RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 A0A1W2PPK0 400 aa12.37□□□□□ -0.43
VARS-223ENST00000474643 F8VVB4 439 aa12.37□□□□□ -0.43
VARS-223ENST00000474643 F8VWA3 439 aa12.37□□□□□ -0.43
VARS-223ENST00000474643 CCRL2O00421 344 aa12.37□□□□□ -0.43
VARS-223ENST00000474643 CHRM2P08172 466 aa12.37□□□□□ -0.43
VARS-223ENST00000474643 MAPK3P27361 379 aaPredicted RBP12.37□□□□□ -0.43
VARS-223ENST00000474643 BDKRB2P30411 391 aa12.37□□□□□ -0.43
VARS-223ENST00000474643 GABRA5P31644 462 aa12.37□□□□□ -0.43
VARS-223ENST00000474643 TGFBR2P37173 567 aa12.37□□□□□ -0.43
VARS-223ENST00000474643 NPBWR2P48146 333 aa12.37□□□□□ -0.43
VARS-223ENST00000474643 RPL31P62899 125 aaKnown RBP12.37□□□□□ -0.43
VARS-223ENST00000474643 COL10A1Q03692 680 aa12.37□□□□□ -0.43
VARS-223ENST00000474643 DDI2Q5TDH0 399 aa12.37□□□□□ -0.43
VARS-223ENST00000474643 Q8N7P7 452 aa12.37□□□□□ -0.43
VARS-223ENST00000474643 OR51A2Q8NGJ7 313 aa12.37□□□□□ -0.43
VARS-223ENST00000474643 LINC01006Q8NI28 216 aa12.37□□□□□ -0.43
VARS-223ENST00000474643 TNFAIP8L1Q8WVP5 186 aa12.37□□□□□ -0.43
VARS-223ENST00000474643 ORAI1Q96D31 301 aa12.37□□□□□ -0.43
VARS-223ENST00000474643 TMED9Q9BVK6 235 aa12.37□□□□□ -0.43
VARS-223ENST00000474643 PPA2Q9H2U2 334 aa12.37□□□□□ -0.43
VARS-223ENST00000474643 HEXA-AS1Q9H8Q6 139 aa12.37□□□□□ -0.43
VARS-223ENST00000474643 TMEM138Q9NPI0 162 aa12.37□□□□□ -0.43
VARS-223ENST00000474643 NDUFB11Q9NX14 153 aa12.37□□□□□ -0.43
VARS-223ENST00000474643 SCOCQ9UIL1 159 aa12.37□□□□□ -0.43
VARS-223ENST00000474643 GSTK1Q9Y2Q3 226 aa12.37□□□□□ -0.43
VARS-223ENST00000474643 MAB21L2Q9Y586 359 aa12.37□□□□□ -0.43
VARS-223ENST00000474643 SC5DO75845 299 aa12.36□□□□□ -0.43
VARS-223ENST00000474643 HAND1O96004 215 aa12.36□□□□□ -0.43
VARS-223ENST00000474643 DUSP1P28562 367 aa12.36□□□□□ -0.43
VARS-223ENST00000474643 TAF9Q16594 264 aa12.36□□□□□ -0.43
VARS-223ENST00000474643 CD200R1LQ6Q8B3 271 aa12.36□□□□□ -0.43
VARS-223ENST00000474643 RNF144BQ7Z419 303 aa12.36□□□□□ -0.43
VARS-223ENST00000474643 SAXO1Q8IYX7 474 aa12.36□□□□□ -0.43
VARS-223ENST00000474643 ZSCAN4Q8NAM6 433 aaPredicted RBP12.36□□□□□ -0.43
VARS-223ENST00000474643 OR52N4Q8NGI2 321 aa12.36□□□□□ -0.43
VARS-223ENST00000474643 CITED1Q99966 193 aa12.36□□□□□ -0.43
VARS-223ENST00000474643 MMP27Q9H306 513 aa12.36□□□□□ -0.43
VARS-223ENST00000474643 RAB18Q9NP72 206 aa12.36□□□□□ -0.43
VARS-223ENST00000474643 ING4Q9UNL4 249 aa12.36□□□□□ -0.43
VARS-223ENST00000474643 H3BUX3 64 aa12.35□□□□□ -0.43
VARS-223ENST00000474643 SH2D1BO14796 132 aa12.35□□□□□ -0.43
VARS-223ENST00000474643 KCNAB3O43448 404 aa12.35□□□□□ -0.43
VARS-223ENST00000474643 GPX5O75715 221 aa12.35□□□□□ -0.43
VARS-223ENST00000474643 TK1P04183 234 aa12.35□□□□□ -0.43
VARS-223ENST00000474643 ALDOBP05062 364 aa12.35□□□□□ -0.43
VARS-223ENST00000474643 TFAP2AP05549 437 aa12.35□□□□□ -0.43
VARS-223ENST00000474643 GABRR1P24046 479 aa12.35□□□□□ -0.43
VARS-223ENST00000474643 COX7A1P24310 79 aa12.35□□□□□ -0.43
VARS-223ENST00000474643 PSMB9P28065 219 aa12.35□□□□□ -0.43
VARS-223ENST00000474643 ZNF93P35789 620 aaPredicted RBP12.35□□□□□ -0.43
VARS-223ENST00000474643 RPL5P46777 297 aaKnown RBP12.35□□□□□ -0.43
VARS-223ENST00000474643 RPS11P62280 158 aaKnown RBP eCLIP12.35□□□□□ -0.43
VARS-223ENST00000474643 SCN1BQ07699 218 aa12.35□□□□□ -0.43
VARS-223ENST00000474643 RSU1Q15404 277 aa12.35□□□□□ -0.43
VARS-223ENST00000474643 LY6EQ16553 131 aa12.35□□□□□ -0.43
VARS-223ENST00000474643 TIMM50Q3ZCQ8 353 aa12.35□□□□□ -0.43
VARS-223ENST00000474643 LIPKQ5VXJ0 399 aa12.35□□□□□ -0.43
VARS-223ENST00000474643 UNQ9370/PRO34162Q6UXP9 181 aa12.35□□□□□ -0.43
VARS-223ENST00000474643 Q6ZSV7 163 aa12.35□□□□□ -0.43
VARS-223ENST00000474643 GDPD3Q7L5L3 318 aa12.35□□□□□ -0.43
VARS-223ENST00000474643 OR4M1Q8NGD0 313 aa12.35□□□□□ -0.43
VARS-223ENST00000474643 OR4C13Q8NGP0 309 aa12.35□□□□□ -0.43
VARS-223ENST00000474643 SSX3Q99909 188 aa12.35□□□□□ -0.43
VARS-223ENST00000474643 RHOFQ9HBH0 211 aa12.35□□□□□ -0.43
VARS-223ENST00000474643 HMG20AQ9NP66 347 aa12.35□□□□□ -0.43
VARS-223ENST00000474643 EXOSC4Q9NPD3 245 aaKnown RBP12.35□□□□□ -0.43
VARS-223ENST00000474643 C19orf12Q9NSK7 152 aa12.35□□□□□ -0.43
VARS-223ENST00000474643 IL36RNQ9UBH0 155 aa12.35□□□□□ -0.43
VARS-223ENST00000474643 IGKV1-12A0A0C4DH73 117 aa12.34□□□□□ -0.43
VARS-223ENST00000474643 GABRPO00591 440 aa12.34□□□□□ -0.43
VARS-223ENST00000474643 KDM4BO94953 1096 aa12.34□□□□□ -0.43
VARS-223ENST00000474643 IGKV1D-12P01611 117 aa12.34□□□□□ -0.43
VARS-223ENST00000474643 MAS1P04201 325 aa12.34□□□□□ -0.43
VARS-223ENST00000474643 ZNF44P15621 663 aa12.34□□□□□ -0.43
VARS-223ENST00000474643 ALDH3B2P48448 385 aa12.34□□□□□ -0.43
VARS-223ENST00000474643 GP2P55259 537 aaKnown RBP12.34□□□□□ -0.43
VARS-223ENST00000474643 EDDM3BP56851 147 aa12.34□□□□□ -0.43
VARS-223ENST00000474643 ERVFRD-1P60508 538 aa12.34□□□□□ -0.43
VARS-223ENST00000474643 DOC2BQ14184 412 aa12.34□□□□□ -0.43
VARS-223ENST00000474643 EDDM3AQ14507 147 aa12.34□□□□□ -0.43
VARS-223ENST00000474643 NEDD8Q15843 81 aa12.34□□□□□ -0.43
VARS-223ENST00000474643 C2orf68Q2NKX9 166 aa12.34□□□□□ -0.43
VARS-223ENST00000474643 LRRC75BQ2VPJ9 315 aa12.34□□□□□ -0.43
VARS-223ENST00000474643 SPIN3Q5JUX0 258 aa12.34□□□□□ -0.43
VARS-223ENST00000474643 ZNF529Q6P280 563 aa12.34□□□□□ -0.43
VARS-223ENST00000474643 Q6ZTK2 550 aa12.34□□□□□ -0.43
VARS-223ENST00000474643 JAGN1Q8N5M9 183 aa12.34□□□□□ -0.43
VARS-223ENST00000474643 BEND2Q8NDZ0 799 aa12.34□□□□□ -0.43
VARS-223ENST00000474643 PPP1R35Q8TAP8 253 aa12.34□□□□□ -0.43
VARS-223ENST00000474643 SNX22Q96L94 193 aa12.34□□□□□ -0.43
VARS-223ENST00000474643 DERL3Q96Q80 235 aa12.34□□□□□ -0.43
VARS-223ENST00000474643 NKX3-1Q99801 234 aaPredicted RBP12.34□□□□□ -0.43
VARS-223ENST00000474643 TRBV5-7A0A0A0MS05 114 aa12.33□□□□□ -0.44
VARS-223ENST00000474643 TRDV1A0A1B0GX56 115 aa12.33□□□□□ -0.44
VARS-223ENST00000474643 K7N7A8 449 aa12.33□□□□□ -0.44
VARS-223ENST00000474643 SIRPB1O00241 398 aa12.33□□□□□ -0.44
VARS-223ENST00000474643 HTR3BO95264 441 aa12.33□□□□□ -0.44
VARS-223ENST00000474643 CSTBP04080 98 aaKnown RBP12.33□□□□□ -0.44
VARS-223ENST00000474643 FSTP19883 344 aa12.33□□□□□ -0.44
VARS-223ENST00000474643 FGF9P31371 208 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms