RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 GNGT2O14610 69 aa10.97□□□□□ -0.65
VARS-227ENST00000489979 SH2D1BO14796 132 aa10.97□□□□□ -0.65
VARS-227ENST00000489979 FGF16O43320 207 aa10.97□□□□□ -0.65
VARS-227ENST00000489979 CYB5AP00167 134 aa10.97□□□□□ -0.65
VARS-227ENST00000489979 SERPINA3P01011 423 aa10.97□□□□□ -0.65
VARS-227ENST00000489979 IGHG2P01859 326 aa10.97□□□□□ -0.65
VARS-227ENST00000489979 RPLP1P05386 114 aaKnown RBP10.97□□□□□ -0.65
VARS-227ENST00000489979 PRKACGP22612 351 aa10.97□□□□□ -0.65
VARS-227ENST00000489979 NFYBP25208 207 aa10.97□□□□□ -0.65
VARS-227ENST00000489979 RBP2P50120 134 aa10.97□□□□□ -0.65
VARS-227ENST00000489979 ATP1B3P54709 279 aa10.97□□□□□ -0.65
VARS-227ENST00000489979 TRIM25Q14258 630 aaKnown RBP10.97□□□□□ -0.65
VARS-227ENST00000489979 C17orf58Q2M2W7 97 aa10.97□□□□□ -0.65
VARS-227ENST00000489979 TEX38Q6PEX7 206 aa10.97□□□□□ -0.65
VARS-227ENST00000489979 LCNL1Q6ZST4 164 aa10.97□□□□□ -0.65
VARS-227ENST00000489979 CATSPERDQ86XM0 798 aa10.97□□□□□ -0.65
VARS-227ENST00000489979 FOXRED2Q8IWF2 684 aa10.97□□□□□ -0.65
VARS-227ENST00000489979 OR8U1Q8NH10 309 aa10.97□□□□□ -0.65
VARS-227ENST00000489979 RCHY1Q96PM5 261 aa10.97□□□□□ -0.65
VARS-227ENST00000489979 ADGRL4Q9HBW9 690 aa10.97□□□□□ -0.65
VARS-227ENST00000489979 HMG20AQ9NP66 347 aa10.97□□□□□ -0.65
VARS-227ENST00000489979 ZNF446Q9NWS9 450 aa10.97□□□□□ -0.65
VARS-227ENST00000489979 LCE6AA0A183 80 aa10.96□□□□□ -0.65
VARS-227ENST00000489979 A0A1W2PPI3 338 aa10.96□□□□□ -0.65
VARS-227ENST00000489979 PRKYO43930 277 aa10.96□□□□□ -0.65
VARS-227ENST00000489979 LYL1P12980 280 aa10.96□□□□□ -0.65
VARS-227ENST00000489979 DOC2BQ14184 412 aa10.96□□□□□ -0.65
VARS-227ENST00000489979 DIAPH2-AS1Q14236 149 aa10.96□□□□□ -0.65
VARS-227ENST00000489979 KIR2DS1Q14954 304 aa10.96□□□□□ -0.65
VARS-227ENST00000489979 KRBOX4Q5JUW0 171 aa10.96□□□□□ -0.65
VARS-227ENST00000489979 MEPCEQ7L2J0 689 aaKnown RBP10.96□□□□□ -0.65
VARS-227ENST00000489979 SSX6Q7RTT6 188 aa10.96□□□□□ -0.65
VARS-227ENST00000489979 YIPF7Q8N8F6 280 aa10.96□□□□□ -0.65
VARS-227ENST00000489979 OR9G1Q8NH87 305 aa10.96□□□□□ -0.65
VARS-227ENST00000489979 COQ2Q96H96 371 aa10.96□□□□□ -0.65
VARS-227ENST00000489979 MNTQ99583 582 aa10.96□□□□□ -0.65
VARS-227ENST00000489979 ADI1Q9BV57 179 aa10.96□□□□□ -0.65
VARS-227ENST00000489979 CLN6Q9NWW5 311 aa10.96□□□□□ -0.65
VARS-227ENST00000489979 ZNF256Q9Y2P7 627 aaPredicted RBP10.96□□□□□ -0.65
VARS-227ENST00000489979 AMMECR1Q9Y4X0 333 aaPredicted RBP10.96□□□□□ -0.65
VARS-227ENST00000489979 ZNF729A6NN14 1252 aaPredicted RBP10.95□□□□□ -0.66
VARS-227ENST00000489979 LY86O95711 162 aa10.95□□□□□ -0.66
VARS-227ENST00000489979 IGKV1D-33P01593 117 aa10.95□□□□□ -0.66
VARS-227ENST00000489979 IGKV1-33P01594 117 aa10.95□□□□□ -0.66
VARS-227ENST00000489979 IGHV3-7P01780 117 aa10.95□□□□□ -0.66
VARS-227ENST00000489979 KRT8P05787 483 aa10.95□□□□□ -0.66
VARS-227ENST00000489979 ANXA8P13928 327 aa10.95□□□□□ -0.66
VARS-227ENST00000489979 CRISP1P54107 249 aa10.95□□□□□ -0.66
VARS-227ENST00000489979 MTCP1P56278 107 aa10.95□□□□□ -0.66
VARS-227ENST00000489979 SCN1BQ07699 218 aa10.95□□□□□ -0.66
VARS-227ENST00000489979 PNLIPRP3Q17RR3 467 aa10.95□□□□□ -0.66
VARS-227ENST00000489979 SBSPONQ8IVN8 264 aa10.95□□□□□ -0.66
VARS-227ENST00000489979 ADGRG5Q8IZF4 528 aa10.95□□□□□ -0.66
VARS-227ENST00000489979 ARHGAP24Q8N264 748 aa10.95□□□□□ -0.66
VARS-227ENST00000489979 CCDC54Q8NEL0 328 aa10.95□□□□□ -0.66
VARS-227ENST00000489979 DNAAF1Q8NEP3 725 aa10.95□□□□□ -0.66
VARS-227ENST00000489979 LEAP2Q969E1 77 aa10.95□□□□□ -0.66
VARS-227ENST00000489979 KIRREL1Q96J84 757 aa10.95□□□□□ -0.66
VARS-227ENST00000489979 HRASLS5Q96KN8 279 aa10.95□□□□□ -0.66
VARS-227ENST00000489979 LRGUKQ96M69 825 aa10.95□□□□□ -0.66
VARS-227ENST00000489979 TBX5Q99593 518 aa10.95□□□□□ -0.66
VARS-227ENST00000489979 PALMDQ9NP74 551 aa10.95□□□□□ -0.66
VARS-227ENST00000489979 H2AFY2Q9P0M6 372 aaPredicted RBP10.95□□□□□ -0.66
VARS-227ENST00000489979 SMAD5-AS1Q9Y6J3 95 aa10.95□□□□□ -0.66
VARS-227ENST00000489979 HYDINQ4G0P3 5121 aa10.95□□□□□ -0.66
VARS-227ENST00000489979 CSMD3Q7Z407 3707 aa10.95□□□□□ -0.66
VARS-227ENST00000489979 IGKV1-9A0A0C4DH69 117 aa10.94□□□□□ -0.66
VARS-227ENST00000489979 IGKV1-12A0A0C4DH73 117 aa10.94□□□□□ -0.66
VARS-227ENST00000489979 B2RBV5 119 aa10.94□□□□□ -0.66
VARS-227ENST00000489979 J3QR06 171 aa10.94□□□□□ -0.66
VARS-227ENST00000489979 M0R129 80 aa10.94□□□□□ -0.66
VARS-227ENST00000489979 DYNC1I1O14576 645 aa10.94□□□□□ -0.66
VARS-227ENST00000489979 IGKV1D-12P01611 117 aa10.94□□□□□ -0.66
VARS-227ENST00000489979 ZNF44P15621 663 aa10.94□□□□□ -0.66
VARS-227ENST00000489979 CDX1P47902 265 aaPredicted RBP10.94□□□□□ -0.66
VARS-227ENST00000489979 MNAT1P51948 309 aa10.94□□□□□ -0.66
VARS-227ENST00000489979 PDZK1IP1Q13113 114 aa10.94□□□□□ -0.66
VARS-227ENST00000489979 GPR50Q13585 617 aa10.94□□□□□ -0.66
VARS-227ENST00000489979 ATXN7L3Q14CW9 347 aaPredicted RBP10.94□□□□□ -0.66
VARS-227ENST00000489979 ZNF260Q3ZCT1 412 aa10.94□□□□□ -0.66
VARS-227ENST00000489979 CXorf66Q5JRM2 361 aaPredicted RBP10.94□□□□□ -0.66
VARS-227ENST00000489979 PP6455Q8WZ26 134 aa10.94□□□□□ -0.66
VARS-227ENST00000489979 RFT1Q96AA3 541 aa10.94□□□□□ -0.66
VARS-227ENST00000489979 COMMD4Q9H0A8 199 aa10.94□□□□□ -0.66
VARS-227ENST00000489979 PPIL3Q9H2H8 161 aaKnown RBP10.94□□□□□ -0.66
VARS-227ENST00000489979 KBTBD11-OT1A0A1B0GTJ5 212 aa10.93□□□□□ -0.66
VARS-227ENST00000489979 LOC107986453A0A1B0GWG9 222 aa10.93□□□□□ -0.66
VARS-227ENST00000489979 AP4M1O00189 453 aa10.93□□□□□ -0.66
VARS-227ENST00000489979 CSN2P05814 226 aa10.93□□□□□ -0.66
VARS-227ENST00000489979 ATF1P18846 271 aa10.93□□□□□ -0.66
VARS-227ENST00000489979 GPR12P47775 334 aa10.93□□□□□ -0.66
VARS-227ENST00000489979 RAB7AP51149 207 aa10.93□□□□□ -0.66
VARS-227ENST00000489979 BNIP1Q12981 228 aa10.93□□□□□ -0.66
VARS-227ENST00000489979 MADCAM1Q13477 382 aa10.93□□□□□ -0.66
VARS-227ENST00000489979 PTGES3Q15185 160 aaKnown RBP10.93□□□□□ -0.66
VARS-227ENST00000489979 AADACL4Q5VUY2 407 aa10.93□□□□□ -0.66
VARS-227ENST00000489979 Q6P435 159 aa10.93□□□□□ -0.66
VARS-227ENST00000489979 LHFPL2Q6ZUX7 228 aa10.93□□□□□ -0.66
VARS-227ENST00000489979 RDH10Q8IZV5 341 aa10.93□□□□□ -0.66
VARS-227ENST00000489979 OR8H3Q8N146 312 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms