPTLC2-203ENST00000554901 APOA1P02647 267 aa13.63□□□□□ -0.23
SPTLC2-203ENST00000554901 MSMBP08118 114 aa13.63□□□□□ -0.23
SPTLC2-203ENST00000554901 NDUFB7P17568 137 aa13.63□□□□□ -0.23
SPTLC2-203ENST00000554901 CIARTQ8N365 385 aaPredicted RBP13.63□□□□□ -0.23
SPTLC2-203ENST00000554901 SAMD12Q8N8I0 201 aa13.63□□□□□ -0.23
SPTLC2-203ENST00000554901 OR4S1Q8NGB4 309 aa13.63□□□□□ -0.23
SPTLC2-203ENST00000554901 OR10R2Q8NGX6 335 aa13.63□□□□□ -0.23
SPTLC2-203ENST00000554901 C8orf46Q8TAG6 207 aa13.63□□□□□ -0.23
SPTLC2-203ENST00000554901 PHF21AQ96BD5 680 aa13.63□□□□□ -0.23
SPTLC2-203ENST00000554901 NXF2Q9GZY0 626 aaKnown RBP13.63□□□□□ -0.23
SPTLC2-203ENST00000554901 PPA2Q9H2U2 334 aa13.63□□□□□ -0.23
SPTLC2-203ENST00000554901 COMMD3Q9UBI1 195 aa13.63□□□□□ -0.23
SPTLC2-203ENST00000554901 LOC105371242A0A075B767 164 aa13.62□□□□□ -0.23
SPTLC2-203ENST00000554901 SOCS1O15524 211 aa13.62□□□□□ -0.23
SPTLC2-203ENST00000554901 LIPFP07098 398 aa13.62□□□□□ -0.23
SPTLC2-203ENST00000554901 GATA3P23771 443 aa13.62□□□□□ -0.23
SPTLC2-203ENST00000554901 TMEM50BP56557 158 aa13.62□□□□□ -0.23
SPTLC2-203ENST00000554901 MEF2CQ06413 473 aaPredicted RBP13.62□□□□□ -0.23
SPTLC2-203ENST00000554901 Q6ZTK2 550 aa13.62□□□□□ -0.23
SPTLC2-203ENST00000554901 BTN2A1Q7KYR7 527 aa13.62□□□□□ -0.23
SPTLC2-203ENST00000554901 RAB3CQ96E17 227 aa13.62□□□□□ -0.23
SPTLC2-203ENST00000554901 S100A16Q96FQ6 103 aaKnown RBP13.62□□□□□ -0.23
SPTLC2-203ENST00000554901 DCTN5Q9BTE1 182 aa13.62□□□□□ -0.23
SPTLC2-203ENST00000554901 DCUN1D5Q9BTE7 237 aa13.62□□□□□ -0.23
SPTLC2-203ENST00000554901 CHST6Q9GZX3 395 aa13.62□□□□□ -0.23
SPTLC2-203ENST00000554901 DIABLOQ9NR28 239 aa13.62□□□□□ -0.23
SPTLC2-203ENST00000554901 PLEKHJ1Q9NW61 149 aa13.62□□□□□ -0.23
SPTLC2-203ENST00000554901 MED13LQ71F56 2210 aa13.62□□□□□ -0.23
SPTLC2-203ENST00000554901 TRAV20A0A0B4J274 112 aa13.61□□□□□ -0.23
SPTLC2-203ENST00000554901 POM121CA8CG34 1229 aa13.61□□□□□ -0.23
SPTLC2-203ENST00000554901 PHF1O43189 567 aaPredicted RBP13.61□□□□□ -0.23
SPTLC2-203ENST00000554901 ENSAO43768 121 aaKnown RBP13.61□□□□□ -0.23
SPTLC2-203ENST00000554901 IGHV4-31P0DP07 118 aa13.61□□□□□ -0.23
SPTLC2-203ENST00000554901 ZFP36P26651 326 aaKnown RBP13.61□□□□□ -0.23
SPTLC2-203ENST00000554901 P2RX3P56373 397 aa13.61□□□□□ -0.23
SPTLC2-203ENST00000554901 CYB5R2Q6BCY4 276 aa13.61□□□□□ -0.23
SPTLC2-203ENST00000554901 MAPK1IP1LQ8NDC0 245 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms