RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 SAV1Q9H4B6 383 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 SYNDIG1Q9H7V2 258 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 C12orf10Q9HB07 376 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 BATF3Q9NR55 127 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 SIRT7Q9NRC8 400 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 SLC2A8Q9NY64 477 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 USE1Q9NZ43 259 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 TAC3Q9UHF0 121 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 ING4Q9UNL4 249 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 STARD10Q9Y365 291 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 TMED5Q9Y3A6 229 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 CSDC2Q9Y534 153 aaKnown RBP2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 AP4S1Q9Y587 144 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 RFNGQ9Y644 331 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 MTCH2Q9Y6C9 303 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 LAMA2P24043 3122 aaKnown RBP2.09□□□□□ -2.08
HMGB1P11-201ENST00000413899 DSPPQ9NZW4 1301 aa2.09□□□□□ -2.08
HMGB1P11-201ENST00000413899 NCKAP5O14513 1909 aa2.09□□□□□ -2.08
HMGB1P11-201ENST00000413899 LAMA3Q16787 3333 aa2.09□□□□□ -2.08
HMGB1P11-201ENST00000413899 ARID1AO14497 2285 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 PHF3Q92576 2039 aaKnown RBP2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 COLCA2A8K830 154 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 SERPINE3A8MV23 424 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 F6UB75 175 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 CXCR6O00574 342 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 ZNF207O43670 478 aaKnown RBP2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 DPM1O60762 260 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 DNAJB6O75190 326 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 VAMP5O95183 116 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 SNAP29O95721 258 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 SERPINA1P01009 418 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 STATHP02808 62 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 OPN1SWP03999 348 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 IL6P05231 212 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 IL3P08700 152 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 C1GALT1C1LP0DN25 315 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 PRPS1L1P21108 318 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 ELK4P28324 431 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 S100A3P33764 101 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 MAS1LP35410 378 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 CEACAM6P40199 344 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 GABRA4P48169 554 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 HSPA13P48723 471 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 UBE2IP63279 158 aaKnown RBP2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 ECH1Q13011 328 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 MAB21L1Q13394 359 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 RGNQ15493 299 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 MAJINQ3KP22 176 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 LIN52Q52LA3 116 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 SPIN4Q56A73 249 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 THEM4Q5T1C6 240 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 CCNJQ5T5M9 372 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 LCE1BQ5T7P3 118 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 SAXO2Q658L1 398 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 XAF1Q6GPH4 301 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 GLYATQ6IB77 296 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 MED27Q6P2C8 311 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 FAHD1Q6P587 224 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 ARL9Q6T311 187 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 TMEM107Q6UX40 140 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 ZNF836Q6ZNA1 936 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 NCCRP1Q6ZVX7 275 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 OLIG3Q7RTU3 272 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 VTCN1Q7Z7D3 282 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 HMGN2P46Q86SG4 172 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 CYP4Z1Q86W10 505 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 C2orf73Q8N5S3 287 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 RNF182Q8N6D2 247 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 C16orf78Q8WTQ4 265 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 PHF10Q8WUB8 498 aaKnown RBP2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 APH1BQ8WW43 257 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 PATE1Q8WXA2 126 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 TFGQ92734 400 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 MAL2Q969L2 176 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 RAD51AP1Q96B01 352 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 TM4SF18Q96CE8 201 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 MS4A6EQ96DS6 147 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 CENPNQ96H22 339 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 ZNF514Q96K75 400 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 CNBD2Q96M20 576 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 OR2M4Q96R27 311 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 WFDC6Q9BQY6 131 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 CHID1Q9BWS9 393 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 OSBPL11Q9BXB4 747 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 PKIBQ9C010 78 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 NAA50Q9GZZ1 169 aaKnown RBP2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 RACGAP1Q9H0H5 632 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 TCEAL2Q9H3H9 227 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 ELOVL6Q9H5J4 265 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 XKR8Q9H6D3 395 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 KIR3DX1Q9H7L2 352 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 METTL7AQ9H8H3 244 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 TPT1P8Q9HAU6 139 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 GID8Q9NWU2 228 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 FBXL12Q9NXK8 326 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 VPS29Q9UBQ0 182 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 CES1P1Q9UKY3 287 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 ZNF835Q9Y2P0 537 aa2.08□□□□□ -2.08
HMGB1P11-201ENST00000413899 CEP290O15078 2479 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms