RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 MPV17LQ2QL34 196 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 PYHIN1Q6K0P9 492 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 ZNF841Q6ZN19 808 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 ZNF788Q6ZQV5 615 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 NLRC3Q7RTR2 1065 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 FGFRL1Q8N441 504 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 OR8B3Q8NGG8 313 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 OR51T1Q8NGJ9 327 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 C1orf159Q96HA4 380 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 Q96M66 194 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 OR8B2Q96RD0 313 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 SMR3AQ99954 134 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 DNTTIP1Q9H147 329 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 LPAR5Q9H1C0 372 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 BANF2Q9H503 90 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 LPAR2Q9HBW0 351 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 KAAG1Q9UBP8 84 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 GLS2Q9UI32 602 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 ITPR3Q14573 2671 aa10.83□□□□□ -0.68
VPS33A-202ENST00000451053 KIAA1324LA8MWY0 1029 aaPredicted RBP10.83□□□□□ -0.68
VPS33A-202ENST00000451053 DVL1O14640 695 aa10.83□□□□□ -0.68
VPS33A-202ENST00000451053 SIGLEC5O15389 551 aa10.83□□□□□ -0.68
VPS33A-202ENST00000451053 PHF1O43189 567 aaPredicted RBP10.83□□□□□ -0.68
VPS33A-202ENST00000451053 HAND1O96004 215 aa10.83□□□□□ -0.68
VPS33A-202ENST00000451053 ZNF16P17020 682 aaPredicted RBP10.83□□□□□ -0.68
VPS33A-202ENST00000451053 CDK2P24941 298 aa10.83□□□□□ -0.68
VPS33A-202ENST00000451053 ZFP36P26651 326 aaKnown RBP10.83□□□□□ -0.68
VPS33A-202ENST00000451053 CD40LGP29965 261 aa10.83□□□□□ -0.68
VPS33A-202ENST00000451053 IL13RA1P78552 427 aa10.83□□□□□ -0.68
VPS33A-202ENST00000451053 MRPS10P82664 201 aaKnown RBP10.83□□□□□ -0.68
VPS33A-202ENST00000451053 IKZF1Q13422 519 aa10.83□□□□□ -0.68
VPS33A-202ENST00000451053 IL18Q14116 193 aa10.83□□□□□ -0.68
VPS33A-202ENST00000451053 IL13RA2Q14627 380 aa10.83□□□□□ -0.68
VPS33A-202ENST00000451053 ZNF146Q15072 292 aa10.83□□□□□ -0.68
VPS33A-202ENST00000451053 PIGYQ3MUY2 71 aa10.83□□□□□ -0.68
VPS33A-202ENST00000451053 ESCO2Q56NI9 601 aa10.83□□□□□ -0.68
VPS33A-202ENST00000451053 SPIN3Q5JUX0 258 aa10.83□□□□□ -0.68
VPS33A-202ENST00000451053 SLC36A1Q7Z2H8 476 aa10.83□□□□□ -0.68
VPS33A-202ENST00000451053 MFSD4AQ8N468 514 aa10.83□□□□□ -0.68
VPS33A-202ENST00000451053 FAM89BQ8N5H3 189 aa10.83□□□□□ -0.68
VPS33A-202ENST00000451053 OR10R2Q8NGX6 335 aa10.83□□□□□ -0.68
VPS33A-202ENST00000451053 MSI2Q96DH6 328 aaKnown RBP10.83□□□□□ -0.68
VPS33A-202ENST00000451053 SDSLQ96GA7 329 aa10.83□□□□□ -0.68
VPS33A-202ENST00000451053 SPACA1Q9HBV2 294 aa10.83□□□□□ -0.68
VPS33A-202ENST00000451053 ST3GAL6Q9Y274 331 aa10.83□□□□□ -0.68
VPS33A-202ENST00000451053 MAB21L2Q9Y586 359 aa10.83□□□□□ -0.68
VPS33A-202ENST00000451053 V9GYH0 126 aa10.83□□□□□ -0.68
VPS33A-202ENST00000451053 YLPM1P49750 1951 aaKnown RBP10.83□□□□□ -0.68
VPS33A-202ENST00000451053 VPS13CQ709C8 3753 aa10.82□□□□□ -0.68
VPS33A-202ENST00000451053 FOSL1P15407 271 aa10.82□□□□□ -0.68
VPS33A-202ENST00000451053 VEGFCP49767 419 aa10.82□□□□□ -0.68
VPS33A-202ENST00000451053 GZMKP49863 264 aa10.82□□□□□ -0.68
VPS33A-202ENST00000451053 TAS2R20P59543 309 aa10.82□□□□□ -0.68
VPS33A-202ENST00000451053 GNB2P62879 340 aa10.82□□□□□ -0.68
VPS33A-202ENST00000451053 LCN2P80188 198 aa10.82□□□□□ -0.68
VPS33A-202ENST00000451053 COL10A1Q03692 680 aa10.82□□□□□ -0.68
VPS33A-202ENST00000451053 PLA2G7Q13093 441 aa10.82□□□□□ -0.68
VPS33A-202ENST00000451053 PDCD1Q15116 288 aa10.82□□□□□ -0.68
VPS33A-202ENST00000451053 WDR25Q64LD2 544 aaPredicted RBP10.82□□□□□ -0.68
VPS33A-202ENST00000451053 CYB5R2Q6BCY4 276 aa10.82□□□□□ -0.68
VPS33A-202ENST00000451053 GDPD1Q8N9F7 314 aa10.82□□□□□ -0.68
VPS33A-202ENST00000451053 LINC01356Q8N9X3 169 aa10.82□□□□□ -0.68
VPS33A-202ENST00000451053 ZNRF1Q8ND25 227 aa10.82□□□□□ -0.68
VPS33A-202ENST00000451053 TMEM185AQ8NFB2 350 aa10.82□□□□□ -0.68
VPS33A-202ENST00000451053 MED30Q96HR3 178 aa10.82□□□□□ -0.68
VPS33A-202ENST00000451053 SOSTQ9BQB4 213 aa10.82□□□□□ -0.68
VPS33A-202ENST00000451053 SSBP3Q9BWW4 388 aaPredicted RBP10.82□□□□□ -0.68
VPS33A-202ENST00000451053 ZNF581Q9P0T4 197 aa10.82□□□□□ -0.68
VPS33A-202ENST00000451053 CLN8Q9UBY8 286 aa10.82□□□□□ -0.68
VPS33A-202ENST00000451053 TRAV18A0A075B6X5 111 aa10.81□□□□□ -0.68
VPS33A-202ENST00000451053 A8MXK9 166 aa10.81□□□□□ -0.68
VPS33A-202ENST00000451053 B4DSR2 109 aa10.81□□□□□ -0.68
VPS33A-202ENST00000451053 RAB27BO00194 218 aa10.81□□□□□ -0.68
VPS33A-202ENST00000451053 SIRPB1O00241 398 aa10.81□□□□□ -0.68
VPS33A-202ENST00000451053 NDUFB3O43676 98 aa10.81□□□□□ -0.68
VPS33A-202ENST00000451053 OR2H2O95918 312 aa10.81□□□□□ -0.68
VPS33A-202ENST00000451053 GSTP1P09211 210 aaKnown RBP10.81□□□□□ -0.68
VPS33A-202ENST00000451053 GABRR1P24046 479 aa10.81□□□□□ -0.68
VPS33A-202ENST00000451053 BLVRBP30043 206 aaPredicted RBP10.81□□□□□ -0.68
VPS33A-202ENST00000451053 PPP5CP53041 499 aa10.81□□□□□ -0.68
VPS33A-202ENST00000451053 SCN1BQ07699 218 aa10.81□□□□□ -0.68
VPS33A-202ENST00000451053 PYDC2Q56P42 97 aa10.81□□□□□ -0.68
VPS33A-202ENST00000451053 Q6P435 159 aa10.81□□□□□ -0.68
VPS33A-202ENST00000451053 ZNF561Q8N587 486 aa10.81□□□□□ -0.68
VPS33A-202ENST00000451053 ASCC1Q8N9N2 400 aaKnown RBP10.81□□□□□ -0.68
VPS33A-202ENST00000451053 CHST4Q8NCG5 386 aa10.81□□□□□ -0.68
VPS33A-202ENST00000451053 ST8SIA4Q92187 359 aa10.81□□□□□ -0.68
VPS33A-202ENST00000451053 BORCS5Q969J3 196 aa10.81□□□□□ -0.68
VPS33A-202ENST00000451053 RAB3CQ96E17 227 aa10.81□□□□□ -0.68
VPS33A-202ENST00000451053 NEDD4LQ96PU5 975 aa10.81□□□□□ -0.68
VPS33A-202ENST00000451053 CCDC32Q9BV29 185 aa10.81□□□□□ -0.68
VPS33A-202ENST00000451053 SEBOXQ9HB31 216 aaPredicted RBP10.81□□□□□ -0.68
VPS33A-202ENST00000451053 SLC25A10Q9UBX3 287 aaPredicted RBP10.81□□□□□ -0.68
VPS33A-202ENST00000451053 MRPS7Q9Y2R9 242 aaKnown RBP10.81□□□□□ -0.68
VPS33A-202ENST00000451053 CREBBPQ92793 2442 aa10.81□□□□□ -0.68
VPS33A-202ENST00000451053 ABCA2Q9BZC7 2435 aa10.81□□□□□ -0.68
VPS33A-202ENST00000451053 A0A0G2JMP0 313 aa10.8□□□□□ -0.68
VPS33A-202ENST00000451053 A0A0X1KG70 313 aa10.8□□□□□ -0.68
VPS33A-202ENST00000451053 TMEM82A0PJX8 343 aa10.8□□□□□ -0.68
VPS33A-202ENST00000451053 C22orf46C9J442 243 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms