RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 RAB12Q6IQ22 244 aa12.63□□□□□ -0.39
SNIP1-202ENST00000468040 GDPD3Q7L5L3 318 aa12.63□□□□□ -0.39
SNIP1-202ENST00000468040 CIARTQ8N365 385 aaPredicted RBP12.63□□□□□ -0.39
SNIP1-202ENST00000468040 SUMF2Q8NBJ7 301 aa12.63□□□□□ -0.39
SNIP1-202ENST00000468040 MAPK1IP1LQ8NDC0 245 aa12.63□□□□□ -0.39
SNIP1-202ENST00000468040 OR5H6Q8NGV6 325 aa12.63□□□□□ -0.39
SNIP1-202ENST00000468040 NEDD4LQ96PU5 975 aa12.63□□□□□ -0.39
SNIP1-202ENST00000468040 NICN1Q9BSH3 213 aa12.63□□□□□ -0.39
SNIP1-202ENST00000468040 DPCDQ9BVM2 203 aaPredicted RBP12.63□□□□□ -0.39
SNIP1-202ENST00000468040 ATG5Q9H1Y0 275 aa12.63□□□□□ -0.39
SNIP1-202ENST00000468040 RHBDL2Q9NX52 303 aa12.63□□□□□ -0.39
SNIP1-202ENST00000468040 CSMD1Q96PZ7 3565 aa12.63□□□□□ -0.39
SNIP1-202ENST00000468040 FAM157AC9JC47 383 aa12.62□□□□□ -0.39
SNIP1-202ENST00000468040 MCRIP1C9JLW8 97 aa12.62□□□□□ -0.39
SNIP1-202ENST00000468040 HSPB6O14558 160 aa12.62□□□□□ -0.39
SNIP1-202ENST00000468040 MGST3O14880 152 aa12.62□□□□□ -0.39
SNIP1-202ENST00000468040 PHF1O43189 567 aaPredicted RBP12.62□□□□□ -0.39
SNIP1-202ENST00000468040 BLVRBP30043 206 aaPredicted RBP12.62□□□□□ -0.39
SNIP1-202ENST00000468040 OR3A1P47881 315 aa12.62□□□□□ -0.39
SNIP1-202ENST00000468040 VEGFCP49767 419 aa12.62□□□□□ -0.39
SNIP1-202ENST00000468040 PLA2G7Q13093 441 aa12.62□□□□□ -0.39
SNIP1-202ENST00000468040 UBE2NLQ5JXB2 153 aa12.62□□□□□ -0.39
SNIP1-202ENST00000468040 FOXB2Q5VYV0 432 aa12.62□□□□□ -0.39
SNIP1-202ENST00000468040 SAMD12Q8N8I0 201 aa12.62□□□□□ -0.39
SNIP1-202ENST00000468040 LINC01356Q8N9X3 169 aa12.62□□□□□ -0.39
SNIP1-202ENST00000468040 OR4S1Q8NGB4 309 aa12.62□□□□□ -0.39
SNIP1-202ENST00000468040 PHF21AQ96BD5 680 aa12.62□□□□□ -0.39
SNIP1-202ENST00000468040 CMTM3Q96MX0 182 aa12.62□□□□□ -0.39
SNIP1-202ENST00000468040 DCUN1D5Q9BTE7 237 aa12.62□□□□□ -0.39
SNIP1-202ENST00000468040 CHST6Q9GZX3 395 aa12.62□□□□□ -0.39
SNIP1-202ENST00000468040 SHARPINQ9H0F6 387 aa12.62□□□□□ -0.39
SNIP1-202ENST00000468040 PPA2Q9H2U2 334 aa12.62□□□□□ -0.39
SNIP1-202ENST00000468040 COMMD3Q9UBI1 195 aa12.62□□□□□ -0.39
SNIP1-202ENST00000468040 POLR3KQ9Y2Y1 108 aaPredicted RBP12.62□□□□□ -0.39
SNIP1-202ENST00000468040 PEX16Q9Y5Y5 336 aa12.62□□□□□ -0.39
SNIP1-202ENST00000468040 MYO9AB2RTY4 2548 aa12.61□□□□□ -0.39
SNIP1-202ENST00000468040 LOC105371242A0A075B767 164 aa12.61□□□□□ -0.39
SNIP1-202ENST00000468040 TRBV23-1A0A0A0MS06 115 aa12.61□□□□□ -0.39
SNIP1-202ENST00000468040 A0A0A6YYD4 124 aa12.61□□□□□ -0.39
SNIP1-202ENST00000468040 A0A0A6YYH2 397 aa12.61□□□□□ -0.39
SNIP1-202ENST00000468040 FUOMA2VDF0 154 aa12.61□□□□□ -0.39
SNIP1-202ENST00000468040 A6NJ64 397 aa12.61□□□□□ -0.39
SNIP1-202ENST00000468040 KIAA1324LA8MWY0 1029 aaPredicted RBP12.61□□□□□ -0.39
SNIP1-202ENST00000468040 SMAD7O15105 426 aaKnown RBP12.61□□□□□ -0.39
SNIP1-202ENST00000468040 FCN3O75636 299 aa12.61□□□□□ -0.39
SNIP1-202ENST00000468040 MSMBP08118 114 aa12.61□□□□□ -0.39
SNIP1-202ENST00000468040 CHATP28329 748 aa12.61□□□□□ -0.39
SNIP1-202ENST00000468040 LCN2P80188 198 aa12.61□□□□□ -0.39
SNIP1-202ENST00000468040 NKAPLQ5M9Q1 402 aa12.61□□□□□ -0.39
SNIP1-202ENST00000468040 SIGIRRQ6IA17 410 aa12.61□□□□□ -0.39
SNIP1-202ENST00000468040 BTN2A1Q7KYR7 527 aa12.61□□□□□ -0.39
SNIP1-202ENST00000468040 NEK7Q8TDX7 302 aa12.61□□□□□ -0.39
SNIP1-202ENST00000468040 RAB40AQ8WXH6 277 aa12.61□□□□□ -0.39
SNIP1-202ENST00000468040 H1FXQ92522 213 aaKnown RBP12.61□□□□□ -0.39
SNIP1-202ENST00000468040 SLC25A38Q96DW6 304 aa12.61□□□□□ -0.39
SNIP1-202ENST00000468040 C18orf12Q96KH6 178 aa12.61□□□□□ -0.39
SNIP1-202ENST00000468040 NUDT16L1Q9BRJ7 211 aaKnown RBP12.61□□□□□ -0.39
SNIP1-202ENST00000468040 SLIRPQ9GZT3 109 aaKnown RBP12.61□□□□□ -0.39
SNIP1-202ENST00000468040 ABCG5Q9H222 651 aa12.61□□□□□ -0.39
SNIP1-202ENST00000468040 PLEKHJ1Q9NW61 149 aa12.61□□□□□ -0.39
SNIP1-202ENST00000468040 ZNF581Q9P0T4 197 aa12.61□□□□□ -0.39
SNIP1-202ENST00000468040 LPAR3Q9UBY5 353 aa12.61□□□□□ -0.39
SNIP1-202ENST00000468040 HSF4Q9ULV5 492 aa12.61□□□□□ -0.39
SNIP1-202ENST00000468040 CR1P17927 2039 aa12.61□□□□□ -0.39
SNIP1-202ENST00000468040 PPIAL4CA0A0B4J2A2 164 aa12.6□□□□□ -0.39
SNIP1-202ENST00000468040 FOXI3A8MTJ6 420 aaPredicted RBP12.6□□□□□ -0.39
SNIP1-202ENST00000468040 RAB27BO00194 218 aa12.6□□□□□ -0.39
SNIP1-202ENST00000468040 SOCS1O15524 211 aa12.6□□□□□ -0.39
SNIP1-202ENST00000468040 CA11O75493 328 aa12.6□□□□□ -0.39
SNIP1-202ENST00000468040 IGHV4-31P0DP07 118 aa12.6□□□□□ -0.39
SNIP1-202ENST00000468040 ZFP36P26651 326 aaKnown RBP12.6□□□□□ -0.39
SNIP1-202ENST00000468040 ERP29P30040 261 aaKnown RBP12.6□□□□□ -0.39
SNIP1-202ENST00000468040 PAX5Q02548 391 aa12.6□□□□□ -0.39
SNIP1-202ENST00000468040 EDDM3AQ14507 147 aa12.6□□□□□ -0.39
SNIP1-202ENST00000468040 ARL6IP1Q15041 203 aa12.6□□□□□ -0.39
SNIP1-202ENST00000468040 CYB5R2Q6BCY4 276 aa12.6□□□□□ -0.39
SNIP1-202ENST00000468040 METAP1DQ6UB28 335 aaPredicted RBP12.6□□□□□ -0.39
SNIP1-202ENST00000468040 BPIFB2Q8N4F0 458 aa12.6□□□□□ -0.39
SNIP1-202ENST00000468040 OR10R2Q8NGX6 335 aa12.6□□□□□ -0.39
SNIP1-202ENST00000468040 RAB3CQ96E17 227 aa12.6□□□□□ -0.39
SNIP1-202ENST00000468040 DCTN5Q9BTE1 182 aa12.6□□□□□ -0.39
SNIP1-202ENST00000468040 LPAR2Q9HBW0 351 aa12.6□□□□□ -0.39
SNIP1-202ENST00000468040 DIABLOQ9NR28 239 aa12.6□□□□□ -0.39
SNIP1-202ENST00000468040 RPUSD1Q9UJJ7 312 aaKnown RBP12.6□□□□□ -0.39
SNIP1-202ENST00000468040 A0A075B6Q4 140 aa12.59□□□□□ -0.39
SNIP1-202ENST00000468040 TRAV20A0A0B4J274 112 aa12.59□□□□□ -0.39
SNIP1-202ENST00000468040 ENSAO43768 121 aaKnown RBP12.59□□□□□ -0.39
SNIP1-202ENST00000468040 APOA1P02647 267 aa12.59□□□□□ -0.39
SNIP1-202ENST00000468040 INHBBP09529 407 aa12.59□□□□□ -0.39
SNIP1-202ENST00000468040 CD99P14209 185 aa12.59□□□□□ -0.39
SNIP1-202ENST00000468040 FOSL1P15407 271 aa12.59□□□□□ -0.39
SNIP1-202ENST00000468040 P2RX3P56373 397 aa12.59□□□□□ -0.39
SNIP1-202ENST00000468040 EDDM3BP56851 147 aa12.59□□□□□ -0.39
SNIP1-202ENST00000468040 RPL31P62899 125 aaKnown RBP12.59□□□□□ -0.39
SNIP1-202ENST00000468040 MEF2CQ06413 473 aaPredicted RBP12.59□□□□□ -0.39
SNIP1-202ENST00000468040 ATXN7L3Q14CW9 347 aaPredicted RBP12.59□□□□□ -0.39
SNIP1-202ENST00000468040 KRBOX4Q5JUW0 171 aa12.59□□□□□ -0.39
SNIP1-202ENST00000468040 BRICD5Q6PL45 260 aa12.59□□□□□ -0.39
SNIP1-202ENST00000468040 Q6ZTK2 550 aa12.59□□□□□ -0.39
SNIP1-202ENST00000468040 C6orf201Q7Z4U5 140 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms