RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 ENTHD1Q8IYW4 607 aa12.43□□□□□ -0.42
SNCA-205ENST00000394991 STPG2Q8N412 459 aa12.43□□□□□ -0.42
SNCA-205ENST00000394991 COMMD1Q8N668 190 aa12.43□□□□□ -0.42
SNCA-205ENST00000394991 OR5M8Q8NGP6 311 aa12.43□□□□□ -0.42
SNCA-205ENST00000394991 OR56B4Q8NH76 319 aa12.43□□□□□ -0.42
SNCA-205ENST00000394991 PYDC1Q8WXC3 89 aa12.43□□□□□ -0.42
SNCA-205ENST00000394991 CORO2AQ92828 525 aa12.43□□□□□ -0.42
SNCA-205ENST00000394991 CREB3L1Q96BA8 519 aa12.43□□□□□ -0.42
SNCA-205ENST00000394991 TAS2R3Q9NYW6 316 aa12.43□□□□□ -0.42
SNCA-205ENST00000394991 TMEM14AQ9Y6G1 99 aa12.43□□□□□ -0.42
SNCA-205ENST00000394991 STARD9Q9P2P6 4700 aa12.43□□□□□ -0.42
SNCA-205ENST00000394991 A0A087X0M5 115 aa12.42□□□□□ -0.42
SNCA-205ENST00000394991 TRBV2A0A0J9YWF9 115 aa12.42□□□□□ -0.42
SNCA-205ENST00000394991 A0A1B0GX30 115 aa12.42□□□□□ -0.42
SNCA-205ENST00000394991 A0A1W2PPI3 338 aa12.42□□□□□ -0.42
SNCA-205ENST00000394991 LINC01548A6NM66 108 aa12.42□□□□□ -0.42
SNCA-205ENST00000394991 SEC14L6B5MCN3 397 aa12.42□□□□□ -0.42
SNCA-205ENST00000394991 TOR1AO14656 332 aa12.42□□□□□ -0.42
SNCA-205ENST00000394991 IGHG2P01859 326 aa12.42□□□□□ -0.42
SNCA-205ENST00000394991 RPLP1P05386 114 aaKnown RBP12.42□□□□□ -0.42
SNCA-205ENST00000394991 SLC35B1P78383 322 aa12.42□□□□□ -0.42
SNCA-205ENST00000394991 ZNF322Q6U7Q0 402 aaPredicted RBP12.42□□□□□ -0.42
SNCA-205ENST00000394991 SLC35E3Q7Z769 313 aa12.42□□□□□ -0.42
SNCA-205ENST00000394991 SBSPONQ8IVN8 264 aa12.42□□□□□ -0.42
SNCA-205ENST00000394991 DCLRE1BQ9H816 532 aa12.42□□□□□ -0.42
SNCA-205ENST00000394991 MRM2Q9UI43 246 aaKnown RBP12.42□□□□□ -0.42
SNCA-205ENST00000394991 ZNF256Q9Y2P7 627 aaPredicted RBP12.42□□□□□ -0.42
SNCA-205ENST00000394991 SAC3D1A6NKF1 404 aa12.41□□□□□ -0.42
SNCA-205ENST00000394991 FGF16O43320 207 aa12.41□□□□□ -0.42
SNCA-205ENST00000394991 LYL1P12980 280 aa12.41□□□□□ -0.42
SNCA-205ENST00000394991 TMEM11P17152 192 aa12.41□□□□□ -0.42
SNCA-205ENST00000394991 PRKACAP17612 351 aa12.41□□□□□ -0.42
SNCA-205ENST00000394991 FUT6P51993 359 aa12.41□□□□□ -0.42
SNCA-205ENST00000394991 CXCR4P61073 352 aa12.41□□□□□ -0.42
SNCA-205ENST00000394991 AESQ08117 197 aa12.41□□□□□ -0.42
SNCA-205ENST00000394991 DOC2BQ14184 412 aa12.41□□□□□ -0.42
SNCA-205ENST00000394991 DIAPH2-AS1Q14236 149 aa12.41□□□□□ -0.42
SNCA-205ENST00000394991 KPNB1Q14974 876 aaKnown RBP12.41□□□□□ -0.42
SNCA-205ENST00000394991 ODF4Q2M2E3 257 aa12.41□□□□□ -0.42
SNCA-205ENST00000394991 Q8IYB0 196 aa12.41□□□□□ -0.42
SNCA-205ENST00000394991 FAM58AQ8N1B3 248 aa12.41□□□□□ -0.42
SNCA-205ENST00000394991 DRAM1Q8N682 238 aa12.41□□□□□ -0.42
SNCA-205ENST00000394991 TOMM40LQ969M1 308 aa12.41□□□□□ -0.42
SNCA-205ENST00000394991 RPEQ96AT9 228 aa12.41□□□□□ -0.42
SNCA-205ENST00000394991 BORCS8Q96FH0 119 aa12.41□□□□□ -0.42
SNCA-205ENST00000394991 CENPNQ96H22 339 aaPredicted RBP12.41□□□□□ -0.42
SNCA-205ENST00000394991 COQ2Q96H96 371 aa12.41□□□□□ -0.42
SNCA-205ENST00000394991 CNN2Q99439 309 aaKnown RBP12.41□□□□□ -0.42
SNCA-205ENST00000394991 CHST5Q9GZS9 411 aa12.41□□□□□ -0.42
SNCA-205ENST00000394991 PLEKHA1Q9HB21 404 aa12.41□□□□□ -0.42
SNCA-205ENST00000394991 SNX5Q9Y5X3 404 aa12.41□□□□□ -0.42
SNCA-205ENST00000394991 ODAMA1E959 279 aa12.4□□□□□ -0.42
SNCA-205ENST00000394991 OR2H2O95918 312 aa12.4□□□□□ -0.42
SNCA-205ENST00000394991 PTGFRP43088 359 aa12.4□□□□□ -0.42
SNCA-205ENST00000394991 POU3F4P49335 361 aa12.4□□□□□ -0.42
SNCA-205ENST00000394991 PRRX1P54821 245 aa12.4□□□□□ -0.42
SNCA-205ENST00000394991 ACTR3P61158 418 aa12.4□□□□□ -0.42
SNCA-205ENST00000394991 HNF4GQ14541 408 aa12.4□□□□□ -0.42
SNCA-205ENST00000394991 KIR2DS1Q14954 304 aa12.4□□□□□ -0.42
SNCA-205ENST00000394991 C17orf58Q2M2W7 97 aa12.4□□□□□ -0.42
SNCA-205ENST00000394991 OR8U1Q8NH10 309 aa12.4□□□□□ -0.42
SNCA-205ENST00000394991 PRRG3Q9BZD7 231 aa12.4□□□□□ -0.42
SNCA-205ENST00000394991 GABARAPL1Q9H0R8 117 aa12.4□□□□□ -0.42
SNCA-205ENST00000394991 OAZ3Q9UMX2 235 aa12.4□□□□□ -0.42
SNCA-205ENST00000394991 SMAD5-AS1Q9Y6J3 95 aa12.4□□□□□ -0.42
SNCA-205ENST00000394991 M0R129 80 aa12.39□□□□□ -0.43
SNCA-205ENST00000394991 PRKYO43930 277 aa12.39□□□□□ -0.43
SNCA-205ENST00000394991 GATBO75879 557 aaKnown RBP12.39□□□□□ -0.43
SNCA-205ENST00000394991 NFYBP25208 207 aa12.39□□□□□ -0.43
SNCA-205ENST00000394991 EPHA2P29317 976 aa12.39□□□□□ -0.43
SNCA-205ENST00000394991 CDC42P60953 191 aa12.39□□□□□ -0.43
SNCA-205ENST00000394991 HES1Q14469 280 aa12.39□□□□□ -0.43
SNCA-205ENST00000394991 SPIN3Q5JUX0 258 aa12.39□□□□□ -0.43
SNCA-205ENST00000394991 KDM4DQ6B0I6 523 aa12.39□□□□□ -0.43
SNCA-205ENST00000394991 ZFAND6Q6FIF0 208 aa12.39□□□□□ -0.43
SNCA-205ENST00000394991 TEX38Q6PEX7 206 aa12.39□□□□□ -0.43
SNCA-205ENST00000394991 BCDIN3DQ7Z5W3 292 aaKnown RBP12.39□□□□□ -0.43
SNCA-205ENST00000394991 FOXRED2Q8IWF2 684 aa12.39□□□□□ -0.43
SNCA-205ENST00000394991 SLC35F2Q8IXU6 374 aa12.39□□□□□ -0.43
SNCA-205ENST00000394991 OR4D6Q8NGJ1 314 aa12.39□□□□□ -0.43
SNCA-205ENST00000394991 OR9G1Q8NH87 305 aa12.39□□□□□ -0.43
SNCA-205ENST00000394991 LEAP2Q969E1 77 aa12.39□□□□□ -0.43
SNCA-205ENST00000394991 KIRREL1Q96J84 757 aa12.39□□□□□ -0.43
SNCA-205ENST00000394991 CIB1Q99828 191 aa12.39□□□□□ -0.43
SNCA-205ENST00000394991 ADGRL4Q9HBW9 690 aa12.39□□□□□ -0.43
SNCA-205ENST00000394991 PALMDQ9NP74 551 aa12.39□□□□□ -0.43
SNCA-205ENST00000394991 PCDHB16Q9NRJ7 776 aa12.39□□□□□ -0.43
SNCA-205ENST00000394991 H2AFY2Q9P0M6 372 aaPredicted RBP12.39□□□□□ -0.43
SNCA-205ENST00000394991 ENOPH1Q9UHY7 261 aa12.39□□□□□ -0.43
SNCA-205ENST00000394991 GLS2Q9UI32 602 aa12.39□□□□□ -0.43
SNCA-205ENST00000394991 GSTK1Q9Y2Q3 226 aa12.39□□□□□ -0.43
SNCA-205ENST00000394991 SYT7O43581 403 aa12.38□□□□□ -0.43
SNCA-205ENST00000394991 RPP14O95059 124 aaKnown RBP12.38□□□□□ -0.43
SNCA-205ENST00000394991 LY86O95711 162 aa12.38□□□□□ -0.43
SNCA-205ENST00000394991 IGKV1D-33P01593 117 aa12.38□□□□□ -0.43
SNCA-205ENST00000394991 IGKV1-33P01594 117 aa12.38□□□□□ -0.43
SNCA-205ENST00000394991 IGHV3-7P01780 117 aa12.38□□□□□ -0.43
SNCA-205ENST00000394991 CDX1P47902 265 aaPredicted RBP12.38□□□□□ -0.43
SNCA-205ENST00000394991 FHL3Q13643 280 aa12.38□□□□□ -0.43
SNCA-205ENST00000394991 PNLIPRP3Q17RR3 467 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms