RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 MYL9P24844 172 aa11.78□□□□□ -0.52
HMGXB4-206ENST00000466438 SOX6P35712 828 aa11.78□□□□□ -0.52
HMGXB4-206ENST00000466438 CX3CR1P49238 355 aa11.78□□□□□ -0.52
HMGXB4-206ENST00000466438 NANOS3P60323 173 aaKnown RBP11.78□□□□□ -0.52
HMGXB4-206ENST00000466438 SPCS2Q15005 226 aa11.78□□□□□ -0.52
HMGXB4-206ENST00000466438 DGUOKQ16854 277 aa11.78□□□□□ -0.52
HMGXB4-206ENST00000466438 C22orf42Q6IC83 251 aa11.78□□□□□ -0.52
HMGXB4-206ENST00000466438 PGAP1Q75T13 922 aa11.78□□□□□ -0.52
HMGXB4-206ENST00000466438 NDNFQ8TB73 568 aa11.78□□□□□ -0.52
HMGXB4-206ENST00000466438 GPR148Q8TDV2 347 aa11.78□□□□□ -0.52
HMGXB4-206ENST00000466438 RBMXL1Q96E39 390 aaKnown RBP11.78□□□□□ -0.52
HMGXB4-206ENST00000466438 PDCD1LG2Q9BQ51 273 aa11.78□□□□□ -0.52
HMGXB4-206ENST00000466438 DCUN1D5Q9BTE7 237 aa11.78□□□□□ -0.52
HMGXB4-206ENST00000466438 FRRS1LQ9P0K9 344 aa11.78□□□□□ -0.52
HMGXB4-206ENST00000466438 OR52A1Q9UKL2 312 aa11.78□□□□□ -0.52
HMGXB4-206ENST00000466438 OR4C45A6NMZ5 311 aa11.77□□□□□ -0.53
HMGXB4-206ENST00000466438 SRSF10O75494 262 aaKnown RBP11.77□□□□□ -0.53
HMGXB4-206ENST00000466438 IL1AP01583 271 aa11.77□□□□□ -0.53
HMGXB4-206ENST00000466438 SELLP14151 372 aa11.77□□□□□ -0.53
HMGXB4-206ENST00000466438 THBS3P49746 956 aa11.77□□□□□ -0.53
HMGXB4-206ENST00000466438 RAB13P51153 203 aa11.77□□□□□ -0.53
HMGXB4-206ENST00000466438 TPTEP56180 551 aa11.77□□□□□ -0.53
HMGXB4-206ENST00000466438 MFGE8Q08431 387 aaPredicted RBP11.77□□□□□ -0.53
HMGXB4-206ENST00000466438 MALLQ13021 153 aa11.77□□□□□ -0.53
HMGXB4-206ENST00000466438 Q499Y3 187 aa11.77□□□□□ -0.53
HMGXB4-206ENST00000466438 ACSM3Q53FZ2 586 aa11.77□□□□□ -0.53
HMGXB4-206ENST00000466438 TMEM244Q5VVB8 128 aa11.77□□□□□ -0.53
HMGXB4-206ENST00000466438 TSEN15Q8WW01 171 aaKnown RBP11.77□□□□□ -0.53
HMGXB4-206ENST00000466438 ABCB10Q9NRK6 738 aa11.77□□□□□ -0.53
HMGXB4-206ENST00000466438 FAM206AQ9NX38 181 aa11.77□□□□□ -0.53
HMGXB4-206ENST00000466438 CCDC59Q9P031 241 aaKnown RBP11.77□□□□□ -0.53
HMGXB4-206ENST00000466438 NUFIP1Q9UHK0 495 aaKnown RBP11.77□□□□□ -0.53
HMGXB4-206ENST00000466438 CD300LBA8K4G0 201 aa11.76□□□□□ -0.53
HMGXB4-206ENST00000466438 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.76□□□□□ -0.53
HMGXB4-206ENST00000466438 M0R135 149 aa11.76□□□□□ -0.53
HMGXB4-206ENST00000466438 SC5DO75845 299 aa11.76□□□□□ -0.53
HMGXB4-206ENST00000466438 ISG15P05161 165 aa11.76□□□□□ -0.53
HMGXB4-206ENST00000466438 CD2P06729 351 aa11.76□□□□□ -0.53
HMGXB4-206ENST00000466438 ANXA2P07355 339 aaKnown RBP11.76□□□□□ -0.53
HMGXB4-206ENST00000466438 OCM2P0CE71 109 aa11.76□□□□□ -0.53
HMGXB4-206ENST00000466438 AMY2BP19961 511 aa11.76□□□□□ -0.53
HMGXB4-206ENST00000466438 OTX1P32242 354 aaPredicted RBP11.76□□□□□ -0.53
HMGXB4-206ENST00000466438 KIR3DL2P43630 455 aa11.76□□□□□ -0.53
HMGXB4-206ENST00000466438 PRKXP51817 358 aa11.76□□□□□ -0.53
HMGXB4-206ENST00000466438 LGALS4P56470 323 aa11.76□□□□□ -0.53
HMGXB4-206ENST00000466438 MZT1Q08AG7 82 aa11.76□□□□□ -0.53
HMGXB4-206ENST00000466438 PLA1AQ53H76 456 aa11.76□□□□□ -0.53
HMGXB4-206ENST00000466438 ATPAF1Q5TC12 328 aaPredicted RBP11.76□□□□□ -0.53
HMGXB4-206ENST00000466438 DRAM2Q6UX65 266 aa11.76□□□□□ -0.53
HMGXB4-206ENST00000466438 MRPL21Q7Z2W9 205 aaKnown RBP11.76□□□□□ -0.53
HMGXB4-206ENST00000466438 CEACAM19Q7Z692 300 aa11.76□□□□□ -0.53
HMGXB4-206ENST00000466438 SBSPONQ8IVN8 264 aa11.76□□□□□ -0.53
HMGXB4-206ENST00000466438 PRSS35Q8N3Z0 413 aa11.76□□□□□ -0.53
HMGXB4-206ENST00000466438 LRRC29Q8WV35 223 aa11.76□□□□□ -0.53
HMGXB4-206ENST00000466438 ZNF799Q96GE5 643 aa11.76□□□□□ -0.53
HMGXB4-206ENST00000466438 TSC22D3Q99576 134 aa11.76□□□□□ -0.53
HMGXB4-206ENST00000466438 PBOV1Q9GZY1 135 aa11.76□□□□□ -0.53
HMGXB4-206ENST00000466438 HHLA2Q9UM44 414 aa11.76□□□□□ -0.53
HMGXB4-206ENST00000466438 FRAS1Q86XX4 4008 aa11.75□□□□□ -0.53
HMGXB4-206ENST00000466438 ZNF182P17025 639 aaPredicted RBP11.75□□□□□ -0.53
HMGXB4-206ENST00000466438 CALRP27797 417 aaKnown RBP11.75□□□□□ -0.53
HMGXB4-206ENST00000466438 MTNR1BP49286 362 aa11.75□□□□□ -0.53
HMGXB4-206ENST00000466438 ZNF121P58317 390 aaPredicted RBP11.75□□□□□ -0.53
HMGXB4-206ENST00000466438 HSD17B12Q53GQ0 312 aa11.75□□□□□ -0.53
HMGXB4-206ENST00000466438 STUMQ69YW2 141 aa11.75□□□□□ -0.53
HMGXB4-206ENST00000466438 TMEM91Q6ZNR0 172 aa11.75□□□□□ -0.53
HMGXB4-206ENST00000466438 TPRA1Q86W33 373 aa11.75□□□□□ -0.53
HMGXB4-206ENST00000466438 ELMOD2Q8IZ81 293 aa11.75□□□□□ -0.53
HMGXB4-206ENST00000466438 CCDC54Q8NEL0 328 aa11.75□□□□□ -0.53
HMGXB4-206ENST00000466438 OR52H1Q8NGJ2 320 aa11.75□□□□□ -0.53
HMGXB4-206ENST00000466438 DYNC2LI1Q8TCX1 351 aa11.75□□□□□ -0.53
HMGXB4-206ENST00000466438 PGAM5Q96HS1 289 aa11.75□□□□□ -0.53
HMGXB4-206ENST00000466438 OR14A2Q96R54 314 aa11.75□□□□□ -0.53
HMGXB4-206ENST00000466438 DNTTIP1Q9H147 329 aa11.75□□□□□ -0.53
HMGXB4-206ENST00000466438 BRD7Q9NPI1 651 aa11.75□□□□□ -0.53
HMGXB4-206ENST00000466438 C14orf119Q9NWQ9 140 aa11.75□□□□□ -0.53
HMGXB4-206ENST00000466438 MRPL15Q9P015 296 aaKnown RBP11.75□□□□□ -0.53
HMGXB4-206ENST00000466438 SLC25A10Q9UBX3 287 aaPredicted RBP11.75□□□□□ -0.53
HMGXB4-206ENST00000466438 DHDHQ9UQ10 334 aa11.75□□□□□ -0.53
HMGXB4-206ENST00000466438 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.74□□□□□ -0.53
HMGXB4-206ENST00000466438 TRBV5-5A0A0J9YX44 114 aa11.74□□□□□ -0.53
HMGXB4-206ENST00000466438 LOC107986453A0A1B0GWG9 222 aa11.74□□□□□ -0.53
HMGXB4-206ENST00000466438 FAM90A8PA6NJQ4 464 aa11.74□□□□□ -0.53
HMGXB4-206ENST00000466438 F5H5K5 113 aa11.74□□□□□ -0.53
HMGXB4-206ENST00000466438 CDRT1O95170 752 aa11.74□□□□□ -0.53
HMGXB4-206ENST00000466438 UCHL1P09936 223 aa11.74□□□□□ -0.53
HMGXB4-206ENST00000466438 ACSM4P0C7M7 580 aa11.74□□□□□ -0.53
HMGXB4-206ENST00000466438 CAV3P56539 151 aa11.74□□□□□ -0.53
HMGXB4-206ENST00000466438 RPS11P62280 158 aaKnown RBP eCLIP11.74□□□□□ -0.53
HMGXB4-206ENST00000466438 ODF4Q2M2E3 257 aa11.74□□□□□ -0.53
HMGXB4-206ENST00000466438 RSPO1Q2MKA7 263 aaPredicted RBP11.74□□□□□ -0.53
HMGXB4-206ENST00000466438 KRTAP27-1Q3LI81 207 aa11.74□□□□□ -0.53
HMGXB4-206ENST00000466438 FAM57BQ71RH2 274 aa11.74□□□□□ -0.53
HMGXB4-206ENST00000466438 COMMD2Q86X83 199 aa11.74□□□□□ -0.53
HMGXB4-206ENST00000466438 CROCCP3Q8IVE0 287 aa11.74□□□□□ -0.53
HMGXB4-206ENST00000466438 MKXQ8IYA7 352 aa11.74□□□□□ -0.53
HMGXB4-206ENST00000466438 DYNAPQ8N1N2 210 aa11.74□□□□□ -0.53
HMGXB4-206ENST00000466438 OR13C5Q8NGS8 318 aa11.74□□□□□ -0.53
HMGXB4-206ENST00000466438 SEH1LQ96EE3 360 aa11.74□□□□□ -0.53
HMGXB4-206ENST00000466438 OR10A2Q9H208 303 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms