RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 A0A1W2PRF3 423 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 A0A1W2PRM7 423 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 CIB4A0PJX0 185 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 IGSF23A1L1A6 192 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 F8W735 103 aaPredicted RBP2.31□□□□□ -2.04
PRPF39-206ENST00000554429 GFYI3L273 518 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 K7ERU9 68 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 M0R143 59 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 GNGT2O14610 69 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 FFAR3O14843 346 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 GPR42O15529 346 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 CDC14BO60729 498 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 MRPS14O60783 128 aaKnown RBP2.31□□□□□ -2.04
PRPF39-206ENST00000554429 NEURL1O76050 574 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 SP1P08047 785 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 LIMS3P0CW19 117 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 LIMS4P0CW20 117 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 PPIAL4GP0DN37 164 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 PSMB9P28065 219 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 CMPK1P30085 196 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 ZNF133P52736 654 aaPredicted RBP2.31□□□□□ -2.04
PRPF39-206ENST00000554429 CLDN20P56880 219 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 RAB25P57735 213 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 SNRPEP62304 92 aaKnown RBP2.31□□□□□ -2.04
PRPF39-206ENST00000554429 MRPS34P82930 218 aaKnown RBP2.31□□□□□ -2.04
PRPF39-206ENST00000554429 IFITM3Q01628 133 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 PAX2Q02962 417 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 PRDX1Q06830 199 aaKnown RBP2.31□□□□□ -2.04
PRPF39-206ENST00000554429 GAB1Q13480 694 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 KIR3DS1Q14943 382 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 TSNQ15631 228 aaKnown RBP2.31□□□□□ -2.04
PRPF39-206ENST00000554429 C4orf26Q17RF5 130 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 TBC1D28Q2M2D7 210 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 VMACQ2NL98 169 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 SLC25A35Q3KQZ1 300 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 FAM174BQ3ZCQ3 159 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 PHLDA2Q53GA4 152 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 TMEM128Q5BJH2 165 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 C1orf189Q5VU69 101 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 EPGNQ6UW88 154 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 UNQ6126/PRO20091Q6UXV3 157 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 CHMP1BQ7LBR1 199 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 OR2W3Q7Z3T1 314 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 COMMD2Q86X83 199 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 DOLPP1Q86YN1 238 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 LYG1Q8N1E2 194 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 Q8N1Y9 231 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 ZFP62Q8NB50 900 aaPredicted RBP2.31□□□□□ -2.04
PRPF39-206ENST00000554429 NFAM1Q8NET5 270 aaPredicted RBP2.31□□□□□ -2.04
PRPF39-206ENST00000554429 KBTBD8Q8NFY9 601 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 RDH11Q8TC12 318 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 Q8WTZ3 238 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 RORBQ92753 470 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 CTHRC1Q96CG8 243 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 PIK3IP1Q96FE7 263 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 WDYHV1Q96HA8 205 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 REEP6Q96HR9 211 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 TSSK2Q96PF2 358 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 CSF3RQ99062 836 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 PRO1933Q9H354 126 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 TUBB1Q9H4B7 451 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 ZDHHC11Q9H8X9 412 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 EFCAB1Q9HAE3 211 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 CDH20Q9HBT6 801 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 FGF20Q9NP95 211 aaPredicted RBP2.31□□□□□ -2.04
PRPF39-206ENST00000554429 HINT3Q9NQE9 182 aaKnown RBP2.31□□□□□ -2.04
PRPF39-206ENST00000554429 ACOXLQ9NUZ1 547 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 BFARQ9NZS9 450 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 FRRS1LQ9P0K9 344 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 RCC2Q9P258 522 aaKnown RBP2.31□□□□□ -2.04
PRPF39-206ENST00000554429 ASF1AQ9Y294 204 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 NCKAP5O14513 1909 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 A0A087WUJ7 227 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 CCDC182A6NF36 153 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 FAM159BA6NKW6 160 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 H0YGG7 62 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 TRAPPC2LH3BP13 241 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 NME4O00746 187 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 UBFD1O14562 309 aaKnown RBP2.31□□□□□ -2.04
PRPF39-206ENST00000554429 MPDU1O75352 247 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 ATP5LO75964 103 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 ZNF205O95201 554 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 CDS2O95674 445 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 CD99P14209 185 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 CELP19835 753 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 RAB3BP20337 219 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 GATA3P23771 443 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 PTGER1P34995 402 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 GLRXP35754 106 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 PIGAP37287 484 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 CD96P40200 585 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 CRYBB2P43320 205 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 OR3A4PP47883 348 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 P2RY1P47900 373 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 GAS1P54826 345 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 XGP55808 180 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 DEFA1P59665 94 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 CDK5Q00535 292 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 HSF1Q00613 529 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 KIAA0141Q14154 515 aaPredicted RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms