RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 FLT4P35916 1363 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 PTPRMP28827 1452 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 DIP2CQ9Y2E4 1556 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 MROH2AA6NES4 1674 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 ABCA7Q8IZY2 2146 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 CEP152O94986 1710 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 MYO3AQ8NEV4 1616 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 CDK13Q14004 1512 aaKnown RBP2.17□□□□□ -2.06
TRAV28-201ENST00000557548 ARAP3Q8WWN8 1544 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 ZFYVE9O95405 1425 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 UACAQ9BZF9 1416 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 ASTN1O14525 1302 aa2.17□□□□□ -2.06
TRAV28-201ENST00000557548 ZC3H13Q5T200 1668 aaKnown RBP2.16□□□□□ -2.06
TRAV28-201ENST00000557548 ARHGAP23Q9P227 1491 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 ROCK2O75116 1388 aaKnown RBP2.16□□□□□ -2.06
TRAV28-201ENST00000557548 IGLV3-10A0A075B6K4 115 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 IGHV2OR16-5A0A0B4J2B6 119 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 INS-IGF2F8WCM5 200 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 PSMD12O00232 456 aaPredicted RBP2.16□□□□□ -2.06
TRAV28-201ENST00000557548 RAD1O60671 282 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 IGLV1-47P01700 117 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 BCHEP06276 602 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 CTSLP07711 333 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 ZNF17P17021 662 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 PSMA1P25786 263 aaKnown RBP2.16□□□□□ -2.06
TRAV28-201ENST00000557548 RPA3P35244 121 aaPredicted RBP2.16□□□□□ -2.06
TRAV28-201ENST00000557548 SSTR5P35346 364 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 TAS2R31P59538 309 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 RANP62826 216 aaKnown RBP2.16□□□□□ -2.06
TRAV28-201ENST00000557548 TFAMQ00059 246 aaKnown RBP2.16□□□□□ -2.06
TRAV28-201ENST00000557548 NDPQ00604 133 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 CD164Q04900 197 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 ERCC8Q13216 396 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 TRAM1Q15629 374 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 TRIP13Q15645 432 aaPredicted RBP2.16□□□□□ -2.06
TRAV28-201ENST00000557548 ZNF79Q15937 498 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 ZNF239Q16600 458 aaKnown RBP2.16□□□□□ -2.06
TRAV28-201ENST00000557548 TBC1D28Q2M2D7 210 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 RNF212Q495C1 297 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 ORMDL2Q53FV1 153 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 OR10J3Q5JRS4 329 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 FBXW9Q5XUX1 488 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 HBMQ6B0K9 141 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 S100A7AQ86SG5 101 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 RIMKLAQ8IXN7 391 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 LGI3Q8N145 548 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 ATPAF2Q8N5M1 289 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 OR8G5Q8NG78 346 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 OR1M1Q8NGA1 313 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 OR51D1Q8NGF3 324 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 OR10G4Q8NGN3 311 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 OR5P2Q8WZ92 322 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 LZICQ8WZA0 190 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 RAB8BQ92930 207 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 RBP7Q96R05 134 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 VAT1Q99536 393 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 PHB2Q99623 299 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 SDHCQ99643 169 aaPredicted RBP2.16□□□□□ -2.06
TRAV28-201ENST00000557548 GPR22Q99680 433 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 DHRS9Q9BPW9 319 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 TMEM208Q9BTX3 173 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 CHAC1Q9BUX1 264 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 DDA1Q9BW61 102 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 ACOT13Q9NPJ3 140 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 INIPQ9NRY2 104 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 TMEM100Q9NV29 134 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 PARVAQ9NVD7 372 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 NYAP2Q9P242 653 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 SIGLEC9Q9Y336 463 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 LTBP4Q8N2S1 1624 aa2.16□□□□□ -2.06
TRAV28-201ENST00000557548 KDM5CP41229 1560 aa2.15□□□□□ -2.06
TRAV28-201ENST00000557548 ATP10BO94823 1461 aa2.15□□□□□ -2.06
TRAV28-201ENST00000557548 PRXQ9BXM0 1461 aa2.15□□□□□ -2.06
TRAV28-201ENST00000557548 PALLDQ8WX93 1383 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 TRAV8-4A0A0B4J246 113 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 IGKV3D-20A0A0C4DH25 116 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 FAM240AA0A1B0GVK7 77 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 ISPDA4D126 451 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 ZNF729A6NN14 1252 aaPredicted RBP2.15□□□□□ -2.07
TRAV28-201ENST00000557548 F5H5T6 163 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 LINC01619G3V211 115 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 M0R1B8 84 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 ZNF593O00488 134 aaPredicted RBP2.15□□□□□ -2.07
TRAV28-201ENST00000557548 FABP7O15540 132 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 SYNGR1O43759 233 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 ENTPD6O75354 484 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 SRSF10O75494 262 aaKnown RBP2.15□□□□□ -2.07
TRAV28-201ENST00000557548 PTHP01270 115 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 IFNA21P01568 189 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 P01737 135 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 MT-ND4P03905 459 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 TYMSP04818 313 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 OR5AL1P0C617 328 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 SLC35G6P0C7Q6 338 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 HIST1H1EP10412 219 aaKnown RBP2.15□□□□□ -2.07
TRAV28-201ENST00000557548 TCN2P20062 427 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 HTR1DP28221 377 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 TALDO1P37837 337 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 CCR6P51684 374 aa2.15□□□□□ -2.07
TRAV28-201ENST00000557548 DLX6P56179 175 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms