RNA–Protein interactions for RNA: ENST00000558907.5

RNF31-208, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-208	ENST00000558907	P2RX3	P56373	397 aa		13.26	□□□□□ -0.29
RNF31-208	ENST00000558907	DEFA6	Q01524	100 aa		13.26	□□□□□ -0.29
RNF31-208	ENST00000558907	MRPL28	Q13084	256 aa	Known RBP	13.26	□□□□□ -0.29
RNF31-208	ENST00000558907	KLHL22	Q53GT1	634 aa		13.26	□□□□□ -0.29
RNF31-208	ENST00000558907	LDLRAD2	Q5SZI1	272 aa		13.26	□□□□□ -0.29
RNF31-208	ENST00000558907	OR5D14	Q8NGL3	314 aa		13.26	□□□□□ -0.29
RNF31-208	ENST00000558907	OR5AK2	Q8NH90	309 aa		13.26	□□□□□ -0.29
RNF31-208	ENST00000558907	TSEN15	Q8WW01	171 aa	Known RBP	13.26	□□□□□ -0.29
RNF31-208	ENST00000558907	APH1B	Q8WW43	257 aa		13.26	□□□□□ -0.29
RNF31-208	ENST00000558907	NKX3-1	Q99801	234 aa	Predicted RBP	13.26	□□□□□ -0.29
RNF31-208	ENST00000558907	PDCD1LG2	Q9BQ51	273 aa		13.26	□□□□□ -0.29
RNF31-208	ENST00000558907	NPFFR1	Q9GZQ6	430 aa		13.26	□□□□□ -0.29
RNF31-208	ENST00000558907	COMMD4	Q9H0A8	199 aa		13.26	□□□□□ -0.29
RNF31-208	ENST00000558907	RANBP3	Q9H6Z4	567 aa	Predicted RBP	13.26	□□□□□ -0.29
RNF31-208	ENST00000558907	ABCB10	Q9NRK6	738 aa		13.26	□□□□□ -0.29
RNF31-208	ENST00000558907	DHDH	Q9UQ10	334 aa		13.26	□□□□□ -0.29
RNF31-208	ENST00000558907	PCDHGB5	Q9Y5G0	923 aa		13.26	□□□□□ -0.29
RNF31-208	ENST00000558907	SESN1	Q9Y6P5	492 aa		13.26	□□□□□ -0.29
RNF31-208	ENST00000558907	TSPAN15	O95858	294 aa		13.25	□□□□□ -0.29
RNF31-208	ENST00000558907	RPSA	P08865	295 aa	Known RBP	13.25	□□□□□ -0.29
RNF31-208	ENST00000558907	CCDC159	P0C7I6	412 aa		13.25	□□□□□ -0.29
RNF31-208	ENST00000558907	TMEM225B	P0DP42	221 aa		13.25	□□□□□ -0.29
RNF31-208	ENST00000558907	ERP29	P30040	261 aa	Known RBP	13.25	□□□□□ -0.29
RNF31-208	ENST00000558907	EFNB2	P52799	333 aa		13.25	□□□□□ -0.29
RNF31-208	ENST00000558907	SCN1B	Q07699	218 aa		13.25	□□□□□ -0.29
RNF31-208	ENST00000558907	SERPINA12	Q8IW75	414 aa		13.25	□□□□□ -0.29
RNF31-208	ENST00000558907	SAXO1	Q8IYX7	474 aa		13.25	□□□□□ -0.29
RNF31-208	ENST00000558907	ZNF555	Q8NEP9	628 aa		13.25	□□□□□ -0.29
RNF31-208	ENST00000558907	OR2T6	Q8NHC8	308 aa		13.25	□□□□□ -0.29
RNF31-208	ENST00000558907	MRPS18A	Q9NVS2	196 aa	Known RBP	13.25	□□□□□ -0.29
RNF31-208	ENST00000558907	PKD1L1	Q8TDX9	2849 aa		13.25	□□□□□ -0.29
RNF31-208	ENST00000558907	IGHV2-26	A0A0B4J1V2	119 aa		13.24	□□□□□ -0.29
RNF31-208	ENST00000558907	MEGF11	A6BM72	1044 aa		13.24	□□□□□ -0.29
RNF31-208	ENST00000558907	SULT1B1	O43704	296 aa		13.24	□□□□□ -0.29
RNF31-208	ENST00000558907	MMP23A	O75900	390 aa		13.24	□□□□□ -0.29
RNF31-208	ENST00000558907	ZNF44	P15621	663 aa		13.24	□□□□□ -0.29
RNF31-208	ENST00000558907	GTF2A1	P52655	376 aa	Predicted RBP	13.24	□□□□□ -0.29
RNF31-208	ENST00000558907	IL18R1	Q13478	541 aa		13.24	□□□□□ -0.29
RNF31-208	ENST00000558907	HERPUD1	Q15011	391 aa		13.24	□□□□□ -0.29
RNF31-208	ENST00000558907	KISS1	Q15726	138 aa		13.24	□□□□□ -0.29
RNF31-208	ENST00000558907	SMN1	Q16637	294 aa	Known RBP	13.24	□□□□□ -0.29
RNF31-208	ENST00000558907	LPCAT4	Q643R3	524 aa		13.24	□□□□□ -0.29
RNF31-208	ENST00000558907	C11orf88	Q6PI97	169 aa		13.24	□□□□□ -0.29
RNF31-208	ENST00000558907		Q6ZTK2	550 aa		13.24	□□□□□ -0.29
RNF31-208	ENST00000558907	TMEM219	Q86XT9	240 aa		13.24	□□□□□ -0.29
RNF31-208	ENST00000558907	PARP16	Q8N5Y8	322 aa		13.24	□□□□□ -0.29
RNF31-208	ENST00000558907	NDNF	Q8TB73	568 aa		13.24	□□□□□ -0.29
RNF31-208	ENST00000558907	RPS4Y2	Q8TD47	263 aa		13.24	□□□□□ -0.29
RNF31-208	ENST00000558907	TMEM133	Q9H2Q1	129 aa		13.24	□□□□□ -0.29
RNF31-208	ENST00000558907	RHOF	Q9HBH0	211 aa		13.24	□□□□□ -0.29
RNF31-208	ENST00000558907	SMPD3	Q9NY59	655 aa	Predicted RBP	13.24	□□□□□ -0.29
RNF31-208	ENST00000558907	FOXJ3	Q9UPW0	622 aa		13.24	□□□□□ -0.29
RNF31-208	ENST00000558907	TCF19	Q9Y242	345 aa		13.24	□□□□□ -0.29
RNF31-208	ENST00000558907	UBE2J1	Q9Y385	318 aa	Predicted RBP	13.24	□□□□□ -0.29
RNF31-208	ENST00000558907	HILPDA	Q9Y5L2	63 aa		13.24	□□□□□ -0.29
RNF31-208	ENST00000558907	TRRAP	Q9Y4A5	3859 aa		13.23	□□□□□ -0.29
RNF31-208	ENST00000558907	TRGV10	A0A0A0MS01	117 aa		13.23	□□□□□ -0.29
RNF31-208	ENST00000558907	FUOM	A2VDF0	154 aa		13.23	□□□□□ -0.29
RNF31-208	ENST00000558907	WBP4	O75554	376 aa	Known RBP	13.23	□□□□□ -0.29
RNF31-208	ENST00000558907	ALX3	O95076	343 aa		13.23	□□□□□ -0.29
RNF31-208	ENST00000558907	LIMS3	P0CW19	117 aa		13.23	□□□□□ -0.29
RNF31-208	ENST00000558907	LIMS4	P0CW20	117 aa		13.23	□□□□□ -0.29
RNF31-208	ENST00000558907	JUNB	P17275	347 aa	Predicted RBP	13.23	□□□□□ -0.29
RNF31-208	ENST00000558907	LMO1	P25800	156 aa		13.23	□□□□□ -0.29
RNF31-208	ENST00000558907	GLIPR1	P48060	266 aa		13.23	□□□□□ -0.29
RNF31-208	ENST00000558907	ZP1	P60852	638 aa		13.23	□□□□□ -0.29
RNF31-208	ENST00000558907	AES	Q08117	197 aa		13.23	□□□□□ -0.29
RNF31-208	ENST00000558907	ZSCAN26	Q16670	478 aa		13.23	□□□□□ -0.29
RNF31-208	ENST00000558907	C2orf68	Q2NKX9	166 aa		13.23	□□□□□ -0.29
RNF31-208	ENST00000558907	MINOS1	Q5TGZ0	78 aa		13.23	□□□□□ -0.29
RNF31-208	ENST00000558907	PRAMEF5	Q5TYX0	476 aa		13.23	□□□□□ -0.29
RNF31-208	ENST00000558907	ZNF691	Q5VV52	312 aa		13.23	□□□□□ -0.29
RNF31-208	ENST00000558907	CCBE1	Q6UXH8	406 aa	Predicted RBP	13.23	□□□□□ -0.29
RNF31-208	ENST00000558907	KLHDC1	Q8N7A1	406 aa		13.23	□□□□□ -0.29
RNF31-208	ENST00000558907	FAM110D	Q8TAY7	271 aa	Predicted RBP	13.23	□□□□□ -0.29
RNF31-208	ENST00000558907	STMN2	Q93045	179 aa		13.23	□□□□□ -0.29
RNF31-208	ENST00000558907	CLEC7A	Q9BXN2	247 aa		13.23	□□□□□ -0.29
RNF31-208	ENST00000558907	FGF20	Q9NP95	211 aa	Predicted RBP	13.23	□□□□□ -0.29
RNF31-208	ENST00000558907	ING3	Q9NXR8	418 aa		13.23	□□□□□ -0.29
RNF31-208	ENST00000558907	MINOS1-NBL1	R4GNA1	71 aa		13.23	□□□□□ -0.29
RNF31-208	ENST00000558907	MEGF8	Q7Z7M0	2845 aa		13.23	□□□□□ -0.29
RNF31-208	ENST00000558907		A0A0G2JK05	382 aa		13.22	□□□□□ -0.29
RNF31-208	ENST00000558907		A6NDX4	124 aa		13.22	□□□□□ -0.29
RNF31-208	ENST00000558907	DEGS1	O15121	323 aa		13.22	□□□□□ -0.29
RNF31-208	ENST00000558907	CSF1	P09603	554 aa		13.22	□□□□□ -0.29
RNF31-208	ENST00000558907	VSIG10L2	P0DP72	767 aa		13.22	□□□□□ -0.29
RNF31-208	ENST00000558907	RAB3A	P20336	220 aa		13.22	□□□□□ -0.29
RNF31-208	ENST00000558907	SOX2	P48431	317 aa		13.22	□□□□□ -0.29
RNF31-208	ENST00000558907	SLC34A1	Q06495	639 aa		13.22	□□□□□ -0.29
RNF31-208	ENST00000558907	HIST2H2BD	Q6DRA6	164 aa		13.22	□□□□□ -0.29
RNF31-208	ENST00000558907		Q6P435	159 aa		13.22	□□□□□ -0.29
RNF31-208	ENST00000558907	C11orf44	Q8N8P7	122 aa		13.22	□□□□□ -0.29
RNF31-208	ENST00000558907	DTX3	Q8N9I9	347 aa		13.22	□□□□□ -0.29
RNF31-208	ENST00000558907	HAVCR2	Q8TDQ0	301 aa		13.22	□□□□□ -0.29
RNF31-208	ENST00000558907	RGP1	Q92546	391 aa	Predicted RBP	13.22	□□□□□ -0.29
RNF31-208	ENST00000558907	RDH12	Q96NR8	316 aa		13.22	□□□□□ -0.29
RNF31-208	ENST00000558907	JAM3	Q9BX67	310 aa		13.22	□□□□□ -0.29
RNF31-208	ENST00000558907	CDCA4	Q9BXL8	241 aa		13.22	□□□□□ -0.29
RNF31-208	ENST00000558907	GAL3ST2	Q9H3Q3	398 aa		13.22	□□□□□ -0.29
RNF31-208	ENST00000558907	ZNF702P	Q9H963	129 aa		13.22	□□□□□ -0.29

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