RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 POU3F4P49335 361 aa11.58□□□□□ -0.56
PNKP-218ENST00000625299 PRRX1P54821 245 aa11.58□□□□□ -0.56
PNKP-218ENST00000625299 CXCR4P61073 352 aa11.58□□□□□ -0.56
PNKP-218ENST00000625299 HNF4GQ14541 408 aa11.58□□□□□ -0.56
PNKP-218ENST00000625299 UBE2V2Q15819 145 aa11.58□□□□□ -0.56
PNKP-218ENST00000625299 ZNF322Q6U7Q0 402 aaPredicted RBP11.58□□□□□ -0.56
PNKP-218ENST00000625299 ENTHD1Q8IYW4 607 aa11.58□□□□□ -0.56
PNKP-218ENST00000625299 OR5M8Q8NGP6 311 aa11.58□□□□□ -0.56
PNKP-218ENST00000625299 OR56B4Q8NH76 319 aa11.58□□□□□ -0.56
PNKP-218ENST00000625299 TOMM40LQ969M1 308 aa11.58□□□□□ -0.56
PNKP-218ENST00000625299 RPEQ96AT9 228 aa11.58□□□□□ -0.56
PNKP-218ENST00000625299 BORCS8Q96FH0 119 aa11.58□□□□□ -0.56
PNKP-218ENST00000625299 CNN2Q99439 309 aaKnown RBP11.58□□□□□ -0.56
PNKP-218ENST00000625299 TEX12Q9BXU0 123 aa11.58□□□□□ -0.56
PNKP-218ENST00000625299 DHRS7CA6NNS2 312 aa11.57□□□□□ -0.56
PNKP-218ENST00000625299 SEC14L6B5MCN3 397 aa11.57□□□□□ -0.56
PNKP-218ENST00000625299 E2F6O75461 281 aa11.57□□□□□ -0.56
PNKP-218ENST00000625299 GATBO75879 557 aaKnown RBP11.57□□□□□ -0.56
PNKP-218ENST00000625299 RPP14O95059 124 aaKnown RBP11.57□□□□□ -0.56
PNKP-218ENST00000625299 OSMP13725 252 aa11.57□□□□□ -0.56
PNKP-218ENST00000625299 TMEM11P17152 192 aa11.57□□□□□ -0.56
PNKP-218ENST00000625299 BCL3P20749 454 aa11.57□□□□□ -0.56
PNKP-218ENST00000625299 NFYBP25208 207 aa11.57□□□□□ -0.56
PNKP-218ENST00000625299 ERP29P30040 261 aaKnown RBP11.57□□□□□ -0.56
PNKP-218ENST00000625299 PTGFRP43088 359 aa11.57□□□□□ -0.56
PNKP-218ENST00000625299 FUT6P51993 359 aa11.57□□□□□ -0.56
PNKP-218ENST00000625299 CDK5Q00535 292 aa11.57□□□□□ -0.56
PNKP-218ENST00000625299 AESQ08117 197 aa11.57□□□□□ -0.56
PNKP-218ENST00000625299 SLC35E3Q7Z769 313 aa11.57□□□□□ -0.56
PNKP-218ENST00000625299 Q8IYB0 196 aa11.57□□□□□ -0.56
PNKP-218ENST00000625299 FAM58AQ8N1B3 248 aa11.57□□□□□ -0.56
PNKP-218ENST00000625299 COMMD1Q8N668 190 aa11.57□□□□□ -0.56
PNKP-218ENST00000625299 C5orf56Q8N8D9 126 aa11.57□□□□□ -0.56
PNKP-218ENST00000625299 OR4D6Q8NGJ1 314 aa11.57□□□□□ -0.56
PNKP-218ENST00000625299 RCHY1Q96PM5 261 aa11.57□□□□□ -0.56
PNKP-218ENST00000625299 TVP23BQ9NYZ1 205 aa11.57□□□□□ -0.56
PNKP-218ENST00000625299 SNX5Q9Y5X3 404 aa11.57□□□□□ -0.56
PNKP-218ENST00000625299 LY6LH3BQJ8 138 aa11.56□□□□□ -0.56
PNKP-218ENST00000625299 GNGT2O14610 69 aa11.56□□□□□ -0.56
PNKP-218ENST00000625299 SYT7O43581 403 aa11.56□□□□□ -0.56
PNKP-218ENST00000625299 ENTPD6O75354 484 aa11.56□□□□□ -0.56
PNKP-218ENST00000625299 CYB5AP00167 134 aa11.56□□□□□ -0.56
PNKP-218ENST00000625299 CST1P01037 141 aa11.56□□□□□ -0.56
PNKP-218ENST00000625299 IGHV3-7P01780 117 aa11.56□□□□□ -0.56
PNKP-218ENST00000625299 LYL1P12980 280 aa11.56□□□□□ -0.56
PNKP-218ENST00000625299 CHATP28329 748 aa11.56□□□□□ -0.56
PNKP-218ENST00000625299 CD34P28906 385 aa11.56□□□□□ -0.56
PNKP-218ENST00000625299 GLIPR1P48060 266 aa11.56□□□□□ -0.56
PNKP-218ENST00000625299 ACTR3P61158 418 aa11.56□□□□□ -0.56
PNKP-218ENST00000625299 UTF1Q5T230 341 aa11.56□□□□□ -0.56
PNKP-218ENST00000625299 LCNL1Q6ZST4 164 aa11.56□□□□□ -0.56
PNKP-218ENST00000625299 TMEM179BQ7Z7N9 219 aa11.56□□□□□ -0.56
PNKP-218ENST00000625299 DHFR2Q86XF0 187 aa11.56□□□□□ -0.56
PNKP-218ENST00000625299 FOXRED2Q8IWF2 684 aa11.56□□□□□ -0.56
PNKP-218ENST00000625299 STPG2Q8N412 459 aa11.56□□□□□ -0.56
PNKP-218ENST00000625299 DRAM1Q8N682 238 aa11.56□□□□□ -0.56
PNKP-218ENST00000625299 OR8U1Q8NH10 309 aa11.56□□□□□ -0.56
PNKP-218ENST00000625299 ZNF556Q9HAH1 456 aa11.56□□□□□ -0.56
PNKP-218ENST00000625299 EXOSC4Q9NPD3 245 aaKnown RBP11.56□□□□□ -0.56
PNKP-218ENST00000625299 ARL8BQ9NVJ2 186 aa11.56□□□□□ -0.56
PNKP-218ENST00000625299 NDE1Q9NXR1 346 aa11.56□□□□□ -0.56
PNKP-218ENST00000625299 TAS2R3Q9NYW6 316 aa11.56□□□□□ -0.56
PNKP-218ENST00000625299 TAGLN3Q9UI15 199 aa11.56□□□□□ -0.56
PNKP-218ENST00000625299 ZNF256Q9Y2P7 627 aaPredicted RBP11.56□□□□□ -0.56
PNKP-218ENST00000625299 GSTK1Q9Y2Q3 226 aa11.56□□□□□ -0.56
PNKP-218ENST00000625299 LYSTQ99698 3801 aa11.56□□□□□ -0.56
PNKP-218ENST00000625299 DNAH1Q9P2D7 4330 aa11.55□□□□□ -0.56
PNKP-218ENST00000625299 TRBV2A0A0J9YWF9 115 aa11.55□□□□□ -0.56
PNKP-218ENST00000625299 LCE6AA0A183 80 aa11.55□□□□□ -0.56
PNKP-218ENST00000625299 FUOMA2VDF0 154 aa11.55□□□□□ -0.56
PNKP-218ENST00000625299 OOSP1A8MZH6 123 aa11.55□□□□□ -0.56
PNKP-218ENST00000625299 OR2H2O95918 312 aa11.55□□□□□ -0.56
PNKP-218ENST00000625299 RPLP1P05386 114 aaKnown RBP11.55□□□□□ -0.56
PNKP-218ENST00000625299 ZNF146Q15072 292 aa11.55□□□□□ -0.56
PNKP-218ENST00000625299 ZNF260Q3ZCT1 412 aa11.55□□□□□ -0.56
PNKP-218ENST00000625299 SPATS1Q496A3 300 aa11.55□□□□□ -0.56
PNKP-218ENST00000625299 SLC35F2Q8IXU6 374 aa11.55□□□□□ -0.56
PNKP-218ENST00000625299 HS3ST5Q8IZT8 346 aa11.55□□□□□ -0.56
PNKP-218ENST00000625299 CHST5Q9GZS9 411 aa11.55□□□□□ -0.56
PNKP-218ENST00000625299 DCLRE1BQ9H816 532 aa11.55□□□□□ -0.56
PNKP-218ENST00000625299 MRM2Q9UI43 246 aaKnown RBP11.55□□□□□ -0.56
PNKP-218ENST00000625299 ODAMA1E959 279 aa11.54□□□□□ -0.56
PNKP-218ENST00000625299 ZNF670-ZNF695F2Z2N8 137 aa11.54□□□□□ -0.56
PNKP-218ENST00000625299 SH2D1BO14796 132 aa11.54□□□□□ -0.56
PNKP-218ENST00000625299 SERPINA3P01011 423 aa11.54□□□□□ -0.56
PNKP-218ENST00000625299 CCL1P22362 96 aa11.54□□□□□ -0.56
PNKP-218ENST00000625299 CDC42P60953 191 aa11.54□□□□□ -0.56
PNKP-218ENST00000625299 SCN1BQ07699 218 aa11.54□□□□□ -0.56
PNKP-218ENST00000625299 GK3PQ14409 553 aa11.54□□□□□ -0.56
PNKP-218ENST00000625299 SPIN3Q5JUX0 258 aa11.54□□□□□ -0.56
PNKP-218ENST00000625299 ZFAND6Q6FIF0 208 aa11.54□□□□□ -0.56
PNKP-218ENST00000625299 TEX38Q6PEX7 206 aa11.54□□□□□ -0.56
PNKP-218ENST00000625299 BCDIN3DQ7Z5W3 292 aaKnown RBP11.54□□□□□ -0.56
PNKP-218ENST00000625299 THNSL2Q86YJ6 484 aa11.54□□□□□ -0.56
PNKP-218ENST00000625299 SBSPONQ8IVN8 264 aa11.54□□□□□ -0.56
PNKP-218ENST00000625299 YIPF7Q8N8F6 280 aa11.54□□□□□ -0.56
PNKP-218ENST00000625299 CORO2AQ92828 525 aa11.54□□□□□ -0.56
PNKP-218ENST00000625299 LEAP2Q969E1 77 aa11.54□□□□□ -0.56
PNKP-218ENST00000625299 HRASLS5Q96KN8 279 aa11.54□□□□□ -0.56
PNKP-218ENST00000625299 ADI1Q9BV57 179 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms