RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 NFYBP25208 207 aa7.13□□□□□ -1.27
SYNE2-209ENST00000553308 CDC42P60953 191 aa7.13□□□□□ -1.27
SYNE2-209ENST00000553308 ACTR3P61158 418 aa7.13□□□□□ -1.27
SYNE2-209ENST00000553308 TRIM25Q14258 630 aaKnown RBP7.13□□□□□ -1.27
SYNE2-209ENST00000553308 ATXN7L3Q14CW9 347 aaPredicted RBP7.13□□□□□ -1.27
SYNE2-209ENST00000553308 CATSPERDQ86XM0 798 aa7.13□□□□□ -1.27
SYNE2-209ENST00000553308 FOXRED2Q8IWF2 684 aa7.13□□□□□ -1.27
SYNE2-209ENST00000553308 ADGRG5Q8IZF4 528 aa7.13□□□□□ -1.27
SYNE2-209ENST00000553308 YIPF7Q8N8F6 280 aa7.13□□□□□ -1.27
SYNE2-209ENST00000553308 OR8U1Q8NH10 309 aa7.13□□□□□ -1.27
SYNE2-209ENST00000553308 OR9G1Q8NH87 305 aa7.13□□□□□ -1.27
SYNE2-209ENST00000553308 LEAP2Q969E1 77 aa7.13□□□□□ -1.27
SYNE2-209ENST00000553308 RFT1Q96AA3 541 aa7.13□□□□□ -1.27
SYNE2-209ENST00000553308 KIRREL1Q96J84 757 aa7.13□□□□□ -1.27
SYNE2-209ENST00000553308 TEX12Q9BXU0 123 aa7.13□□□□□ -1.27
SYNE2-209ENST00000553308 PPIL3Q9H2H8 161 aaKnown RBP7.13□□□□□ -1.27
SYNE2-209ENST00000553308 DCLRE1BQ9H816 532 aa7.13□□□□□ -1.27
SYNE2-209ENST00000553308 HMG20AQ9NP66 347 aa7.13□□□□□ -1.27
SYNE2-209ENST00000553308 CLN6Q9NWW5 311 aa7.13□□□□□ -1.27
SYNE2-209ENST00000553308 ZNF256Q9Y2P7 627 aaPredicted RBP7.13□□□□□ -1.27
SYNE2-209ENST00000553308 KIAA2026Q5HYC2 2103 aa7.13□□□□□ -1.27
SYNE2-209ENST00000553308 STAB2Q8WWQ8 2551 aa7.12□□□□□ -1.27
SYNE2-209ENST00000553308 LOC107986453A0A1B0GWG9 222 aa7.12□□□□□ -1.27
SYNE2-209ENST00000553308 FUOMA2VDF0 154 aa7.12□□□□□ -1.27
SYNE2-209ENST00000553308 ZNF729A6NN14 1252 aaPredicted RBP7.12□□□□□ -1.27
SYNE2-209ENST00000553308 LY86O95711 162 aa7.12□□□□□ -1.27
SYNE2-209ENST00000553308 CYB5AP00167 134 aa7.12□□□□□ -1.27
SYNE2-209ENST00000553308 IGKV1D-33P01593 117 aa7.12□□□□□ -1.27
SYNE2-209ENST00000553308 IGKV1-33P01594 117 aa7.12□□□□□ -1.27
SYNE2-209ENST00000553308 ANXA8P13928 327 aa7.12□□□□□ -1.27
SYNE2-209ENST00000553308 ZNF44P15621 663 aa7.12□□□□□ -1.27
SYNE2-209ENST00000553308 RBP2P50120 134 aa7.12□□□□□ -1.27
SYNE2-209ENST00000553308 CRISP1P54107 249 aa7.12□□□□□ -1.27
SYNE2-209ENST00000553308 ATP1B3P54709 279 aa7.12□□□□□ -1.27
SYNE2-209ENST00000553308 MTCP1P56278 107 aa7.12□□□□□ -1.27
SYNE2-209ENST00000553308 SCN1BQ07699 218 aa7.12□□□□□ -1.27
SYNE2-209ENST00000553308 KRBOX4Q5JUW0 171 aa7.12□□□□□ -1.27
SYNE2-209ENST00000553308 TEX38Q6PEX7 206 aa7.12□□□□□ -1.27
SYNE2-209ENST00000553308 MEPCEQ7L2J0 689 aaKnown RBP7.12□□□□□ -1.27
SYNE2-209ENST00000553308 SBSPONQ8IVN8 264 aa7.12□□□□□ -1.27
SYNE2-209ENST00000553308 CCDC124Q96CT7 223 aaKnown RBP7.12□□□□□ -1.27
SYNE2-209ENST00000553308 ADAT3Q96EY9 351 aaPredicted RBP7.12□□□□□ -1.27
SYNE2-209ENST00000553308 MNTQ99583 582 aa7.12□□□□□ -1.27
SYNE2-209ENST00000553308 TBX5Q99593 518 aa7.12□□□□□ -1.27
SYNE2-209ENST00000553308 PCDHB16Q9NRJ7 776 aa7.12□□□□□ -1.27
SYNE2-209ENST00000553308 AMMECR1Q9Y4X0 333 aaPredicted RBP7.12□□□□□ -1.27
SYNE2-209ENST00000553308 KBTBD11-OT1A0A1B0GTJ5 212 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 B2RBV5 119 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 J3QR06 171 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 AP4M1O00189 453 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 SLC33A1O00400 549 aaPredicted RBP7.11□□□□□ -1.27
SYNE2-209ENST00000553308 APOL3O95236 402 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 SERPINA3P01011 423 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 KRT8P05787 483 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 CSN2P05814 226 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 LYL1P12980 280 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 GLP1RP43220 463 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 KIR3DL2P43630 455 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 GPR12P47775 334 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 GNG10P50151 68 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 PDZK1IP1Q13113 114 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 MADCAM1Q13477 382 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 KIR2DS1Q14954 304 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 PTGES3Q15185 160 aaKnown RBP7.11□□□□□ -1.27
SYNE2-209ENST00000553308 ZNF260Q3ZCT1 412 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 HSP90B2PQ58FF3 399 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 CXorf66Q5JRM2 361 aaPredicted RBP7.11□□□□□ -1.27
SYNE2-209ENST00000553308 AADACL4Q5VUY2 407 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 Q6P435 159 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 RDH10Q8IZV5 341 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 ARHGAP24Q8N264 748 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 PRSS35Q8N3Z0 413 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 DNAAF1Q8NEP3 725 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 OR5D18Q8NGL1 313 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 CANT1Q8WVQ1 401 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 PP6455Q8WZ26 134 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 ASB9Q96DX5 294 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 LRGUKQ96M69 825 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 SPACA5Q96QH8 159 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 ADI1Q9BV57 179 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 COMMD4Q9H0A8 199 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 PALMDQ9NP74 551 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 SMAD5-AS1Q9Y6J3 95 aa7.11□□□□□ -1.27
SYNE2-209ENST00000553308 RYR2Q92736 4967 aa7.1□□□□□ -1.27
SYNE2-209ENST00000553308 IGHV3-72A0A0B4J1Y9 119 aa7.1□□□□□ -1.27
SYNE2-209ENST00000553308 A0A1W2PQL4 384 aaPredicted RBP7.1□□□□□ -1.27
SYNE2-209ENST00000553308 HSPB6O14558 160 aa7.1□□□□□ -1.27
SYNE2-209ENST00000553308 KDM4BO94953 1096 aa7.1□□□□□ -1.27
SYNE2-209ENST00000553308 CGB3P0DN86 165 aa7.1□□□□□ -1.27
SYNE2-209ENST00000553308 CGB7P0DN87 165 aa7.1□□□□□ -1.27
SYNE2-209ENST00000553308 ATF1P18846 271 aa7.1□□□□□ -1.27
SYNE2-209ENST00000553308 CDX1P47902 265 aaPredicted RBP7.1□□□□□ -1.27
SYNE2-209ENST00000553308 RAB7AP51149 207 aa7.1□□□□□ -1.27
SYNE2-209ENST00000553308 MNAT1P51948 309 aa7.1□□□□□ -1.27
SYNE2-209ENST00000553308 BNIP1Q12981 228 aa7.1□□□□□ -1.27
SYNE2-209ENST00000553308 FOXE3Q13461 319 aa7.1□□□□□ -1.27
SYNE2-209ENST00000553308 GPR50Q13585 617 aa7.1□□□□□ -1.27
SYNE2-209ENST00000553308 FHL3Q13643 280 aa7.1□□□□□ -1.27
SYNE2-209ENST00000553308 DOC2BQ14184 412 aa7.1□□□□□ -1.27
SYNE2-209ENST00000553308 LTC4SQ16873 150 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms