RNA–Protein interactions for RNA: ENST00000465459.2

HLA-F-223, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-223ENST00000465459 C18orf12Q96KH6 178 aa12.21□□□□□ -0.45
HLA-F-223ENST00000465459 NEDD4LQ96PU5 975 aa12.21□□□□□ -0.45
HLA-F-223ENST00000465459 SHARPINQ9H0F6 387 aa12.21□□□□□ -0.45
HLA-F-223ENST00000465459 KCNK15Q9H427 330 aa12.21□□□□□ -0.45
HLA-F-223ENST00000465459 DOCK11Q5JSL3 2073 aa12.2□□□□□ -0.46
HLA-F-223ENST00000465459 FLNAP21333 2647 aaKnown RBP12.2□□□□□ -0.46
HLA-F-223ENST00000465459 TRBV23-1A0A0A0MS06 115 aa12.2□□□□□ -0.46
HLA-F-223ENST00000465459 A0A0A6YYH2 397 aa12.2□□□□□ -0.46
HLA-F-223ENST00000465459 A0A1B0GW55 424 aa12.2□□□□□ -0.46
HLA-F-223ENST00000465459 A6NJ64 397 aa12.2□□□□□ -0.46
HLA-F-223ENST00000465459 KIAA1324LA8MWY0 1029 aaPredicted RBP12.2□□□□□ -0.46
HLA-F-223ENST00000465459 FAM157AC9JC47 383 aa12.2□□□□□ -0.46
HLA-F-223ENST00000465459 CA11O75493 328 aa12.2□□□□□ -0.46
HLA-F-223ENST00000465459 TFF1P04155 84 aa12.2□□□□□ -0.46
HLA-F-223ENST00000465459 MSMBP08118 114 aa12.2□□□□□ -0.46
HLA-F-223ENST00000465459 DUX4L2P0CJ85 424 aa12.2□□□□□ -0.46
HLA-F-223ENST00000465459 DUX4L3P0CJ86 424 aa12.2□□□□□ -0.46
HLA-F-223ENST00000465459 DUX4L4P0CJ87 422 aa12.2□□□□□ -0.46
HLA-F-223ENST00000465459 DUX4L5P0CJ88 424 aa12.2□□□□□ -0.46
HLA-F-223ENST00000465459 DUX4L6P0CJ89 424 aa12.2□□□□□ -0.46
HLA-F-223ENST00000465459 DUX4L7P0CJ90 424 aa12.2□□□□□ -0.46
HLA-F-223ENST00000465459 ERP29P30040 261 aaKnown RBP12.2□□□□□ -0.46
HLA-F-223ENST00000465459 OR3A1P47881 315 aa12.2□□□□□ -0.46
HLA-F-223ENST00000465459 SEC61A1P61619 476 aaKnown RBP12.2□□□□□ -0.46
HLA-F-223ENST00000465459 GRK1Q15835 563 aa12.2□□□□□ -0.46
HLA-F-223ENST00000465459 PAN3Q58A45 887 aaKnown RBP12.2□□□□□ -0.46
HLA-F-223ENST00000465459 ATAD3CQ5T2N8 411 aa12.2□□□□□ -0.46
HLA-F-223ENST00000465459 CYB5R2Q6BCY4 276 aa12.2□□□□□ -0.46
HLA-F-223ENST00000465459 DUX4L9Q6RFH8 374 aaPredicted RBP12.2□□□□□ -0.46
HLA-F-223ENST00000465459 SUMF2Q8NBJ7 301 aa12.2□□□□□ -0.46
HLA-F-223ENST00000465459 RAB40AQ8WXH6 277 aa12.2□□□□□ -0.46
HLA-F-223ENST00000465459 NUDT16L1Q9BRJ7 211 aaKnown RBP12.2□□□□□ -0.46
HLA-F-223ENST00000465459 DPCDQ9BVM2 203 aaPredicted RBP12.2□□□□□ -0.46
HLA-F-223ENST00000465459 TMUB1Q9BVT8 246 aa12.2□□□□□ -0.46
HLA-F-223ENST00000465459 ABCG5Q9H222 651 aa12.2□□□□□ -0.46
HLA-F-223ENST00000465459 NCOR1P1Q9H4R4 102 aa12.2□□□□□ -0.46
HLA-F-223ENST00000465459 RHBDL2Q9NX52 303 aa12.2□□□□□ -0.46
HLA-F-223ENST00000465459 DUX4Q9UBX2 424 aa12.2□□□□□ -0.46
HLA-F-223ENST00000465459 LPAR3Q9UBY5 353 aa12.2□□□□□ -0.46
HLA-F-223ENST00000465459 HSF4Q9ULV5 492 aa12.2□□□□□ -0.46
HLA-F-223ENST00000465459 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.19□□□□□ -0.46
HLA-F-223ENST00000465459 LOC105371242A0A075B767 164 aa12.19□□□□□ -0.46
HLA-F-223ENST00000465459 TRAV20A0A0B4J274 112 aa12.19□□□□□ -0.46
HLA-F-223ENST00000465459 FOXI3A8MTJ6 420 aaPredicted RBP12.19□□□□□ -0.46
HLA-F-223ENST00000465459 MCRIP1C9JLW8 97 aa12.19□□□□□ -0.46
HLA-F-223ENST00000465459 FCN3O75636 299 aa12.19□□□□□ -0.46
HLA-F-223ENST00000465459 LIPFP07098 398 aa12.19□□□□□ -0.46
HLA-F-223ENST00000465459 IGHV4-31P0DP07 118 aa12.19□□□□□ -0.46
HLA-F-223ENST00000465459 SELLP14151 372 aa12.19□□□□□ -0.46
HLA-F-223ENST00000465459 NDUFB7P17568 137 aa12.19□□□□□ -0.46
HLA-F-223ENST00000465459 GATA3P23771 443 aa12.19□□□□□ -0.46
HLA-F-223ENST00000465459 ZFP36P26651 326 aaKnown RBP12.19□□□□□ -0.46
HLA-F-223ENST00000465459 CHATP28329 748 aa12.19□□□□□ -0.46
HLA-F-223ENST00000465459 BLVRBP30043 206 aaPredicted RBP12.19□□□□□ -0.46
HLA-F-223ENST00000465459 EFNB2P52799 333 aa12.19□□□□□ -0.46
HLA-F-223ENST00000465459 MEF2CQ06413 473 aaPredicted RBP12.19□□□□□ -0.46
HLA-F-223ENST00000465459 ARL6IP1Q15041 203 aa12.19□□□□□ -0.46
HLA-F-223ENST00000465459 PDCD1Q15116 288 aa12.19□□□□□ -0.46
HLA-F-223ENST00000465459 SIGIRRQ6IA17 410 aa12.19□□□□□ -0.46
HLA-F-223ENST00000465459 GDPD3Q7L5L3 318 aa12.19□□□□□ -0.46
HLA-F-223ENST00000465459 OR4S1Q8NGB4 309 aa12.19□□□□□ -0.46
HLA-F-223ENST00000465459 OR5H6Q8NGV6 325 aa12.19□□□□□ -0.46
HLA-F-223ENST00000465459 C8orf46Q8TAG6 207 aa12.19□□□□□ -0.46
HLA-F-223ENST00000465459 ST8SIA4Q92187 359 aa12.19□□□□□ -0.46
HLA-F-223ENST00000465459 NICN1Q9BSH3 213 aa12.19□□□□□ -0.46
HLA-F-223ENST00000465459 DCTN5Q9BTE1 182 aa12.19□□□□□ -0.46
HLA-F-223ENST00000465459 ATG5Q9H1Y0 275 aa12.19□□□□□ -0.46
HLA-F-223ENST00000465459 PEX16Q9Y5Y5 336 aa12.19□□□□□ -0.46
HLA-F-223ENST00000465459 CR1P17927 2039 aa12.19□□□□□ -0.46
HLA-F-223ENST00000465459 YLPM1P49750 1951 aaKnown RBP12.18□□□□□ -0.46
HLA-F-223ENST00000465459 MAST4O15021 2626 aa12.18□□□□□ -0.46
HLA-F-223ENST00000465459 A0A075B6Q4 140 aa12.18□□□□□ -0.46
HLA-F-223ENST00000465459 A0A0A6YYD4 124 aa12.18□□□□□ -0.46
HLA-F-223ENST00000465459 RAB27BO00194 218 aa12.18□□□□□ -0.46
HLA-F-223ENST00000465459 PHF1O43189 567 aaPredicted RBP12.18□□□□□ -0.46
HLA-F-223ENST00000465459 APOA1P02647 267 aa12.18□□□□□ -0.46
HLA-F-223ENST00000465459 INHBBP09529 407 aa12.18□□□□□ -0.46
HLA-F-223ENST00000465459 CD99P14209 185 aa12.18□□□□□ -0.46
HLA-F-223ENST00000465459 VEGFCP49767 419 aa12.18□□□□□ -0.46
HLA-F-223ENST00000465459 PLA2G7Q13093 441 aa12.18□□□□□ -0.46
HLA-F-223ENST00000465459 UBE2NLQ5JXB2 153 aa12.18□□□□□ -0.46
HLA-F-223ENST00000465459 FOXB2Q5VYV0 432 aa12.18□□□□□ -0.46
HLA-F-223ENST00000465459 BTN2A1Q7KYR7 527 aa12.18□□□□□ -0.46
HLA-F-223ENST00000465459 SAMD12Q8N8I0 201 aa12.18□□□□□ -0.46
HLA-F-223ENST00000465459 MAPK1IP1LQ8NDC0 245 aa12.18□□□□□ -0.46
HLA-F-223ENST00000465459 LY6G5BQ8NDX9 201 aa12.18□□□□□ -0.46
HLA-F-223ENST00000465459 OR10R2Q8NGX6 335 aa12.18□□□□□ -0.46
HLA-F-223ENST00000465459 DACT3Q96B18 629 aaPredicted RBP12.18□□□□□ -0.46
HLA-F-223ENST00000465459 PHF21AQ96BD5 680 aa12.18□□□□□ -0.46
HLA-F-223ENST00000465459 MSI2Q96DH6 328 aaKnown RBP12.18□□□□□ -0.46
HLA-F-223ENST00000465459 SLC25A38Q96DW6 304 aa12.18□□□□□ -0.46
HLA-F-223ENST00000465459 PPA2Q9H2U2 334 aa12.18□□□□□ -0.46
HLA-F-223ENST00000465459 PLEKHJ1Q9NW61 149 aa12.18□□□□□ -0.46
HLA-F-223ENST00000465459 RPUSD1Q9UJJ7 312 aaKnown RBP12.18□□□□□ -0.46
HLA-F-223ENST00000465459 A3GALT2U3KPV4 340 aa12.18□□□□□ -0.46
HLA-F-223ENST00000465459 ABCA1O95477 2261 aa12.17□□□□□ -0.46
HLA-F-223ENST00000465459 AKAP9Q99996 3911 aa12.17□□□□□ -0.46
HLA-F-223ENST00000465459 KIR2DS1A0A191URI9 304 aa12.17□□□□□ -0.46
HLA-F-223ENST00000465459 POM121CA8CG34 1229 aa12.17□□□□□ -0.46
HLA-F-223ENST00000465459 SMAD7O15105 426 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms