RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 MSI2Q96DH6 328 aaKnown RBP17.48■□□□□ 0.39
CACNB3-210ENST00000548874 NICN1Q9BSH3 213 aa17.48■□□□□ 0.39
CACNB3-210ENST00000548874 URM1Q9BTM9 101 aaKnown RBP17.48■□□□□ 0.39
CACNB3-210ENST00000548874 ABRACLQ9P1F3 81 aa17.48■□□□□ 0.39
CACNB3-210ENST00000548874 A0A0A6YYD4 124 aa17.47■□□□□ 0.39
CACNB3-210ENST00000548874 CCDC160A6NGH7 325 aa17.47■□□□□ 0.39
CACNB3-210ENST00000548874 MSMBP08118 114 aa17.47■□□□□ 0.39
CACNB3-210ENST00000548874 GABRR1P24046 479 aa17.47■□□□□ 0.39
CACNB3-210ENST00000548874 RORCP51449 518 aa17.47■□□□□ 0.39
CACNB3-210ENST00000548874 LCN2P80188 198 aa17.47■□□□□ 0.39
CACNB3-210ENST00000548874 PAX2Q02962 417 aa17.47■□□□□ 0.39
CACNB3-210ENST00000548874 METAP1DQ6UB28 335 aaPredicted RBP17.47■□□□□ 0.39
CACNB3-210ENST00000548874 OR5D13Q8NGL4 314 aa17.47■□□□□ 0.39
CACNB3-210ENST00000548874 OR5H6Q8NGV6 325 aa17.47■□□□□ 0.39
CACNB3-210ENST00000548874 PPP1R35Q8TAP8 253 aa17.47■□□□□ 0.39
CACNB3-210ENST00000548874 DYNC2LI1Q8TCX1 351 aa17.47■□□□□ 0.39
CACNB3-210ENST00000548874 ST8SIA4Q92187 359 aa17.47■□□□□ 0.39
CACNB3-210ENST00000548874 DACT3Q96B18 629 aaPredicted RBP17.47■□□□□ 0.39
CACNB3-210ENST00000548874 NDUFA13Q9P0J0 144 aa17.47■□□□□ 0.39
CACNB3-210ENST00000548874 ETV7Q9Y603 341 aa17.47■□□□□ 0.39
CACNB3-210ENST00000548874 ZNF469Q96JG9 3925 aaPredicted RBP17.46■□□□□ 0.39
CACNB3-210ENST00000548874 FOXI3A8MTJ6 420 aaPredicted RBP17.46■□□□□ 0.39
CACNB3-210ENST00000548874 C22orf46C9J442 243 aa17.46■□□□□ 0.39
CACNB3-210ENST00000548874 CSN2P05814 226 aa17.46■□□□□ 0.39
CACNB3-210ENST00000548874 NDUFB7P17568 137 aa17.46■□□□□ 0.39
CACNB3-210ENST00000548874 DYNC1I2Q13409 638 aaKnown RBP17.46■□□□□ 0.39
CACNB3-210ENST00000548874 CYB5R2Q6BCY4 276 aa17.46■□□□□ 0.39
CACNB3-210ENST00000548874 BIVMQ86UB2 503 aa17.46■□□□□ 0.39
CACNB3-210ENST00000548874 SUMF2Q8NBJ7 301 aa17.46■□□□□ 0.39
CACNB3-210ENST00000548874 CHST6Q9GZX3 395 aa17.46■□□□□ 0.39
CACNB3-210ENST00000548874 PPA2Q9H2U2 334 aa17.46■□□□□ 0.39
CACNB3-210ENST00000548874 SPACA1Q9HBV2 294 aa17.46■□□□□ 0.39
CACNB3-210ENST00000548874 LPAR2Q9HBW0 351 aa17.46■□□□□ 0.39
CACNB3-210ENST00000548874 SPATA2Q9UM82 520 aa17.46■□□□□ 0.39
CACNB3-210ENST00000548874 ACANP16112 2415 aa17.45■□□□□ 0.38
CACNB3-210ENST00000548874 PPIAL4CA0A0B4J2A2 164 aa17.45■□□□□ 0.38
CACNB3-210ENST00000548874 H3BUI4 141 aa17.45■□□□□ 0.38
CACNB3-210ENST00000548874 MGST3O14880 152 aa17.45■□□□□ 0.38
CACNB3-210ENST00000548874 ECDO95905 644 aaPredicted RBP17.45■□□□□ 0.38
CACNB3-210ENST00000548874 ZNF182P17025 639 aaPredicted RBP17.45■□□□□ 0.38
CACNB3-210ENST00000548874 FUT3P21217 361 aa17.45■□□□□ 0.38
CACNB3-210ENST00000548874 GRK1Q15835 563 aa17.45■□□□□ 0.38
CACNB3-210ENST00000548874 PAN3Q58A45 887 aaKnown RBP17.45■□□□□ 0.38
CACNB3-210ENST00000548874 CD276Q5ZPR3 534 aa17.45■□□□□ 0.38
CACNB3-210ENST00000548874 BTN2A1Q7KYR7 527 aa17.45■□□□□ 0.38
CACNB3-210ENST00000548874 C8orf46Q8TAG6 207 aa17.45■□□□□ 0.38
CACNB3-210ENST00000548874 DCTN5Q9BTE1 182 aa17.45■□□□□ 0.38
CACNB3-210ENST00000548874 DPCDQ9BVM2 203 aaPredicted RBP17.45■□□□□ 0.38
CACNB3-210ENST00000548874 DOCK11Q5JSL3 2073 aa17.44■□□□□ 0.38
CACNB3-210ENST00000548874 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.44■□□□□ 0.38
CACNB3-210ENST00000548874 LOC105371242A0A075B767 164 aa17.44■□□□□ 0.38
CACNB3-210ENST00000548874 TRAV20A0A0B4J274 112 aa17.44■□□□□ 0.38
CACNB3-210ENST00000548874 PDCD6O75340 191 aa17.44■□□□□ 0.38
CACNB3-210ENST00000548874 GLAP06280 429 aa17.44■□□□□ 0.38
CACNB3-210ENST00000548874 CHATP28329 748 aa17.44■□□□□ 0.38
CACNB3-210ENST00000548874 KCNJ3P48549 501 aa17.44■□□□□ 0.38
CACNB3-210ENST00000548874 PAX5Q02548 391 aa17.44■□□□□ 0.38
CACNB3-210ENST00000548874 FAM189A2Q15884 450 aa17.44■□□□□ 0.38
CACNB3-210ENST00000548874 ATAD3CQ5T2N8 411 aa17.44■□□□□ 0.38
CACNB3-210ENST00000548874 FOXB2Q5VYV0 432 aa17.44■□□□□ 0.38
CACNB3-210ENST00000548874 RAB12Q6IQ22 244 aa17.44■□□□□ 0.38
CACNB3-210ENST00000548874 LY6G5BQ8NDX9 201 aa17.44■□□□□ 0.38
CACNB3-210ENST00000548874 ACOT12Q8WYK0 555 aa17.44■□□□□ 0.38
CACNB3-210ENST00000548874 SLC25A38Q96DW6 304 aa17.44■□□□□ 0.38
CACNB3-210ENST00000548874 CCDC59Q9P031 241 aaKnown RBP17.44■□□□□ 0.38
CACNB3-210ENST00000548874 RPUSD1Q9UJJ7 312 aaKnown RBP17.44■□□□□ 0.38
CACNB3-210ENST00000548874 TRBV23-1A0A0A0MS06 115 aa17.43■□□□□ 0.38
CACNB3-210ENST00000548874 HSPB6O14558 160 aa17.43■□□□□ 0.38
CACNB3-210ENST00000548874 SOCS1O15524 211 aa17.43■□□□□ 0.38
CACNB3-210ENST00000548874 CD5LO43866 347 aa17.43■□□□□ 0.38
CACNB3-210ENST00000548874 ZNF16P17020 682 aaPredicted RBP17.43■□□□□ 0.38
CACNB3-210ENST00000548874 ERP29P30040 261 aaKnown RBP17.43■□□□□ 0.38
CACNB3-210ENST00000548874 VEGFCP49767 419 aa17.43■□□□□ 0.38
CACNB3-210ENST00000548874 DVL1P1P54792 670 aaPredicted RBP17.43■□□□□ 0.38
CACNB3-210ENST00000548874 GDPD3Q7L5L3 318 aa17.43■□□□□ 0.38
CACNB3-210ENST00000548874 BPIFB2Q8N4F0 458 aa17.43■□□□□ 0.38
CACNB3-210ENST00000548874 OR56B1Q8NGI3 324 aa17.43■□□□□ 0.38
CACNB3-210ENST00000548874 RAB40AQ8WXH6 277 aa17.43■□□□□ 0.38
CACNB3-210ENST00000548874 TMEM186Q96B77 213 aa17.43■□□□□ 0.38
CACNB3-210ENST00000548874 DGCR14Q96DF8 476 aaKnown RBP17.43■□□□□ 0.38
CACNB3-210ENST00000548874 COQ2Q96H96 371 aa17.43■□□□□ 0.38
CACNB3-210ENST00000548874 MMP26Q9NRE1 261 aa17.43■□□□□ 0.38
CACNB3-210ENST00000548874 RHBDL2Q9NX52 303 aa17.43■□□□□ 0.38
CACNB3-210ENST00000548874 PEX16Q9Y5Y5 336 aa17.43■□□□□ 0.38
CACNB3-210ENST00000548874 CELSR1Q9NYQ6 3014 aa17.42■□□□□ 0.38
CACNB3-210ENST00000548874 HIVEP1P15822 2718 aa17.42■□□□□ 0.38
CACNB3-210ENST00000548874 ABCA1O95477 2261 aa17.42■□□□□ 0.38
CACNB3-210ENST00000548874 IGHV2-70DA0A0C4DH43 119 aa17.42■□□□□ 0.38
CACNB3-210ENST00000548874 METTL21EPA6NDL7 271 aa17.42■□□□□ 0.38
CACNB3-210ENST00000548874 RAB27BO00194 218 aa17.42■□□□□ 0.38
CACNB3-210ENST00000548874 TGFAP01135 160 aa17.42■□□□□ 0.38
CACNB3-210ENST00000548874 BLVRBP30043 206 aaPredicted RBP17.42■□□□□ 0.38
CACNB3-210ENST00000548874 SOX6P35712 828 aa17.42■□□□□ 0.38
CACNB3-210ENST00000548874 P2RX3P56373 397 aa17.42■□□□□ 0.38
CACNB3-210ENST00000548874 TMEM50BP56557 158 aa17.42■□□□□ 0.38
CACNB3-210ENST00000548874 ATXN7L3Q14CW9 347 aaPredicted RBP17.42■□□□□ 0.38
CACNB3-210ENST00000548874 GLCCI1Q86VQ1 547 aa17.42■□□□□ 0.38
CACNB3-210ENST00000548874 PLPPR1Q8TBJ4 325 aa17.42■□□□□ 0.38
CACNB3-210ENST00000548874 H1FXQ92522 213 aaKnown RBP17.42■□□□□ 0.38
CACNB3-210ENST00000548874 AP3S1Q92572 193 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms